Oryzias melastigma (Indian medaka): 112149943
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Entry
112149943 CDS
T07439
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03440
Homologous recombination
oml03450
Non-homologous end-joining
oml04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112149943 (mre11a)
03450 Non-homologous end-joining
112149943 (mre11a)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112149943 (mre11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112149943 (mre11a)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112149943 (mre11a)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112149943 (mre11a)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112149943 (mre11a)
BRCA1-C complex
112149943 (mre11a)
NHEJ (non-homologous end-joining)
MRX complex
112149943 (mre11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF4194
SLED
Motif
Other DBs
NCBI-GeneID:
112149943
NCBI-ProteinID:
XP_024133721
Ensembl:
ENSOMEG00000014601
UniProt:
A0A3B3DLX6
LinkDB
All DBs
Position
LG13:complement(16377393..16383754)
Genome browser
AA seq
691 aa
AA seq
DB search
MSSENTLDDEDTFKILIATDVHLGYLEKNAIRGNDTYQTFEEILQCAKKNKVDFILLGGD
LFHDNKPSRRSLHICTTLLRKYCMGDSPVTFNILSDQTTNFNTTQFPWVNYQDENLNISI
PVFSIHGNHDDPTGAESLCALDLLSAAGLVNHFGHSHSVEKIEISPILMQKGSTKLALFG
LGSIPDERLYRMFVNNQVSMLRPKEDQDDWFNLFTIHQNRNKHGPTNYIPEQFLDDFLDL
VVWGHEHECLITPTRNEQQLFYVTQPGSSVATSLSPGEATKKHIGLLRVKGRKMNLQKIP
LKTVRQFIIQDVVLADYEDLFTPNTHQVTKKVEDLCNAKVTEMLEEAERERLGCPLTPEK
PLIRLRVDYSGGFEAFNTSRFSQKFVDCVANPKDIIHFMRRREQKMDNKDEMNVDYSKLV
KTVAVEGLRVEDLVKQYFEAAEQKVQLSLLTEQGMGKAIQEFVDKDEKDAIEELIRYQLE
KTQRHLQSRGVTTEQDIDMEVQRFRDSKKNTAEEENEIKEAMNRAKAHRIERDDDPEDEL
ADVALDSDDNSVPSPAPTRGRGRGGRGRGGRGRGRGTTASEPKPAGRAGSRKSAATSQSK
SIMQAFQPPSQRFFSKVSTSSAAEEITIDDSDEDIPATKVTKPPSRSSSSSASFSKYGSQ
SQSQSFRGVAFEDSDDEEDNPFKGPSHRSGR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagaaaatacactggatgatgaggatacctttaagatcctaattgctacagat
gttcatctgggctacctggagaaaaatgccattcggggcaatgacacctaccaaacattt
gaggaaatccttcagtgtgcaaaaaaaaataaagtggatttcatcctgctggggggagat
ttgtttcatgacaacaagccatcccgccgaagcctccacatctgcaccacactgctgaga
aaatactgcatgggagattcgcccgtgacctttaatattctcagtgaccagaccaccaac
tttaacaccacccagtttccctgggtgaattatcaggatgaaaatctgaacatatccatc
ccagtcttcagcattcatggcaatcacgatgatccaactggcgctgaaagtctgtgtgct
ctggatctgctcagtgcagccggtctcgtgaaccactttggtcactcacactcagtggag
aagattgaaatcagtcccatcctgatgcagaaaggcagcaccaaactggctttatttggt
ctcggttcaattccagatgagcgattgtacagaatgtttgtcaacaaccaggtttccatg
ctccgccccaaagaagaccaggatgactggtttaatcttttcacaatccaccagaacagg
aacaagcacggtcccacaaattacattcctgagcaattcctggatgacttccttgacctg
gtggtgtggggccacgagcacgaatgcttgataacgccaaccagaaatgagcagcagctc
ttctacgtgactcagcctggaagctctgtggccacctccctgtcgcctggagaggccacc
aaaaaacacataggcctgctcagagtgaagggtcggaagatgaacctgcagaagattccc
ttgaaaactgtgcgtcagttcatcattcaggatgtggtgttggctgactacgaagacctt
ttcactcctaacacacaccaggttacaaagaaggtggaggatttgtgcaatgcaaaggtc
acagagatgttagaagaagctgagagggagagactcggctgtccactcacaccagagaaa
cctttaatccgtcttagagtggactacagtggaggtttcgaggcgttcaacacgtctcgc
ttcagtcagaagtttgtggactgcgtagcaaacccgaaagatattattcactttatgaga
cggcgtgagcaaaagatggacaacaaagatgagatgaatgtagattatagcaaacttgtg
aagacagttgcagttgaaggactgagggtggaggacctggttaaacagtactttgaggca
gctgagcagaaggtgcaactctccctgctgactgaacaaggcatgggaaaagccatccag
gagtttgtagacaaagatgagaaagatgccatcgaggagctgatcaggtaccagttagag
aagacacaacgccaccttcagtccagaggagtaactacagagcaggacattgatatggag
gttcagcgatttcgagactccaaaaagaacacagcagaagaagaaaacgagatcaaagaa
gctatgaacagagccaaagctcacagaatagaacgcgatgacgatcctgaagatgaactt
gctgatgttgctctggactctgatgacaattcagttccatctccggctcccacacgcggc
cgaggtcgaggaggccgagggcgaggtggcagaggaaggggcaggggcacaacggcatct
gaaccaaaaccagctggtcgagccggttcccgcaaatctgcagcaacaagtcaaagcaag
agcatcatgcaggcttttcaacctccatcccagagattttttagtaaagtctcaacatct
tcagcagctgaagaaataaccattgatgactcagatgaagatataccggcaacgaaagtt
actaagccaccctccagatcctcatcctcgtctgcatccttctccaagtacggctctcag
agccagagccagtcctttcgaggagttgcatttgaggacagtgatgacgaggaggacaac
ccatttaaaggccccagccatcggtcaggaagataa
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integrated database retrieval system
