Oryzias melastigma (Indian medaka): 112150017
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Entry
112150017 CDS
T07439
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
oml04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112150017
04371 Apelin signaling pathway
112150017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112150017
CD molecules [BR:
oml04090
]
Proteins
112150017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_Teneurin
EGF_2
EGF_CA
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
112150017
NCBI-ProteinID:
XP_024133825
LinkDB
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Position
LG13:15176367..15230168
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AA seq
750 aa
AA seq
DB search
MDRSRAHAGSGRSGRKRSIWKQDMSTEGQQGQLQLRRTMLFLVALTVQPQVVCARGLFEL
QIRHFQNPHGLLQNGECCDLQTSGGQRCSSRDQCDTFFRACLKEYQARVASSGACTFGVG
YSGILGGNSHSLHHLRHSEGGGGEGEDGTNGHIVIPFSYAWPKSFSLVLEALDSDNDTLE
TGQLIERVLLSSMLNPGEQWQPYRHHGQSLSVEYWLRFRCDANYFGPFCNKLCRARDDFF
SHFSCDPSGTKVCMEGWTGPECNKAVCRQGCHQTHGSCTVPGECKCHYGWRGPLCDQCVT
YPGCAHGSCTEPWKCVCDVNWGGLLCDKDLNFCGTHTPCKNGGTCTNTEPNEYQCECPEG
FRGRNCDIVEHACLSSPCMHGATCVEDLEGFSCVCAEGWTGHTCSEAVKHCDRSPCGRGA
TCQDVPEGFRCLCPPGWTGRTCQLDTNECEKGICVHARSCRNLIGGYLCDCLPGWTGHNC
DTRNSSCQGLCLNGGRCEDQVSGSKCLCPPGFSGKFCQNGPSPCDSAPCLNGGLCEDKDG
RTATCSCAVGYSGSFCEIALDLCDPNPCPQGGECQSVEGRYMCACPEGYHGRECVSLRSP
CMGQHCQGAVSDTTNGSLSFYMILLGVLALVTVCGCAACAFIFSHLHRTRKKQQADVPQE
EGINNQRELVNLIRNVDRPAPLLPPAAPPTQPPPPTPCYEEIELTLPPSPALSQPSPALK
PAHAPKLDISNREREKLNRFNHTDNQELEV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggataggtcaagagcgcacgcgggatctgggagaagcgggcgtaaaaggagcatctgg
aagcaagacatgagtaccgaggggcagcaaggacaactccagttgaggcggactatgctc
ttcctcgtcgcactcaccgtgcagccgcaggtggtgtgtgccagggggttgtttgagctt
cagatccgccacttccagaaccctcacggactgctgcagaacggagaatgctgcgatctg
cagaccagcgggggacagcgctgctcttccagggaccaatgtgacaccttcttccgagcg
tgcctcaaggagtatcaagctcgggtcgcctcctctggggcctgcactttcggcgtgggc
tattcaggcatcctgggtggaaactcccactcgctacatcacctgagacacagtgaagga
ggaggaggagaaggagaagatggaactaatggacacattgttattcccttctcttatgcc
tggccaaagtccttctctttggttctggaagctctagattcggacaacgacacattagaa
acgggtcagctgatcgagcgagtcctcctgtcctccatgttgaatcccggtgagcaatgg
cagccataccgacaccacggacagagtctcagcgtggagtactggctgcgattcagatgt
gacgccaattactttggacctttctgcaacaagctgtgccgggctcgtgacgacttcttt
agtcactttagctgtgaccccagtgggacaaaggtctgcatggagggctggacaggacca
gagtgcaataaagcagtgtgtcggcaggggtgccatcagacccacggctcttgtactgtc
cccggagaatgcaagtgtcactatggctggagggggcccctgtgtgaccagtgtgtgacg
taccccggctgtgcacatgggagctgcacagagccttggaagtgtgtgtgtgatgtcaac
tggggaggacttctgtgtgacaaagatctgaacttttgcggcacccacacaccctgtaag
aatggaggcacctgcacaaacacggaaccaaacgagtatcagtgtgagtgcccggagggt
tttcgaggacgcaactgtgacattgtggaacatgcatgcttgtcctctccatgtatgcat
ggggccacctgtgtggaagacctggaaggtttcagctgtgtctgcgctgaaggctggaca
ggacacacctgctcagaagcggtgaagcactgcgatcgcagtccctgcggacgtggagca
acgtgtcaggatgttcctgagggtttccggtgtctgtgtccacctggatggactggcagg
acgtgtcagttggacaccaatgagtgtgaaaaaggtatatgcgtccacgcccggtcatgc
cgaaacctgatcggtggatacctgtgtgactgcctccctggatggacgggacataattgt
gacaccaggaacagcagctgtcagggtttgtgcctgaatggaggacgttgtgaggaccaa
gtgtctgggtcaaaatgcttatgtccacctggtttctctggtaaattttgccaaaacggt
ccaagtccatgtgacagcgccccctgtctgaatggaggattgtgtgaagataaggatgga
cggacagccacctgcagttgtgctgtgggatattctggaagcttctgcgagattgcattg
gatctttgcgatccaaatccctgcccacagggaggggaatgccaaagcgtagagggcagg
tacatgtgtgcttgtcctgagggttaccatggtagagagtgtgtgagtctcagaagtcct
tgcatggggcagcactgtcaaggagctgtgtccgacacaaccaatgggagcctcagcttc
tacatgatcctgctcggagtcttggctctagtgaccgtgtgtggctgtgctgcttgtgcg
ttcatcttttcacacctccaccgcacgcggaaaaaacagcaggcggatgtccctcaagaa
gagggcatcaacaaccagagggagctggtcaacctcatacgaaacgtggaccgtcctgct
cccctgctgcctcctgcagctcctcccactcaacctccacctcccaccccttgctatgaa
gagattgaattgacattgcccccctccccggctctctcacagccctcaccagcactaaag
ccagcccacgctcccaaactggacatttcaaaccgagaaagggagaagttgaaccgtttc
aaccatacagacaatcaggagctggaggtttga
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