Oryzias melastigma (Indian medaka): 112150250
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Entry
112150250 CDS
T07439
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112150250
04020 Calcium signaling pathway
112150250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112150250
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112150250
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
112150250
NCBI-ProteinID:
XP_036067345
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All DBs
Position
LG4:complement(6443771..6559626)
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AA seq
2490 aa
AA seq
DB search
MKAWKEHMHYAEIPGSLPTMLEPGSCSVSSQSLTDDHNDSGLLGAPGGGPKCPAISLDPS
MEPMCGSSTPRHHVLPPSPVDGESWQKHRSRLAGGSSPYSEAPSLLEPLGLSTSYDTLYL
PPMPGNAAPTHPNRLGLSLDVTSPFDTGAGMLGVDGDLAVSPNVMKRRRGGLIEQRDIVK
AHQAHKIHSTPQARRKEWEMARFGDEVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQ
TKAQRARTMALYNPIPVRENCFTVNRSLFIFGEDNVVRKYAKKITEWPPFEYMILTTIIA
NCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWN
VMDFIVVLSGILAAAGAHLNISVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPL
LQIGLLLFFAILMFAIIGLEFYSGKLHKTCTPMSGILENETVDSSEYEFPCGVRQCPTSY
ICNRSWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNWLYFIPLII
IGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLA
EENKNAGPSALDVLKRATTIKRRGMDVRQGHPGEEHYGDISSVGMPPARISIRSGKRGPA
AYFRRKERLLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPFWLSNFLYYAEFLF
LALFLTEMFLKMYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALR
LLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYT
PTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKYGMWSSVYFIVLTLFGNYTLLN
VFLAIAVDNLANAQELTKDEEEAEAAFNQKHAMQKAKEVGPLSSFMSSEGSRRRRPYLYR
KRAIHRSRPTYSYSLEEDHGSVREGRPPLNSTNSFMSRRERRKRMTMSVWEQRTSQLRRH
RQMSSREILFNSPGEEKDAQHPLSLHRKAVQNTPSGGGKCSTDPQGSTGDIPEPPMSVLE
PEPLDPPTTSRPPESDLTTDSKTLGVNHKAVHERRSPRLNGERQHRAVKKFRPPDNADGH
ADIRGRRTPHHCDHEQGTNEQPMSCPPGGRRRNHDSEEISAECENKEGEEPKEEEHSRQF
DQNEGEDSMHQDIQNHSSDPGSLKRQEEPPLQPNASPPANPGDNGEEKEVDPGQDNHPLS
SSVFIEVPNMQSSLELSTITVNSKDPERCKSEKEEEEDEVKPVSTERPDSMFIFKPDNPV
RRACHYVVNLRYFEMSILLVIAASSIALAAEDPVATTSDWNKVLRYFDYVFTGVFTFEMI
IKMIDQGLILHDGSYFRDLWNILDFIVVIGALVAFALTNVMGNNKGRDIKTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSS
KDTEKACQGYYIDYGKDKKEMKKREWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSV
DVTEEDRGPSHGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKN
ERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSA
PPAYDAVLKHLNTAFTVLFSIECVLKILAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQ
RIDTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG
MQVFGNIKLNEETQINQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQQCETDSSLQ
TAEVTSDQREGCGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLD
EFVRIWGEYDRAASGRIHYKEMYKVVRTISPPLGFGKNCPHRVACKRLVLMNMPVDDDMS
