KEGG   Oryzias melastigma (Indian medaka): 112150085
Entry
112150085         CDS       T07439                                 
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E
  KO
K06521  semaphorin 4
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:oml04090]
    112150085 (si:ch211-129c21.1)
CD molecules [BR:oml04090]
 Proteins
  112150085 (si:ch211-129c21.1)
SSDB
Motif
Pfam: Sema Ig_SEMA-3_4_7A ig PSI Ig_3 Ig_2 I-set ASA1 Salyut GAPT
Other DBs
NCBI-GeneID: 112150085
NCBI-ProteinID: XP_024133852
Ensembl: ENSOMEG00000002494
UniProt: A0A3B3CYU8
LinkDB
Position
LG4:complement(25804374..25822309)
AA seq 808 aa
MSFLPTLSIVCRLIICVCCGALNDHYGVPRNTILHPNDLKVFREDNIYNYTTMLLRDDLG
VVLLGAREAIFALDINNISTRKSGVYWPVTEEKQRECTYKGKQAEVECRNYIRTLHIIND
TTVYVCGTYAFSPICDYLTFANGQLLLKGKQEEGKGKCPFDPFQRYSSLMVGNDLYSATS
INFLGSEPVILRSSGLVALRSDFKKIWLNEPNFVFMDIVGESVDSPDGDDDKVYLFFSEN
AVEYDFYTKVKVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPLIVQDVFLM
KHNDWRKGVFYGIFTPQSGLSQVSAVCAYSISDIRNIFNGGKFKTRVAVESSQDKYVMYS
GEVPVPRPGACINDVARKMGVNESRQLPDKTLQFVRDRPLMDDAVSPVTGRPLLLKSGPL
LTRIVVDSVTALNQQKYHVMFIGTENGFIQKAVNYAGEMFIIEEIQVVDSPEPIGILRLS
SSKGHLYAGSDSSVIQMPVSNCRRYKNCVDCVLSRDPYCAWDTSSEQCSSVRSLSTSSKN
TVQSLEEGDVSECPAPDPLEAVDFHLVPGNNLQLPCRLHSNLAQAHWQFSDQTLEANNKY
YIYSEGLLILNASESDAGLYSCDSVEQISSRTFSRTMALYNVQLPPAPPAPPVVVISTPG
TTLAKYSDHTHTQTHTLTTKAKEPMPSPLLPENLTANSKVSHLKVSVALLSLLCLCLLGV
IFWFWGRKHLKCLKFVQTLGDREGRKLSAENINGQNRTSETKLLEPESGAVIANNNHSHV
DFRVNEDNHLVNITALEGLGYIHDESEI
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgtcttttctgccgactctcagcatcgtctgtagattgattatttgtgtttgctgtggt
gcattgaatgaccactacggtgtcccaagaaacaccatcctacatcccaatgatctgaag
gtgttcagagaggacaacatctacaactacacaactatgctgctcagagatgacctcggt
gtggtgctgctcggggcaagagaggccatctttgctttggatatcaacaacatttctacc
agaaaatctggggtatactggcctgtgactgaggagaagcagagggagtgtacctacaag
ggtaaacaagctgaggtggaatgccgtaactacattcgaaccctccacatcataaatgac
actacagtttacgtttgtggcacatatgcttttagtccaatctgtgattatttgacattt
gctaatgggcagcttttgctgaaaggaaagcaggaggagggaaaggggaagtgtcctttt
gatccctttcagagatactcctccctcatggtcggaaatgacctgtattctgctacatcc
atcaacttcttgggctctgagcctgtgattcttcgtagctccggcttagtagctcttcgt
agtgactttaaaaaaatctggctcaatgagccaaactttgttttcatggacattgttggc
gagagtgttgacagtcctgatggggatgacgacaaagtgtatttgttctttagtgagaac
gctgtggaatacgacttctacactaaagtcaaagtgtcacgggtggctcgtgtctgtaag
ggagacatgggcggccagcggacgctgcagaggaaatggacgtcgttcctgaaagctcgt
ctggattgttctctccctgaacccagcctgccccttattgtccaggacgtcttcctgatg
aagcacaatgactggagaaaaggtgtcttctatggtatcttcacaccacagtcaggcctg
tcccaggtgtctgcagtgtgtgcgtacagcatttctgatattagaaacattttcaatggg
ggaaagttcaagacccgcgttgctgtggaatcatcccaggacaagtatgtgatgtacagc
ggggaggtgccagtcccgagaccaggagcgtgcatcaatgatgtggcacgtaaaatgggg
gtgaatgaatcgcggcagcttccagacaaaaccctccagtttgtcagggaccggcccctg
atggacgacgccgtcagtccggtgacgggtaggcctcttctgctcaagagcggacctttg
ctgactcggattgtggtggacagcgtgactgcactgaaccaacagaagtatcacgtcatg
ttcatcggcactgagaatggatttatccagaaagctgtcaactacgctggggaaatgttc
atcattgaggagattcaagtggtcgacagccctgagccgatcggcatcctgcgcctctca
tctagcaagggccacctgtatgcaggctcggacagcagtgtcatccagatgccagtcagt
aactgcagacgctacaagaattgtgtggactgcgtcctttccagggatccttactgtgcc
tgggacacctcctctgagcagtgttcctcggtacggagcttgtccacctcctccaagaat
acagtgcagagtctggaggagggagacgtgtcggaatgtcctgcaccagatccattggaa
gccgtggactttcacctagttcctggaaacaacctccagctgccttgcaggcttcactcc
aacctggcacaggcccactggcaattttctgaccaaacacttgaggccaacaacaaatac
tacatctacagcgaaggcctcctcatcctgaacgcgtctgaatcggacgccggcctgtac
agttgtgactccgtagagcagatcagcagcagaaccttcagccggaccatggctctttac
aacgtacagcttccccctgccccacctgcccccccagtggttgtcatttccactccaggg
accacactggcaaaatattcagaccacactcacacacagactcacactctgacaacaaaa
gcaaaggaacctatgccgagcccgttattacctgagaacctaacggccaatagcaaagta
agccacctgaaggtgtctgttgctctgctgtccttgctttgcctctgccttttgggggtg
atattttggttctggggtcgaaaacacttgaagtgtctgaagtttgtgcaaaccctcggt
gacagggaggggcgaaagctgtcggcggagaatataaacggccagaacagaacttctgag
acaaaactcctggagcctgagtcaggagccgtcattgccaacaataatcactctcatgtg
gacttcagagtgaatgaggacaaccacttggtcaatattacagccttggaaggtttggga
tatatacacgacgagtcggagatttga

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