Oryzias melastigma (Indian medaka): 112149749
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Entry
112149749 CDS
T07439
Symbol
pld3
Name
(RefSeq) 5'-3' exonuclease PLD3
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00564
Glycerophospholipid metabolism
oml00565
Ether lipid metabolism
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112149749 (pld3)
00565 Ether lipid metabolism
112149749 (pld3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149749 (pld3)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
112149749 (pld3)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
112149749 (pld3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
112149749
NCBI-ProteinID:
XP_024133427
LinkDB
All DBs
Position
LG13:complement(3612408..3621141)
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AA seq
487 aa
AA seq
DB search
MKTDIPYNQLEDLDWNRRGASRRTPQVSRWLLPLVSVLFGLLAAMSFYFLLTLAVASSSS
SVPDQSSPIISGLQEDQTCSDSCRIVLVESIPVGVEFNSSTSHPSIFQAWMSLMSEARSS
VDIASFYWTLTNRDTGTQEPSAVQGETVLQTLSELSGKLKVRIAVNTPQEKQREDLRLLN
DSGADIRMVNMKALTSGVLHTKFWIVDKKHVYIGSANMDWRSLTQVKELGAMVYNCSCLA
EDLGKIFEAYWFLGASQSIPSPWPPSFSTQFNKDTPLQLALNDTPSSVYLSSSPPSFCAA
GRTPDLQSILSVMEDAESFIYIAVMNYLPTMEFSRPQRYWGDIDTQLRRLAYERKIKVRL
LISCWPNSQPVMFPFLKSLASVYDPKSKLDIQVRLFVVPPNPGPEIKYARVNHNKYMVTD
KVAYIGTSNWSGDYFLHTAGSALVINQTESRSEAPTVQAQLQAVFERDWESEYSTPLTHS
SDRTDFC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggacattccctacaaccagctggaggatttggactggaaccggagaggagcg
agcagacgaacgccgcaggtttccagatggttgctccctctggtctcagtgctcttcggg
cttctggctgctatgagtttctacttcctcctgaccctggcggtcgcctcttcctcctcc
tccgttcctgatcagtcttctccaatcatcagtggccttcaggaggatcagacctgctca
gactcttgcaggatcgttctggtggagagcatcccggtgggtgtggagttcaactccagc
acctcccacccctccatcttccaggcgtggatgagcctgatgagcgaggcgcgcagcagc
gtggacatcgcctccttctactggacgctgaccaacagggacacggggacgcaggagccc
tcagccgtgcagggagagacggtcctgcagacgctgagtgaactatcagggaagctgaaa
gttcggattgcagtgaacacaccgcaggagaaacagcgagaagacctgaggctcctgaac
gactcgggagctgacatcaggatggtcaacatgaaggctctcacctccggcgtcctccac
accaagttctggattgtagacaagaagcacgtctacatcggcagcgccaacatggactgg
aggtcgctcactcaggtgaaggaactgggcgccatggtctacaactgcagctgtctggct
gaagacctgggtaagatctttgaagcgtactggtttctgggggccagtcagtccatcccg
tctccgtggccccccagcttctccacccagttcaacaaggacacgcccctccagctggcc
ctcaacgacacgccgtccagcgtttatctgtcgagctccccgccgtccttctgtgccgcc
ggcaggacgccagacctgcagtccatcctcagcgtgatggaggacgccgagagcttcatc
tacatcgctgtcatgaactacctgcccaccatggagttttctagaccgcaaaggtactgg
ggcgacatcgacacgcagctgcggcggctggcctacgagaggaagatcaaagttcgtctg
ctgatcagctgctggcccaactctcagcccgtcatgtttcccttcctgaagtctctggct
tccgtttacgaccccaagagcaaactggacatccaggtgaggctgttcgtggtgcctcca
aaccccggaccggagattaaatacgccagagtgaaccacaacaagtacatggtgacggat
aaggtggcatacatcggaacatccaactggtcgggggattactttctgcacacggcgggc
tccgcgctggtcatcaaccagaccgagtcccggtccgaggcgccgaccgtccaggcccag
ctgcaggctgtgtttgagagggactgggagtcggagtacagcacccccctgacccacagc
tcagaccgcacagacttctgctag
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