VHFTSTLMALIRTALEIKIARGGEDRNQMDLDLQKEIGVIWPHLSQKALDLLVPIHKASD
MTIGKIYAAMMIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNVKSLSFLG
HSAGSALTRGGFVALSPVSPQEMFVQQLPSSRQEKEEDEDEDYHSPYHPYRHRLHYHQHM
HTLVPEVVEYNQLMQQTRQDPTLSKSPQRTPSVRASSMPRLAIDPQPGLSADTKSMKRSF
STIGDQCVNGLWQEQHSLERISPDAAYRPRQRSFRGQRVSPKEASSHERGRSKERRHLLS
PDVSREPSHERSRSPSEGRAHNSQKPVNPSVSPVNSASDSGTPRNRRQLPQTPSRPRPHI
SYSPLVCRASTSPTAPAPTEEQTHPPDGPSDSTETPWRTDKENRPLSAGQSSPAGKGSAP
AHSSPHRYISEPYLHFHEESSGRDRGDGQETLTFETAIATSLGRTHAISSAPQLRHSWQV
PNGHFRKHLGQANPADGSELLSDTDEDDRC
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatggaaagaacatatgcactatgctgagatcccgggcagccttcccaccatg
ctggaaccgggctcctgttcggtcagctctcagtctctgacagatgaccacaatgattcg
gggctactcggagccccaggaggagggcccaagtgtccagcaattagtctggatccgagc
atggagccgatgtgtggaagcagcacaccccggcaccatgtcctccctccgtccccggtg
gacggcgaaagctggcagaagcaccgctcaagactggctggaggttcaagcccgtattca
gaggctccttcgctgctggagccactcggtctgtccaccagctacgacactctctacctc
ccccccatgcccggcaacgctgcccctacacacccaaaccgtctggggctctctctggac
gtgacctccccgtttgacactggagccgggatgctgggggtggacggagacctggcagtc
agtccgaacgtgatgaagagacggcgggggggcctgattgagcagagggacatcgtgaaa
gctcatcaagctcacaagattcatagcacaccgcaagccagacgcaaggagtgggaaatg
gcccgttttggagacgaggtccccggcttgttgagttctggagacgggggttcagagcgc
aatcggaaccgggatggagcggctgtgtctacaggtgggatctccccagccttcaagcag
accaaagcgcagcgcgcgcgcaccatggccttgtacaaccccattccagtcagggagaac
tgcttcaccgtcaacagatcgctcttcatcttcggcgaggacaacgtggtgaggaagtac
gccaagaaaatcactgagtggcctccatttgagtacatgatcctcaccaccatcatcgcc
aactgcatcgtcttggcgctggagcagcaccttcctggagaggacaagactcccatgtcc
aagaggctggagaaaacggagccttacttcattgggatgttctgtttcgaagctgggatc
aagatcatcgctctgggcttcgtgttccataaaggatcctacctcaggaacggctggaac
gtcatggacttcatcgtagtcctcagtgggatcctggcagcagcaggggcgcacttgaac
atttctgtggacctgaggactctgagggccgtgagggttctgaggcccctcaaactggtc
tcagggatccccagtctgcagatcgtcctgaagtcaataatgaaggccatggtccctctg
ctgcagattgggctcctgctgttctttgcaatcctcatgtttgccatcatcggtctggag
ttttacagcgggaaactacacaagacctgcacacccatgtcaggaatactggaaaatgag
actgttgactcgtctgagtatgagttcccgtgcggcgtgcgccagtgtcccaccagctac
atctgcaaccgatcctggatcggccccaacgacggcatcacccagtttgacaacatcctg
ttcgctgttctcaccgtcttccagtgcatcaccatggagggctggaccactgtactctac
aataccaacgatgctttggggccgacctggaactggctctacttcatccctctgatcata
atcggctccttctttgtcctgaacctggtgctgggagtcctgtcaggggaatttgccaaa
gaaagagagagagtggaaaaccgcagagctttcatgaagctgaggcgtcagcagcaaatc
gagagagaactcaacggctatcgtgcctggatcgacaaagcagaggaagtgatgcttgca
gaggagaataagaacgcgggtccttcagccctcgatgtgttgaagcgagccaccaccatc
aaaaggaggggcatggatgtgcgtcaggggcatccaggggaggaacactacggtgacatt
tcatctgtgggcatgcccccagccagaataagcatcaggagtgggaaacgaggtccggct
gcttattttcggcgtaaagaacgcctcctgcgcatttccatccggcgcgttgtaaagacg
cacactttctactggacagtcctgggcctggtggctctcaacactctgtgtgtagctatt
