Oryzias melastigma (Indian medaka): 112149704
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Entry
112149704 CDS
T07439
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b
KO
K09381
paired box protein 3/7
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112149704 (pax3b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112149704 (pax3b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_32
Homeobox_KN
HTH_23
DUF7788
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112149704
NCBI-ProteinID:
XP_024133348
Ensembl:
ENSOMEG00000000845
LinkDB
All DBs
Position
LG13:complement(19920425..19944194)
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AA seq
492 aa
AA seq
DB search
MTALAGSVPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKGTPPDVERRIEEY
KREHPGMFSWEIRDKLLKDGMCDRNNVPSVSSISRMMRSKFGGKGDEEEDEEEIEKKEQE
DSERRTKHSIEGILGDRSSHSDDGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFER
THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQMMAFNHLIPGGFPASAMS
SIPPYQLSDSAYPPSSIAQVSEPPSTVHRPQPLPPSSSHQASAGGGQGEGGSAYCLSSGR
HSFSGYSDSFVSPGGPSNPTIGNGLSPQVMGLLNPGGVPHQPQSDYAISPLTGGLEPPTG
MAASCSQRMDHIKGLEGLTSVPSMSALPSLPSSQSYCPPSYSSQGYTVDHVASYQYSQYA
QSALPYLRPEIT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttagcggggtcggtacccaggatgatgcgacccacgctggcccagaactac
ccccgcagcggcttccccctggaagtgtccaccccgctgggtcaaggccgagtcaaccag
ctcggaggagtcttcatcaacggcagacctttgcccaaccacatccgccacaagatcgtg
gagatggcccaccacgggatccggccgtgcgtcatttcccgacagctccgcgtctcccac
ggctgcgtgtccaaaatcctgtgccggtaccaggagacgggttctatccgacccggagcc
atcggaggcagcaaacccaagggaaccccgccggacgtggagaggagaatagaggagtac
aagcgggaacacccgggtatgtttagctgggagattcgggataaattactgaaggatggg
atgtgtgaccgcaacaacgttccctcagtgagctccatcagtcgcatgatgcggagtaaa
tttggaggcaagggcgatgaagaggaggatgaagaggagatcgagaagaaagagcaggag
gacagcgagcggaggaccaaacacagcatcgagggaatcttaggagacagatctagccat
tcagacgacggttcggatgttgagtcggaaccggatttgccactgaaaagaaagcagcgg
cgcagtcggaccacctttaccgcagagcagctggacgagctggagagggccttcgagagg
acacactatcctgacatctacaccagggaggagctggctcagagggccaagctcactgaa
gccagggtgcaggtttggtttagcaacagaagagcgaggtggaggaaacaagctggagcc
aatcaaatgatggcgtttaaccacctgatcccgggaggtttcccagcctcagccatgtcc
agcatcccaccctaccagctctccgacagcgcctaccctccctcatccatcgcacaagtg
tcggagccacccagcacagtgcaccgtccccagcctctgcccccctcctccagccaccaa
gcctccgccggtggaggtcagggagaaggaggctctgcctactgcctctcctctggacgc
cactccttctccggctattcagacagcttcgtgagccctggaggaccaagcaaccccact
ataggaaatgggctctccccacaggtgatgggtctcctaaaccccggcggggttccgcat
caaccccaaagcgactacgccatctccccgctgacgggtggcctggaaccccccaccggc
atggcggccagctgcagccagcgcatggaccacatcaagggtttggagggtctcaccagc
gtaccctccatgtcggctctgccctctctgcccagctcgcagtcttactgccccccctcg
tacagctcacagggctacaccgtcgaccacgtggcgtcctaccagtacagccagtacgca
caaagtgcccttccttatctgaggcctgaaatcacctga
DBGET
integrated database retrieval system