Oryzias melastigma (Indian medaka): 112150302
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Entry
112150302 CDS
T07439
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112150302 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112150302 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112150302 (cyfip1)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112150302 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
112150302 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
112150302
NCBI-ProteinID:
XP_024134265
Ensembl:
ENSOMEG00000004203
UniProt:
A0A3B3BDH3
LinkDB
All DBs
Position
LG9:15637134..15674369
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVVYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNDMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMCFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGRFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVIHGYEELLAD
IVNLCADYYENKLYLTPGEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSVSSSPQYNICEQMIQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDTEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DRFSNKEFPESAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQITLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILDTKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRTDCKNQGTNIPWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRVSSALYKSM
ELAINRFESEDLSSIMELEGLLEVNRMTHKLLSKFLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTELTFSQEIQREKPSNAQPQYLHGSKTLNMAYSS
IFSSYRNFLGPSHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLCEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLEAKMKRLETKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPTNGVMHVDECVEFHRLWSAMQFVYCI
PVGANEFTVERCFGDGLHWAGCMIIALLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQVLNNEIFGILNKYMKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgtgactttagaagacgctctctccaacgtggacctcctggaggagctg
cctctcccagaccagcagccgtgcatcgagcccctcccctcctctgtggtctatcagccc
aacttcaacaccaacttcgaggacagaaatgcgttcgtcaccggcatcgccagatacatc
gagcaggctaccgtccactccagcatgaacgacatgctggaggaggggcaggagtacgcc
gtcatgctctacacctggaggagctgctcccgtgccatcccacaggtgaagtgcaatgag
cagccaaacagagtggagatctatgagaagacggtggaggtcctggagccagaggtcacc
aagctgatgaacttcatgtgcttccagcgcacagcaatcgatcgtttctgtggggaggtc
cgtcgcctgtgccacgccgagcgcaggaaggactttgtttctgaggcctacctgctgact
ctgggacgattcatcaacatgttcgctgtgctggacgagctgaagaacatgaagtgcagc
gtcaagaacgaccactctgcatataaaagagctgctcagttcctcagaaagatgtctgag
ccatcatccattcaggagtcacagaacctgtccatgttcctggcgaaccacaacaaaatc
actcagtcgttgcagcagcagctggaagtgattcacgggtacgaagagctgctggcggac
atcgtgaacctctgtgccgattactatgagaacaagctttatctgacgcccggcgagaag
cacatgctgctcaaagttatgggctttggcctgtacctcatggatggaaacagcagcaac
atctacaagctggatgccaagaagagaattaacctcacaaagattgataagttttttaag
caactccaggtggtcccgctgtttggcgacatgcagatcgagttgtcccgatacatcaag
accagtgctcactttgaggagaacaaatccaggtggacctgcacctccgtatccagcagc
cctcagtacaacatctgtgagcagatgattcaaatcagggacgaccacatgcgcttcatc
tctgagcttgcacgctacagcaacagtgaggtggtgaccggatcagggcggcaggaggcc
caaaagacggatacggagtacaggaagctgtttgacctggccctgcagggcatgcagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaagctggtccatccaact
gacagattctccaacaaggagttccctgaaagcgcagaggagtatgagagagccacccgc
tacaactacacgagcgaggagaagttcgccctggtggaggtgatggccatgatcaaaggc
ctgcaggtgctgatgggacgcatggagagcgtgttcaaccacgccatccgtcacaccatc
tattccgcgctgcaggactttgctcaaatcaccctgcgggatccactgaggcaggccatc
aagaagaagaagaacgtcatccagagcgtcctccaggccatccgcaagacagtctgcgac
tgggaaacgggccgcgagcctcacaacgacccggctttgcggggagaaaaggacccaaag
ggaggctttgacatcaaggttcctcgccgagctgtggggccctccagcactcagctgtac
atggtgaggaccatgctggagtctctcatcgcagacaagagcggctccaagaagactctg
cgcagcagcctggaaggccccaccatcctggacatcgagaagttccaccgcgagtctttc
ttttacactcacctcctaaacttcagcgagaccttgcagcagtgctgtgacctctcccag
ctttggttcagagagttcttcctggaactcaccatgggccgcaggattcagttccccatt
gagatgtccatgccgtggatcctcaccgaccacatcctggataccaaggaggcttccatg
atggagtatgtgctgtatcctctggatctgtacaatgacagtgctcactacgccctgacc
aaattcaagaagcagttcctgtatgatgagatcgaggctgaggtcaacctgtgcttcgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagatcctggcaggaagt
ctcctgctggacaaacgactgaggactgactgtaagaaccagggcaccaacattccctgg
cccagctccaaccgctacgagactctgctgaagcagcgccacgtccagctcctgggacgc
tccatcgatctgaaccgcctcatcactcagagggtttcctctgcgctctacaaatccatg
gagctggccatcaatcgcttcgagagcgaggacctctcctccataatggaactggaaggt
cttctggaggtcaaccgcatgacacacaagctcctcagcaagttcctgactctggacagc
ttcgacgccatgttccgcgaggccaaccacaacgtgtcggccccttacggcaggataacg
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggttcc
accaacaggtttgtgcgcaccgagctgacgttctcgcaggaaatccagcgggagaagcct
tctaatgcccagcctcagtatctgcacgggtcaaagacactaaacatggcgtacagcagc
atcttcagctcctacagaaacttcctgggaccttcgcacattaaggtcatgtgcagactg
ctgggctaccagggcatcgctgtggtgatggaggaactgctgaaggtggttaaaagcctg
cttcaaggcaccatccttcagtatgtgaagaccttgatggaagtgatgcccaagatctgc
aggcttccacggcatgagtacggctcccccggtatcctggagttctttcaccaccagctg
aaggacatcgttgagtatgccgagctgaagacggtgtgcttccagaacctgagggaggtg
ggaaacgccctcctgttctgcctgctgtgtgagcagagcctgtctcaggaagaagtctgt
gatttgctgcatgctgcacctttccagaacattcttccacgagtccacgtcaaagaaggg
gaacggctggaggctaagatgaaacgcctggaaaccaaatacacggctctgcacatggtt
ccacttatagagcggcttgggactccacagcaaatagccatcgctcgtgagggcgacctg
ctcaccaaggagaggctttgctgcggcttgtccatgttcgaagtcatcctgactcgtgta
cgaggcttcctggacgaccccatctggcgtgggcctttgcccaccaatggtgtgatgcac
gtagacgagtgtgtggagttccaccgtctctggagcgccatgcagtttgtgtactgcatc
cctgtgggagccaacgagttcaccgtggaacggtgcttcggtgacggcctccactgggcc
ggctgcatgatcattgccctgctgggccagcagaggcgctttgacatcctcgacttcagc
taccaccttctcaaggtgcagaagcacgacggcaaagacgagatcatcaagagtgtgcct
ctaaagaaaatggttgaccgaatccgcaagttccaagtcctcaacaacgagatctttggg
atcctgaacaagtacatgaagtctggagacggagagaacatgccggtggaacacgtccga
tgcttccagccgcccatacaccagtcgctggccagcagctga
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