gttcaccacaaccagcctttctggctctccaacttcctctactatgcagagtttctgttc
ctcgctctgttcctgactgagatgttcctaaagatgtacagtttggggccgcggctttat
ttccattcctcctttaactgctttgactgcagcgtgattgttggcagcatctttgaagtg
ctctggggtttcttcaggcctggaacctcctttggcatcagcgttttgcgtgctctccgt
ctgctgaggatcttcaaaatcacaaagtactgggcttcactgagaaacttggtcgtctcg
ctgatgaactccatgaagtccatcatctccctgatcttcctgctcttcctcttcattgtt
gtctttgcgcttctcggcatgcagctttttggcggcaggttcatctttgaagactacact
ccgacaaactttgacacctttcccgctgctatcatgaccgtctttcagatcctgaccgga
gaggactggaacgaggtgatgtataacggcattcgctctcagggaggagtgaagtacggc
atgtggtcctctgtgtacttcatcgttctgactctttttggaaactacactctcctgaat
gtcttcttggccattgctgtggacaaccttgccaatgcacaagaacttaccaaggatgaa
gaagaagcagaggctgcgtttaatcagaagcatgccatgcagaaggccaaagaggtcgga
cctttgtcgtctttcatgtcttcagagggaagccggaggaggcggccctacctgtacagg
aaaagagccatccaccgcagccggcccacctactcctactccctggaggaggaccatggc
agtgtcagggagggccgcccgccactcaactcgactaactcctttatgtccaggagggag
aggagaaagaggatgaccatgtcggtgtgggagcagaggaccagccagctgaggagacac
cggcagatgtccagccgggagattctgtttaacagtcccggtgaggagaaggacgctcag
cacccgctgtccctgcaccgcaaggctgtgcagaatacaccatcagggggcgggaagtgc
tcgactgacccccaggggtccacaggtgacatccctgagccacccatgtccgtgctggaa
ccagaaccactggatcctcccaccacctcaagaccccccgagtctgacctcaccacggac
agcaaaacgttaggagtgaaccacaaagctgtccacgagcgccgaagcccccgactgaac
ggggagcggcagcaccgggccgtgaaaaagttccgacctccagataacgccgacggtcac
gctgacatccgcggcaggaggacgcctcatcactgtgaccatgagcaaggcaccaacgag
cagccaatgagctgtccccctggggggcgaagaaggaatcacgattcagaggagatatca
gctgagtgtgaaaacaaggagggggaggagccaaaggaggaggaacacagcagacagttt
gatcagaatgaaggagaggactctatgcaccaggacatccaaaaccatagcagcgacccc
ggttctctgaagcggcaggaggagcctccactgcagccgaacgcgtccccccctgcaaac
cccggggacaacggggaggagaaggaggtggatccgggtcaggacaaccatcctctgagc
tccagtgtttttatcgaggtgcccaacatgcagtcttctctggagctttccacgatcaca
gtcaacagcaaagatccggaaaggtgtaaatcagagaaggaggaagaggaggacgaggtg
aagcctgtcagcactgagaggccagacagcatgttcatcttcaaacccgacaaccccgtg
cggcgagcgtgtcactatgtggtgaatctgcggtactttgaaatgtccatcctgctggtc
atcgcggccagcagcatcgccctcgctgcagaggatcctgtcgccaccacgtctgactgg
aataaggtcctgcgttattttgattatgtgtttaccggagtcttcacgtttgaaatgatt
ataaagatgatcgaccagggtctgatccttcacgacggctcgtacttcagggacctgtgg
aacatcctggatttcatcgtcgtgatcggagcgctggtggcgtttgctctcaccaatgtg
atgggaaacaacaaaggacgagacattaaaaccatcaagtctttgagggtcctgcgcgtc
ctcagaccactgaagaccatcaagaggcttccgaagctcaaggcggtgtttgactgcgtg
gtgacgtccctgaagaacgtctttaacatcttaattgtctacaaactcttcatgttcatc
tttgctgtcattgcggttcagcttttcaagggaaagttcttctattgcactgacagctca
aaggacacggagaaagcctgccagggctattacatcgactatgggaaagacaagaaggag
atgaagaaacgagagtggaaaagacacgagtttcattacgataatgtcatctgggctctg
ctgacgctcttcaccgtttccacaggagagggttggcctcaagtcctgcagcactctgtg
gacgtgacagaagaagaccgaggtccaagccacggaaacaggatggagatgtccatcttc
tacgtcatctactttgttgtcttccctttcttctttgtcaatatctttgtggctctcatc
atcatcaccttccaggaacagggggataaaatgatggaggagtgcagccttgagaagaat
