Oryzias melastigma (Indian medaka): 112150025
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Entry
112150025 CDS
T07439
Symbol
psma6l
Name
(RefSeq) proteasome 20S subunit alpha 6, like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112150025 (psma6l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112150025 (psma6l)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oml03051
]
112150025 (psma6l)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
112150025 (psma6l)
Peptidases and inhibitors [BR:
oml01002
]
Threonine peptidases
Family T1: proteasome family
112150025 (psma6l)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
112150025 (psma6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
112150025
NCBI-ProteinID:
XP_024133838
Ensembl:
ENSOMEG00000018353
LinkDB
All DBs
Position
LG13:complement(19438233..19443842)
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AA seq
246 aa
AA seq
DB search
MSRGSNAGFDRHITIFSPEGRLYQVEYAFKAISQSGLTSVGIRGSDCTVVVTQKKVPDKL
LDSSTVTNMFKLTPLIGCVMTGHNADSRSQVHRARVEAGEWKYKFGYDITADVLCRRLAD
ISQVYTQNAEMRPLGCCMILVAIDPQLGPVLYKCDPAGYYCGFRATAVGAKQTEANSFLE
KKLKKKPALDLDKTVQLAISCLSTVLAIDFKAHELEIGIVTKDKPKFRTLTDAEIEAHLV
AIAERE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgggtccaacgccggctttgaccgacacatcaccatcttctccccggaaggc
aggctctaccaagtcgagtacgccttcaaagccatctctcagagcggtctgacgtcggtc
ggcattcgggggtcggactgcaccgtcgtggtcacgcagaagaaagtgccggacaagctg
ctggactcctctactgtgaccaacatgtttaagctcacccccctcatcggctgtgtgatg
acgggccacaacgcggacagccgctctcaggtccatcgagcacgggtcgaagctggggaa
tggaagtacaagtttggctacgacatcacggcggatgtgctgtgtcgcaggctggcagac
atctcgcaggtctacacgcagaacgcagagatgagacctttaggctgctgtatgatcctg
gtggcaatcgacccccagcttggccccgtcctgtataaatgtgatccggctggctactac
tgcggcttcagggccacggcggttggtgccaaacagacagaggccaatagcttcttagag
aagaaactgaagaagaagcctgcgttagacctcgataagacagtacagttggccatctcc
tgtctatccactgtgctcgctattgacttcaaggcccatgagctggagatcggcatcgtg
accaaagacaaacctaaattcaggactctgacggatgctgagattgaagctcaccttgtc
gccatagcggagcgggagtag
DBGET
integrated database retrieval system
