Oryzias melastigma (Indian medaka): 112149959
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Entry
112149959 CDS
T07439
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112149959
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112149959
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112149959
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112149959
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
SR proteins
112149959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
112149959
NCBI-ProteinID:
XP_024133784
Ensembl:
ENSOMEG00000012826
LinkDB
All DBs
Position
LG22:9157719..9160855
Genome browser
AA seq
292 aa
AA seq
DB search
MSDTEKDFKKEDSRGHSRSASPRGSAKSTSHSPARSKDGSRHSRSRSRSRSRSKSRSRSH
RSSRRRYSRSRSHSRRRRSRSRSRSSDYRRRHRSHSRSPMSNRRRHIGNRGNPDPSICLG
VFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENPEDSKEAKEQANG
MELDGRRIRVDYSITKRAHTPTPGIYMGRPTYGGGGGGGGGGSGGGGGSRRGSRDYDRGY
DRGYDRGYDRGYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgaaaaagattttaagaaggaggattcgagaggtcactcgaggagtgct
tcccctcggggttctgctaaatcaactagccactcaccagcacgctccaaagatggttct
cgtcattcgaggtccaggtctcgatcccggtcaagatcaaaatctaggtctcggtctcat
cgcagttcacgcagacgctactcccgttctcgttcccattcccgtcgtcggcgttccaga
agccgatctcgtagctcagactaccgacggcgccataggagccatagccgttctccgatg
tcaaatcgccgcagacatattggcaacagggggaaccctgaccccagcatctgtcttggt
gtgtttggtctgagcctttacaccactgagagagacctgcgggaagttttctccaagtac
ggcccactgagtgaagtgaacatagtttatgaccaacagtctcgtcgctcgagagggttt
gcctttgtctactttgaaaatcctgaggattccaaagaagcaaaggagcaagctaacgga
atggaactggatgggcgcaggatccgagtggattattccattaccaaacgagcccacacg
ccaacacctggaatctacatgggacgtcccacatatggcggaggcggcggcggtggaggt
ggtggcagtggtggtggcggcggctctcgtcgtggctcaagagattatgacagagggtat
gacaggggctacgacagaggttatgatagagggtatgatcgggactatgatcgatatgat
gatcgggagtaccgatcatacaggcgcagatctccatctccatattacagcaggggatac
cgatccagatctcgatcttactcaccacgtcactactga
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