gagagagcgtgcattgactttgcgatcagcgccaagcccctgacccgatacatgccgcag
aaccggcacacattccagtaccgactgtggcattttgtggtgtccccctcctttgagtac
actgtcctggccatgatcgctctcaacaccatcgtcctgatgatgaagtattactctgca
ccaccagcgtatgacgccgtgctgaagcacctgaacaccgctttcaccgtgctcttctcc
atcgagtgcgtcctcaagattctggcctttggctttctgaactacttccgagacacctgg
aacatttttgacttcatcaccgtcttgggcagcatcactgagatcgtggtggatctgcag
cgcatcgatacgttcaacatgagtttcttaaagctgttccgagccgctcgcttgatcaaa
ctgctgcggcaaggttacaccatccggatcctgctgtggaccttcgttcagtccttcaag
gccttgccttacgtctgtctgctcatcgcaatgctcttcttcatctatgccatcatcggg
atgcaggtgtttggaaacatcaaactgaatgaagagactcagatcaaccaacacaacaac
ttcaaaaccttctctggtgctctgatgctgctgttcaggagtgccacaggagaatcgtgg
caggagatcatgctgtcatgtttggggggacagcagtgtgaaaccgactcctctctgcag
acggcagaagtgacgagcgaccagcgggagggttgtggctccgactttgcctatttctac
tttgtgtccttcatctttttcagttctttcctgatgctgaacttgtttgtggctgtgatt
atggataactttgagtatcttacaagagactcgtccatcctcggtccgcaccatctggac
gagttcgtccggatctggggggagtacgatcgagctgcaagtggaaggatccactataag
gagatgtacaaagttgttcgcactatctcacctcctctgggctttggaaagaactgcccc
cacagggtggcatgcaagagactggtactgatgaacatgcctgtggatgacgacatgagc
gtccacttcacatccaccctcatggcgctgatccgcaccgccctcgagatcaagatagcg
agaggaggagaagatagaaaccagatggatctggatctgcagaaggagattggagttatt
tggcctcacctgtcccagaaggcgttggacctgctggtcccaattcacaaagcgagtgac
atgactatagggaagatctatgcggccatgatgattatggattactacaagcaaaacaaa
gccaagaagttgagacagcaactagaagaacagaaacacgctcccatgttccagcgaatg
gacgcgtcgtctcttccccaagaaatcctatgcaatgtcaagtccctgtcgttcctcggt
cacagcgctggatctgctctcaccagaggagggttcgtggctctcagcccagtttccccc
caggaaatgtttgtgcagcagttgccctcctccaggcaagagaaggaggaagacgaggat
gaggactaccattcaccctaccacccctaccgccaccgtctccactaccatcaacatatg
cacacgctggttccagaggtagtggagtacaaccaactgatgcagcagacccgccaagac
ccaacactcagtaaatcacctcagcgcactccatcagttagagcatcttccatgccgaga
ctggctattgacccgcagcccggcttatctgcagacacaaagtcgatgaaacgttccttc
tccaccattggagatcagtgtgtgaacggcctctggcaggagcagcactctctggaaaga
ataagtccagacgccgcctacagaccccggcagaggagctttagaggtcaacgagtcagt
cccaaggaagctagcagtcatgagagggggagatcgaaggaacggcgccacctgctgtct
cctgacgtgtcccgggagccttcacatgagaggagccgctcgcccagcgaaggacgcgca
cacaactctcagaaaccggtgaacccatcggtgagtcctgtcaactcggcctcagactct
ggtacccctcgtaaccggcgccagctccctcagacgccgtcccggccgaggcctcacatc
tcctactctcctctcgtctgccgagcctccacctcccccaccgctccagcccccacagag
gagcagacccaccctcccgatgggcctagcgactccacagagactccctggaggactgac
aaggagaaccggcccctgtctgcaggtcagagctcccccgcaggcaaaggttcggcacct
gcccactcttctcctcaccgctacatctcagagccctacctccatttccacgaggagtcg
agcggcagggaccgaggggatggacaggagaccctcacctttgagaccgccatcgccacc
agcctgggacggacacacgccataagctccgcccctcagctcagacattcgtggcaggtt
cccaatggccatttccgcaagcacttgggccaggcgaacccagccgacggcagcgagctg
ctgagtgacacagacgaagacgaccgctgctga
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integrated database retrieval system
