Oryzias melastigma (Indian medaka): 112149852
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Entry
112149852 CDS
T07439
Symbol
cntn5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112149852 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112149852 (cntn5)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Contactins
112149852 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112149852 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_5
Ig_C17orf99
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn3_4
Interfer-bind
DUF2934
Motif
Other DBs
NCBI-GeneID:
112149852
NCBI-ProteinID:
XP_024133577
Ensembl:
ENSOMEG00000001385
UniProt:
A0A3B3CWS2
LinkDB
All DBs
Position
LG13:6494156..6635365
Genome browser
AA seq
1092 aa
AA seq
DB search
MGSPWKPFLILSVISGLSDFARAVAARPISYAAVLRMKQDSSLSVLTPRSRPSHRHSGGL
GNPGWPAFSILPPSALTLLSSQEDHRSEESLEFGPVFIQEPDDIIFSLGSGERKVMLHCE
ARGNPPPTYSWYINGTRVDSDTDYRYSFIDGDLIITNASEITDFGKYQCKSENSFGSILS
RDALLQFAYLGAFSTKSRGAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSR
RFISQDTGNLYISKVQPSDVGSYICLVKNPVTNARVLSPPTPLTLKTDGVMGEYEPKIEV
HFPTSVLAAKGVTVRLECFALGNPVPTITWRKINGNIPKRVRLRKSQAVLEIPNIQQDDS
GVYECKAENPRGGTAFKGHLQVYTLPQWVRMINDTQMDSGEKLQWECKAISRPRPTYRWL
RNGLPLASQGRVEIMNGELSIHKVQQTDSGMYQCVAENKYGAVYSNAELKILASAPVFFQ
NPVRVIATLGKDAYLECKPRASPKPRITWKREDRRIQPSKRIILLRNNTLKIVNSSRADE
GNYVCRAENQLGSAELTAVLWVKEAMRVVLSPSKVEVTVGESVVLSCKATHDTSLDVAFQ
WFFNQKPIVFQQDGNHFEYIQTVRAKQSSTVDLMIRSILLRHAGKYGCRAQTSADSVFTE
AELLVRGPPGPPGVVIVEEITDHTATLSWTRGLDNHSPISTYNLQARSPFSLGWQTVKTD
PDPVTGDMESAMAVELNPWVEYEFRVVASNAIGTGDPSAPSRRVRTKEAVPSVAPSNVSG
GDGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYRDETFP
PLTPFEVKVGVYNNKGDGPFSQVVIIHSAEGEPREPPSDVKAYSTSSSEIRVAWKPPSPG
PGKPKGYEVQFWKEAEQEESGKKQRTMKNETFMILTGLDGNSQYLITVKGFNNIGQGPAC
AAIKARTKKFPPAQPPVNLAWIQEGNNVSLSWDPVKAKDNESDVIGYMVLVKQEGRGYNQ
VTRTINPSTVLSLPEGGTYIIEVRSLSEGGEGAASSQIRLVTSSGVRAKSGQCSVHRTSL
TWTALLLVLLVP
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccatttctcatcctgtctgtcatcagtggcctttcagacttt
gccagagctgttgcagcacggcccatttcttatgcagccgtgctacggatgaagcaggac
agctccttgtcggtgctcacgccacgcagcagaccttcacaccgccacagcggtggtctg
gggaatcctggctggcctgctttttccattctacctccgtctgctctgactttgctcagc
tctcaggaggaccacaggagtgaagagagcctggagtttggccccgttttcatccaggag
ccagatgacattattttttctttgggttctggtgaaaggaaagtgatgctgcactgcgag
gcgcggggaaacccacctcccacatacagctggtacattaatgggaccagagtggactca
gacacagactacagatacagcttcatcgatggagacctaatcatcaccaatgccagcgag
atcaccgactttgggaaataccagtgtaaatcggagaacagctttggaagtattctcagt
cgagatgctctgctacagttcgcttatctgggggctttcagtacaaagagcagaggagct
gtgtctgtgcgagaaggccaaggtgtggtgctcatgtgcagccctcctcctcattctcca
gagataatctacagctgggtgtttaatgagtttccctcctttgttgctgaggacagtcgg
