Oryzias melastigma (Indian medaka): 112150007
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Entry
112150007 CDS
T07439
Symbol
samsn1a
Name
(RefSeq) SAM domain-containing protein SAMSN-1a
KO
K23707
SAM domain-containing protein SAMSN-1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112150007 (samsn1a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
112150007 (samsn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_2
SAM_1
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112150007
NCBI-ProteinID:
XP_036070863
Ensembl:
ENSOMEG00000006441
LinkDB
All DBs
Position
LG13:30696829..30717054
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AA seq
705 aa
AA seq
DB search
MNLFCFSLEGSMDSLYEAVQSSGDGPPPPIPSRSSSRSCSRSCSPAVLLEDNTKWRGSGR
CVSTDQPHTTNSNKKKRRTHISKSASDNETLDNPVCNTAVWQPAKSQEDLAHVTNKHNEE
VRRTKHRTETKGGKGTNHSGTKKKEKQLLTQSVPTNGVITESKATVKRHHKTGKKTGGRS
GKDVSKKSHNPRVHSPSGTLSPPLGPQFLDVPYPSRPDKRLYLGKSSTLPSQENTTPGRY
ADMVSLPGGATPTHHQRWSNPGDSSPAWSTIQHTCRRPLTEYRAYSHEFSTLQSKEWKGS
QQAAIIQDGSLKRDREPQLPPKVPRSATQVDLSEPNVSVFRFYHRNGDPRIKLKLKMLQR
TASNVSDKKSSKPKRSTSFGRFEGLRHHSSHAKPEDNGTSVLREDCESPDPHKSTGLGKK
MKEISLTMRRKMGKKHAKSFSEETGDDTDKDPEAEHEAGQTGEKNSAKTSISLESLYSGQ
SSSSGVTSESNGSGQRDSLKLEEDGSYHGQFCGRARVHTDFVPSPYDTDSLKLKVGDIIN
IISKPPMGIWTGMLNNKVGNFKFIYVDVLEEKEEEEEAPKIRPQKLCRRPRPTTLLELLE
RLNLEEYASALLLNGYQTVEDLLHLQEKHLIELNVKDAEHRHKLLAAAEYHYTAGDDARD
TEENRSSNSLQEEDSDCPRDSGCFIPSECSETKDDAEQVPDAPSS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttctgcttctcactggagggctccatggacagcctgtatgaggcggtgcag
agctccggcgatggcccacctccacccatccccagccgctcgtccagccgctcctgcagc
cgctcctgcagccccgccgttctgctggaggacaacacaaagtggagaggctccggacgc
tgcgtctccacagaccagcctcacacaaccaactccaacaagaagaagagaagaacacac
atttccaaatctgcatcagataatgaaacactggataaccccgtctgtaatactgcggtg
tggcagccggccaaaagccaagaagatttagctcacgtcaccaacaagcacaatgaagag
gtgcggaggacaaaacacagaacagaaacaaaaggaggaaaaggaaccaatcactcaggg
accaagaagaaagagaagcaacttttgactcagagtgtccctacaaacggagtgataaca
gagtccaaagctaccgttaaaagacaccataagacggggaaaaaaacaggtggaaggagc
gggaaagatgtctcaaagaaaagtcacaacccaagagttcactctccatcgggcacgctg
agcccacctttgggaccccagtttttggatgtgccatacccctccaggcctgacaagcgg
ctgtacctcggcaaatcctccacccttccctcgcaagaaaacacaaccccaggccgctac
gccgacatggtcagtctacctggtggagccacgcccacccatcaccagcgctggagcaac
ccgggcgacagcagccctgcgtggagcaccatccagcacacctgccgccggccgctcaca
gagtaccgcgcctactcccacgagtttagcacattgcagagcaaagagtggaaagggagc
cagcaggcggcaatcatccaggacggcagcttgaagcgggaccgggaaccccagttaccc
cctaaggtgccacgatcagccacccaagtggatctgtcagaaccaaacgtaagtgtgttc
aggttttaccaccgtaatggagaccccagaataaagctaaaactgaaaatgttacagagg
acagcatccaacgtgtcagacaagaaaagcagcaaacctaagcgctctacgagcttcggt
cgcttcgagggcctcaggcatcactcctcacacgcaaaaccagaggacaatggaacatca
gtgctcagagaggactgtgaaagtccagaccctcacaagtcgaccggactcgggaagaag
atgaaggagatttcactgaccatgcgaaggaaaatggggaaaaagcacgccaagtccttc
tcagaggagacaggggatgacacagacaaagacccggaggcggagcacgaagctggtcag
acaggcgagaagaactctgcaaagaccagcatctccttagagagtctttacagcggccag
agctcgtccagtggtgtgaccagtgagtctaacggctctggtcagagggacagcctgaag
ctggaggaggatggctcctaccacgggcagttctgcggcagagctcgcgtccacacagat
tttgttcccagcccctatgacacagactctctcaagctgaaggtgggtgacatcatcaac
atcatcagcaagcctccaatggggatctggacgggcatgctgaacaacaaagtggggaac
ttcaagttcatctatgtggatgtcttggaggagaaggaggaagaggaggaagcgcctaag
atcagacctcagaagctgtgcagaagacctcgacccacaacgctgctggagctgctggag
cgcttaaacctggaggagtacgcatccgccctgctgctgaacggctaccagacggtagaa
gatctgctgcacctgcaggagaagcacctgatcgagctgaacgtcaaagacgccgagcac
agacacaagctgctcgccgctgctgaataccactacacagcaggcgatgatgccagggac
acagaggagaacagatcctccaacagtctacaggaagaagacagcgactgtcccagagac
tcaggctgcttcatcccatccgagtgttcagaaaccaaggacgacgcagagcaagtccca
gatgcaccaagctcctaa
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