KEGG   Oryzias melastigma (Indian medaka): 112149777
Entry
112149777         CDS       T07439                                 
Symbol
cldne
Name
(RefSeq) claudin e
  KO
K06087  claudin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03272  Virion - Hepatitis viruses
oml04382  Cornified envelope formation
oml04514  Cell adhesion molecules
oml04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    112149777 (cldne)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112149777 (cldne)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112149777 (cldne)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    112149777 (cldne)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oml03037]
    112149777 (cldne)
   04147 Exosome [BR:oml04147]
    112149777 (cldne)
   04515 Cell adhesion molecules [BR:oml04515]
    112149777 (cldne)
Cilium and associated proteins [BR:oml03037]
 Other cilia and associated proteins
  Stereociliary proteins
   112149777 (cldne)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   112149777 (cldne)
  Exosomal proteins of colorectal cancer cells
   112149777 (cldne)
Cell adhesion molecules [BR:oml04515]
 Immunoglobulin superfamily
  L1 family
   112149777 (cldne)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF4153 TMEM37
Other DBs
NCBI-GeneID: 112149777
NCBI-ProteinID: XP_024133481
LinkDB
Position
LG13:3347827..3349431
AA seq 223 aa
MVSMGRQMLGFVLGIIGFMGTILVCALPMWKVTAFIGANIVTAQIIWEGLWMNCVMQSTG
QMQCKIYDSLLALPQDLQAARALVVIAIIVSVLGVILSVAGGKCTNFISEERGKARVVIA
AGVVFICAGVLVLIPVCWSANTIIRDFYNPIMTNAQRRELGAALYVGWGTAALLILGGAL
LCSSCPPKNESPEYPVNYGAPRSQGAPKSYISQKSYDASRAYV
NT seq 672 nt   +upstreamnt  +downstreamnt
atggtgtcaatgggacgtcagatgctgggctttgtcctcggcatcatcggcttcatgggg
accatcttggtgtgcgccctccccatgtggaaagtgaccgccttcattggagccaacatc
gtcacggcgcagatcatctgggagggcttgtggatgaactgcgtgatgcagagcacaggt
cagatgcagtgtaagatctacgactccttgctggcgctgccgcaagatctgcaagccgct
agggccctcgtggtcatcgctatcatcgtgtccgttttgggagtcatcctttccgtcgct
ggggggaagtgcaccaacttcatctcggaggagcgtggcaaagctagagtggtcatcgcc
gcaggggttgtcttcatctgtgctggcgttcttgtcctcatcccagtgtgctggtctgct
aacaccatcatcagggacttctacaaccccatcatgaccaacgctcagaggagggagctg
ggggctgctctctacgtaggctggggcactgctgctctcctcatcctgggcggggccctt
ctctgcagctcatgcccacccaagaacgaaagcccagagtatccagtcaattacggtgca
cccaggtcccaaggagcacccaaatcctacatctcacagaagtcctacgatgccagccga
gcctacgtctga

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