cgcttcatctcccaggacacagggaacctgtatatctccaaggtgcagccctcagatgtt
ggaagctacatctgtctggtgaagaacccagtgacaaatgcaagagttttgagtccacca
actcctctgaccctgaaaactgacggtgtcatgggtgaatacgagcccaaaattgaagtg
catttccctacgtcggttctggcggctaaaggagtgactgtcaggctggagtgctttgct
ctggggaacccggtgccgacaattacatggaggaagataaatggcaacattcccaaaaga
gtccgacttcggaagtcccaggccgtattagagattcccaacattcagcaggatgattca
ggagtttacgaatgcaaagctgagaatccgagaggaggaactgctttcaaagggcatctg
caggtctacactcttcctcagtgggttagaatgattaatgacactcagatggatagcgga
gagaaactccagtgggagtgcaaggccatctcgaggccgcggcccacctatcgctggctt
cgtaatggtctgcccttggcatcccagggtcgagtggaaataatgaatggggagttgtcc
attcacaaagtgcagcagacggattccgggatgtaccagtgtgtggcagaaaacaaatac
ggggccgtctactctaatgcggaactcaagattttggcatcagcacccgtctttttccaa
aaccctgtccgggtcatagccacgctgggaaaagatgcgtacctggaatgcaaaccgaga
gcatcgcccaaaccccgaatcacatggaagagagaagacagaaggatacagccaagcaaa
aggattattctgttacggaacaacactctgaaaattgtcaactccagccgagcagatgaa
gggaactatgtgtgccgggctgagaatcagttgggctcggccgagctgacggccgtactg
tgggtaaaagaggccatgcgtgtggtgctgagccccagcaaagtggaggtgaccgtgggg
gagagcgtggtcctgagctgcaaggcgacgcacgacacatccctggatgtggctttccag
tggttcttcaaccagaaacccatcgtcttccagcaggacggaaaccactttgagtacatc
caaacagtgagagcaaaacagtcgtccaccgtggatctgatgatcaggagcattctgctt
aggcatgctgggaagtatggatgcagagcgcagaccagtgctgactctgtgtttacggag
gctgaacttcttgtgcgaggccctcctggaccccctggagttgtgatcgtggaggagatc
acagaccacacagctaccttgtcttggacgcggggtctggacaaccacagccccatcagc
acctacaatttacaagccaggagcccgttctcattaggctggcaaactgtcaaaacagat
ccagacccagtcaccggggacatggagtcggccatggccgtggagctcaacccctgggtg
gaatacgagttccgagttgttgccagcaacgccattggaaccggcgatccgagcgcacct
tcaagacgtgttaggactaaggaagcagtgccatcagtggcgccatccaacgtgagtggg
ggcgatggccgaaggcatgaactggtcatctcgtgggagcccgtatcagaagaattccaa
aatggtgagggcttcgggtacattgtcgcctttcgagccaacggcactcgaggctggaag
gagaagatggtgacctcagcggactccaccacgtacaaatacagagacgagaccttccct
ccgctgactccatttgaagtgaaagtgggcgtgtacaacaataaaggggacggccctttc
agccaagtggtcatcatccattctgcggaaggagagccaagagagccaccgtccgacgta
aaagcttacagcacttcgtcatcggaaatcagagtggcctggaaaccgccgagtccaggg
cctggaaaacccaaaggatacgaggttcagttttggaaagaagcggagcaggaagagtct
ggaaaaaaacagcgtacaatgaaaaacgagaccttcatgatcctgacgggcctggacggg
aacagtcagtatctcatcacggtcaaagggttcaacaacattggtcagggtcccgcctgt
gctgccatcaaagccaggaccaagaaattccctccagctcagcccccggtgaacctcgcc
tggattcaagagggaaacaatgtttccttaagctgggatccagtcaaagcgaaagacaac
gaatctgacgtcatcgggtacatggtgttggtgaaacaagagggccgtggctacaaccag
gtgacacgaaccattaacccgtccaccgtgctctcactgcccgagggaggcacttacatc
attgaggtgcgctcgctcagcgaagggggggagggagccgccagctcccaaattcgactt
gtcacctcctccggcgtccgagccaaaagtgggcagtgctccgtgcaccgaacgagccta
acgtggaccgcactgctcctggttctcctggtgccttga
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