Oryzias melastigma (Indian medaka): 112149760
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Entry
112149760 CDS
T07439
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4 isoform X3
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112149760 (rhbdd1)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
112149760 (rhbdd1)
Peptidases and inhibitors [BR:
oml01002
]
Serine peptidases
Family S54: Rhomboid family
112149760 (rhbdd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
Motif
Other DBs
NCBI-GeneID:
112149760
NCBI-ProteinID:
XP_024133453
Ensembl:
ENSOMEG00000000609
UniProt:
A0A3B3CTI1
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All DBs
Position
LG13:complement(3552277..3564784)
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AA seq
316 aa
AA seq
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MRGRERRSHLGLLLLASQVFQVGLDRIPPVTLAVMALNVYLYLFPAAPLMKTCISVHQAY
HYKDWRRLLLSPVHHADDLHLYFNMVSFLWKGIRLERRLGGAWFLYLLSVFSLLTGCVYL
LLEGLLTELTQDSSHSAACAVGFSGVLFALKVLSNHYHPGGVTYVMGFPVSNRYVSWVEL
VLIHITSPGTSFVGHLAGILVGLLYTAGPLKTLMKKCAEFVNTSGQSSHAGPAFSGSGYS
GFAGGRSGNFQPPPPYTASYTGGLTEEEQLEAAIRNSLNDRGQNYQRGAPPPYGFNLPNE
PTDDELRWRRLRRFDS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtcgagagaggaggtcccacctggggctgctgctcctggcctctcaggtgttc
caggtgggcctggacaggatcccccccgtcactctggccgtcatggccctcaacgtgtac
ctttacctattccctgcggcccccctcatgaagacctgcatcagcgtacatcaagcgtat
cattataaagactggcgccgactcctgctgtcccccgtgcaccacgccgatgacctacac
ctttacttcaacatggtgtccttcctctggaaggggatccggctggagcggcggctgggg
ggggcatggttcctctacctgctgtccgtcttctctctgctcaccggatgcgtttatctg
ttgctggagggcctgctgacggagctgacccaggattcgtcccacagcgcggcgtgcgct
gttggtttctcaggtgtcctatttgctctgaaggtgctcagtaaccattaccatcctgga
ggagtgacctacgtcatgggcttccccgtctccaaccgctacgtcagctgggtggagctt
gtactgatccacatcacttcccccggaacctcttttgttggtcacctggcaggaattctg
gtgggtttgctctacacggccggtccgctgaagaccctcatgaagaaatgtgcagagttt
gtgaacacgagtggacaaagttctcatgccggcccggccttcagcggctcaggttacagc
ggcttcgcaggaggacgctcaggaaacttccagcccccgccgccatacacggcgtcctac
acgggagggctgacagaggaggagcagctggaggcggccattagaaacagtctgaatgac
agaggacaaaactaccagagaggagcgccaccgccgtacggcttcaacctgcccaacgag
ccgacagacgacgagttgcggtggaggaggctgaggaggttcgacagctga
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