Oryzias melastigma (Indian medaka): 112150371
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Entry
112150371 CDS
T07439
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112150371 (sin3b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112150371 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
112150371
NCBI-ProteinID:
XP_024134387
Ensembl:
ENSOMEG00000011598
UniProt:
A0A3B3BY52
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Position
LG4:complement(6839820..6862692)
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AA seq
1263 aa
AA seq
DB search
MAKIQAHSAAKQISQIQEKPFVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSP
FSAQVSPGQYSKNLTPPAVGTSSGTAFTVHTEAGPVQASEVKVPLSDSLSSSSTGPAEPP
SRLSLPLTSKESHNQATISSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLEI
LHTYQKEQLEAKESRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGSSL
TGGKEQLKKSEEDDAATKQNKKRPRPILLQHMSPLLKKKMKYSCTKDQSFAAAGKHGVLR
EFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFL
GDKELSHAVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVL
NDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLA
RLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKA
KEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQ
EQSTEEGGVGQQSRNGSASTSEPHMVFTYEDKQILEDAAALIIYHVKRQPTIHKDDKDHI
KRIIQHFVPDLFFSRRGELSDTEEWTDEEGEHEEAGERGGAAPEAGGGHSTNASGPAAVT
VGGQTQPAHAQPNNTQAQLHQQPNGESRRRRCSPSQTTDTEASTTSSSTSQPPGTSSSTP
GPAPLDAPSGVPAEKMDLRDPEAEHQKEMDGVYNLFLVNNNWYFFLRLHQTLCSRLLRVY
RQAERQLLEHRAEQSRERLLVAEGRREKACDLAMELRLKQPSEVELEEYYPAFLDMVRSL
LDGNLDSTQYEDTLREMFTIHAYIGFTLDKVIHNIIRQLQHLVSDEVCLQVVDLYLTERK
RGAAGGNLSSQCVRAAWETSYQWKAERVMAEENCFKLMFIQNKGQVTMTVELLDTEEAQT
DDPLDVQCLSSYMEQFVGTESSLCSQAEGYFFKPVFLPRNLRRFRRWQVRQVEAMRCRRE
WHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARKSQHRVAASQHERFHK
WHKDWLSNHVTTAAERAVHNWLMGEEEEDFIPCKTSCLPTELKGQMVNRYRVHYSSSKAP
PSP
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggcgcatagcgccgccaagcaaatcagccaaattcaagaaaagccg
ttcgttatcacacaaaagcaagtgcagcagcaacacttccagaagctgaaggttgaagac
gccttgtcttatttggaccaagtgaagatacggtttgcaaatgatcccggcatttataac
aagttcctggacatcatgaaggagttcaagtcacagagcatcgacacaccgggggtcata
aaccgagtgtcgcaactatttcacggacatccagacctggtcttgggcttcaacgccttc
ctaccaccaggttatcggatagagatccccaaaaatgggatggcctttctccagtccccg
ttctctgcacaggtatctccgggtcagtacagtaaaaatctgacccctcctgcagtgggc
acgtcctcaggcactgccttcactgtccacactgaggctggacctgtccaggccagtgaa
gtcaaggtgcctttatcagattccctttcatcgagctcgacaggacccgcagagcctccc
agcagactttctcttcccttgactagcaaagagagccataatcaggccaccatctcctct
gtgtccccacctgcttcagagaccagtcctgtagagtttgacagtgccatcagctatgta
aacaagattaaaaaccgttttctggaccaccctgagatttatagagccttcctagaaatt
cttcacacatatcagaaggagcagctggaagcgaaggagagtcgaggcagcagcggcatg
actgaagacgaggtgttttccaaagtcgccagcctttttaaggggcaggaggatctactc
gccgagtttggacaattcttacccgatgctaagagatcgctgttcaccgggagttcgctg
acgggtggcaaagagcagctgaaaaagtctgaggaagacgatgcagcaaccaaacagaac
aaaaagaggcccaggcccatactgctgcagcacatgtctcctctgcttaagaaaaaaatg
