Oryzias melastigma (Indian medaka): 112149969
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Entry
112149969 CDS
T07439
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112149969 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112149969 (zfp36l1a)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112149969 (zfp36l1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Motif
Other DBs
NCBI-GeneID:
112149969
NCBI-ProteinID:
XP_024133756
Ensembl:
ENSOMEG00000018296
UniProt:
A0A3B3CFG0
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Position
LG22:4749926..4753113
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AA seq
370 aa
AA seq
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MTTAVVSPFFDFEVMNKNNKLMSYNNNLSVPHPMSVPCTGTNVPISSPTGVLLDRKAVGS
PSVGSVYQRRHSVSSTKFNQNQFLNSLKAADHSSLISGVGNASSSNKENRLRDRSFSETG
ERLLNKCLGPASPTCGGGSQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELRSLSR
HPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPQQSSPLNSSNKMERPRLQHSYSF
AGFSSSAGLRDSPTSVTPPPIFFPDEVPDWPSSNPFTYSSQELASLFGPSLSTGAVESNT
PAPPSPTSTSFFIRSMSPQMFESPSSPPDSLSDQEGYQSSSGGSLSGSESPTLDTTRRLP
IFSRLSISDD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccgtggtttctcctttcttcgacttcgaagttatgaacaagaacaacaag
ctgatgagctacaacaacaacctgagcgtcccccaccccatgtctgtcccttgcactggc
accaatgtgcccatctccagtcccaccggggtcctgctggacaggaaggcggtgggatcg
ccctcggtgggaagcgtgtaccagcggcggcactcagtcagcagcacaaaattcaaccag
aaccagtttctgaacagcctgaaggcagcggaccactcctcgctcatctcaggggttggc
aacgccagcagcagcaacaaggagaaccgcctgcgagaccgctctttctccgagacgggg
gagaggctcctcaacaagtgcctgggccccgccagccccacctgcggcggcggcagccag
gtgaactccagccgttacaagacagagctctgcaggcccttcgaggagaacggctcctgc
aagtacggtgacaaatgccagtttgcccacggcatccacgaactccgcagcctgagccgc
catcccaagtacaagacggagctctgccgcacctttcacaccatcgggttctgcccctac
gggcctcgctgccatttcatccacaacgcagaggagcgccgcggacccccgcagcagtcc
tctcccctaaactcttccaacaagatggaaaggcctcgcctgcagcacagctacagcttc
gccggcttctccagctcagccgggctgcgtgacagccccacctccgtcaccccgccgccc
atcttcttccccgacgaggtcccagactggcccagcagcaaccccttcacctattccagc
caggagctggccagcctgtttgggcccagcctcagcaccggtgctgtggagtccaacacc
cctgcgcctccttcccccaccagcacatccttcttcatcagatccatgtcccctcagatg
ttcgagtctccatccagccccccagactccctgtcagaccaggagggctaccagagcagc
tccgggggcagcctgagcggctcggagtcccccactctcgacaccacccgccgccttccc
atcttcagccgcctctccatctccgacgactag
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