KEGG   Oryzias melastigma (Indian medaka): 112149721
Entry
112149721         CDS       T07439                                 
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112149721 (hnrnpul1)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112149721 (hnrnpul1)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    112149721 (hnrnpul1)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     112149721 (hnrnpul1)
SSDB
Motif
Pfam: AAA_33 SPRY SAP
Other DBs
NCBI-GeneID: 112149721
NCBI-ProteinID: XP_024133376
Ensembl: ENSOMEG00000021915
LinkDB
Position
LG13:2915075..2937055
AA seq 866 aa
MSLDVKKLKVNELKDELQRRGLDTRGLKADLVERLKAALEAEAEGDAGEQEPQDELSEDF
QDNEDGDDAQEQQEAAEDYGDEDAEGDTPQGEEEGGDSGGYYEEEEAEAEAGEPQQAPDS
GLPMPDFTADDDLQGSSMTFEEAAQPQIKVEAAAVEAAAEEEEEEQHARSTQEVKVEVKA
EDDAEPAERREDAQTEQQPAPEQVKVEGERSGSSSRKRHYDESRGYSYYEHREDKRSRTP
QPPAEDEEEGVDDTLITIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWAGARATHGVAKG
RVCFEMKINEEIQVKHLPSSEPDPHVVRIGWSLDHCSTQLGEEPFSFGYGGTGKKSSDCK
FADYGEKFGENDVIGCYIDFESGDEVEIGYSKNGVNLGVAFRTTKEALAGRALFPHVLVK
NCAVEFNFGQKREPYFPPMEGYTFIHNLSLEEKIRGSKGPATKSDCEILMMVGLPACGKT
TWAIKHAEANPKKKYNILGTNAIMDKMKVMGLRRQRNYSGRWDVLIQQATQCLNRLIEIA
ARKRRNYILDQTNVYGSARRRKMRPFEGFQRKAIVICPTDEDFKERTLKQTNEQGKDVPD
HAVLEMKANFTLPEPCDFLEAVTFVELQRDEADKLLKQYNEEGRKAGPPPEKRYDNRQGG
FRGRGSSSYQRYDNRDGSRGSYQSRSGDSGGGYRGGYNRGNYNQNRWGNSYRDGGSDNRG
SYNRSQQSPGSYNRSSSSSSSSSSSYNKGGYNQGYSQSYNQGYNQGSYNQNYYGNYSQYP
GYSQSYSQPAAPAQTYSHHQQQQAPPPPAQQAPAPQQQQQQSYNQQYQQYAQQWQQYYQN
QNQWNQYYSQYGGYPGQSSQGSSGSQ
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgagtttagacgtgaagaaactgaaagtgaacgagctaaaggatgagctccagcgccgc
ggcctcgacacccggggcctgaaggctgacctggtggagaggctgaaagccgctctggag
gctgaagctgagggggatgctggagagcaagaaccgcaagatgagctcagcgaggacttc
caggacaacgaggacggagatgacgctcaagagcaacaagaagcagctgaagactatggt
gatgaagatgcagaaggtgacacccctcaaggggaagaagaaggcggagactccggtggc
tactatgaggaagaggaggcagaagcggaggccggcgagccccagcaggcgcccgactcg
ggtctccccatgcccgacttcaccgctgacgatgatttgcaggggtcaagcatgaccttt
gaggaagctgcccaaccacagataaaagtggaggcggcggcggtggaggcggcagcggag
gaggaggaggaagagcagcatgccaggagcacacaagaagtcaaagtggaagtcaaagct
gaagatgacgccgagccggccgagagacgggaggacgctcagacggaacagcagccggca
ccagagcaggtcaaggtggagggggaacgatcggggagctctagccgcaagagacactac
gatgaaagcagaggatacagctactacgagcaccgggaggacaagagatcccgaacacca
cagcctccagctgaagacgaggaggagggcgtagacgacactctgattaccatcgacaca
tacaactgtgacttgcatttcaaagtttcccgagatcgttacagcggttatccgctcacc
attgaaggcttcgcttacctgtgggcgggagcgagggcgactcacggcgtcgccaaaggc
cgcgtgtgttttgagatgaagatcaacgaagaaattcaagtgaagcatcttccctccagt
gagcccgacccccacgtggtcagaatcggatggtccctggaccactgcagcactcagctg
ggtgaggagcctttttcctttggatacggaggaactgggaagaagtccagcgactgcaag
tttgcagactacggcgagaagtttggtgaaaatgacgtcatcggctgctacatcgacttt
gaaagtggcgacgaggtggagatcggttactccaagaacggagtaaatttgggcgtggct
ttccggacgacgaaagaggccctggcaggacgcgcactgttcccacacgtgctggtgaag
aactgtgcagtcgagttcaactttggacagaagcgggagccgtacttccccccgatggag
ggctacaccttcatccacaacctgtctttggaggagaagatccgaggctcgaagggacct
gccaccaagtccgactgcgagattttaatgatggtgggacttcctgcctgtggaaaaacc
acatgggccataaagcacgccgaggcaaacccgaagaagaaatacaacatcctgggcacc
aacgccatcatggataagatgaaggtgatgggtctgcgccgccagaggaactactccgga
cgctgggacgttctcatccagcaggccacccaatgtctgaacaggctgatcgagatcgcc
gcccgcaagaggcgcaactacatcctggatcagacaaatgtttatggatcagcaaggaga
cgaaaaatgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacggac
gaggattttaaagaacgaacattaaagcaaaccaatgagcaggggaaggatgtgcccgat
catgctgtgttagaaatgaaagctaacttcactctgcccgagccttgcgacttcctggag
gccgtgaccttcgtggagctgcagcgcgacgaagccgacaagctgctgaagcagtacaac
gaggagggccgcaaggccggcccgccccccgagaaacgctacgacaacaggcaggggggc
ttccgcggccgcggcagcagcagctaccagcgctacgacaaccgcgacggctcccgcggc
agctaccagagccgcagcggagactccggaggcggctacagaggaggctacaaccgcggc
aactacaaccagaacagatggggcaacagctaccgtgacgggggctctgacaaccgcggc
agctacaaccgcagccagcagtccccagggagctacaaccgctcctcctcctcttcctcc
tcctcctcctcctcctacaacaagggaggatacaaccagggctacagccagagctacaac
caaggctacaaccaaggcagctacaaccagaattactatggcaactacagccagtacccg
ggctacagccagagctacagccagccggccgcccccgcacagacgtacagccaccaccag
cagcagcaggcgccgccgccgccagcacagcaggcgccggcgccacagcagcagcagcag
cagagctacaaccagcagtaccagcagtacgctcagcagtggcagcagtactaccagaac
cagaaccagtggaaccagtattacagccagtacggcggctatcctggtcagagcagccaa
ggctcctctggttcccagtag

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