aaatattcttgcaccaaagatcagtcttttgctgcagccgggaagcacggcgtgttgagg
gaattctccttctttgacaaggttcgccgcctcttcaaaagccaggaagtgtacgagaac
tttctgcgctgcatcgcgttgttcaaccaggaagtggtttcaggggcggagcttctccaa
ctggtgacacctttcctggggaagtttccggagctgtacacgcagttcaagtcctttctg
ggggacaaagagctctctcatgctgtatcggggctgtcggatcgttacatggagggggga
ggaggcagggaggtggattatgcctcctgcaagcgcctggggtccagctatagagcgctg
cccaagacctaccagcaacccaaatgcagcgggcgcacagccttatgcaaagaggttttg
aatgacacctgggtgtcgtttccttcctggtcggaagattctacttttgttagctcaaag
aagactccttatgaagagcagctgcatcgctgcgaggatgaaagatttgagttggatgtc
gttctggagacaaacctggcaaccatcagagtgctggagagcgtccagaagaagctggct
cgcctctcgcccgaagaccaggacagattccgattggacgactgcctgggtggcacatcc
gaggttatccagcggcgtgccgtctaccgtatctatggcgacaaagcccccgagatcatc
gagggacttaagaggagtcccgccaccgccgtgcctgtggtgctgaagaggttgaaagct
aaggaagaagagtggagagaagctcagcagggtttcaacaaaatctggagggagcagtac
gagaaggcgtacctgaagtccctcgaccaccagggagtgaacttcaaacagaacgacatg
aaggcgctgcggtccaagagcctcctcaacgagatcgaaagcatctacgacgagcgtcag
gagcagagcacagaagagggcggggtcggtcagcagagccgcaacggctcggcctcaaca
agcgagccgcacatggtgttcacctacgaagacaagcagatcctggaggacgccgccgct
ctcatcatctaccacgtcaaaagacagcccaccatccacaaagacgacaaagaccacatc
aagcgcatcatccagcacttcgtccccgacctgttcttctccagacgcggcgagctgagc
gacacggaagagtggacggacgaggagggagagcacgaggaggctggagagagaggagga
gctgcacctgaggcgggaggtggtcattctacgaacgcgtcaggacctgcagcagtgacc
gtcgggggtcagacccaacccgcccacgcacagcccaacaacacccaggcgcaactgcac
cagcaacccaacggcgagtccaggaggcggcgctgcagcccctcccagaccacagacacg
gaggcctccaccacgtcgagcagcacaagccaacctccggggacctcctcgtcgacgcca
ggccccgcacctttagacgctccctccggcgtgcccgcagaaaaaatggacctccgcgac
cccgaggcggaacaccagaaggagatggacggcgtctacaacctgttcctcgtcaacaac
aactggtatttctttttgcggctgcaccagacgttgtgttcgcggctgctgcgcgtctat
cgccaagccgagcggcagctgctggagcaccgggccgagcagagccgagagaggctgctg
gtggccgaggggaggagggaaaaggcctgtgacctcgccatggagctccgcctcaaacag
cccagcgaggtggagctggaggagtactacccagccttcttggacatggtacgcagcctg
ctggacggaaacctggactccacgcagtatgaagacacgctgagggagatgttcaccatc
cacgcctacatcggcttcactttagacaaggtcatacacaacatcatccgacagctgcag
cacctggtgagcgacgaggtgtgtctccaggtggtggatctttacctgactgagaggaag
cggggggcagcgggggggaacctgtcctctcagtgtgtcagagccgcctgggagaccagc
taccagtggaaggctgagagagtgatggcggaagagaactgctttaagttgatgtttatt
caaaacaaaggtcaggtaacaatgactgttgagctgctggacaccgaggaggctcagacc
gacgacccgttagatgttcagtgcctgtcgagctacatggagcagtttgtgggaacagag
tccagtctgtgctcgcaagcagagggatacttttttaaacccgtttttcttccaaggaac
cttcggcgtttccgccgctggcaggtgcggcaggtggaggcgatgcgctgcagaagagag
tggcaccgccagctgggtgtggagagcgcgggcagtttggactgtcggttcaagctcaac
actcataagatggtgtttgtcatgaactccgaggactacatgtaccgcagaggagctctg
gtcaaggccagaaagtcgcagcacagggtagcggcgagccagcacgaacgctttcacaag
tggcacaaagactggctgagcaatcacgtcacgaccgccgccgagcgcgccgtgcacaac
tggttgatgggcgaggaagaggaggacttcatcccctgcaagacgagctgcctgcccacc
gagctgaagggacagatggtcaacagataccgagttcattacagcagtagcaaagccccg
ccctctccgtaa
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integrated database retrieval system
