Oryzias melastigma (Indian medaka): 112150378
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Entry
112150378 CDS
T07439
Symbol
fcho1
Name
(RefSeq) F-BAR domain only protein 1
KO
K20042
F-BAR domain only protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112150378 (fcho1)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112150378 (fcho1)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112150378 (fcho1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
GMIP-like_FCH
FCH
Adap_comp_sub
DUF3502
Motif
Other DBs
NCBI-GeneID:
112150378
NCBI-ProteinID:
XP_024134402
Ensembl:
ENSOMEG00000005835
LinkDB
All DBs
Position
LG4:complement(14680262..14729085)
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AA seq
1219 aa
AA seq
DB search
MAFQDNFWGEKNAGFDVLYHNMKHGQLATKELAEFIRERAAIEETYSKSMSKLAKMASNG
SPQGTFAPMWDVFRVSSDKVALCHLELMKKMNDLIRDINKYGEEQVKIHRKTKEKMVGTV
EAVQALQVQSTHLQKSKEGYHAKCLELDRLKKEGAPQKELEKAELKSKKAAESFALCIEK
YNRVGGEFEQKMSESAQNFQEIEEVHLRQMKQLMKSYSHSIEDTHVQVGQVHEEFKQNVE
NIGIDTLIQKLAEQKGTGKDRPAPVGFEECMTALAPEGGKKSRAKAFRIPGLGKRDKEPD
STDSAVMDEMSSPLEVDDEGFVIRADSNQNGCSEGKNNTFYSSDSDFDDEEPKKFHIQIR
PVTSGNRSSSVATEKELKATVGALTLPPNRGARQQVANKRNLSRNSSSAGGRSEETEAPS
HRDGEQSGLCRSTSSPNHSRLSSTASGSDSLFGPPLETAFKSKSFDSQEQLREQNTFGAS
EYAAFSSDSSSPENVEDSGLDSPSHQPLGPSPEPAGWAAWPPASQSKDQTQTLGRPVDPF
LSAFHEPNPGRSTNSQDDHVWSAPSSRPSRGPPDAEPPSRFTAFSHFPQPEMEPSVWNCK
HIPTEDPFLAVFERTVTQETLNFSDPWTRPPPRQLSQDGRGKEVRGDPFSVSLADTKTLP
THSSSSSSSSSNRKDRDRKRDRSLPPPVTSDDPFAITMIGSPTHQSSLAAAAGVMPPHGN
SSGPPTSSSRPGADSNSLPAAQPKKEPPHWNSVHNPFNEVSSSRSQEGGGKGEARKGGER
RKHRSSESEPRRNAPPLTRHSGPQEDLCFSTDKDQDCLNLNQITCTVSSQRGSKHNFRQD
TAEVAAAAPQRASHAKRSAGRLSGCERSRSLCSSPLPEPAPSFTSSSSSSPSEWGTQVRD
SDWGWQNRVPSPARMGQASPLSYQHQDLQQRTMHLSRGPSPISLSAQEAWPVAAAITEYI
NAYFKGGQHNRCLVKITGDLTMSFPAGITRIFSANPNIPILSFRLVNISRIDHFLPNQKL
LYSDPSQSDPDTRDFWFNMQALQLHLQREAELNPKASYYNVGLLKYQVSSQDPGRAPLLL
SAECQRSGTVTRVSLDYHCCPATAPSTQLTSVQVLLPLDHTATDVQYQPPASWNAEERRL
LWKLPNLSPTNHSKGSGTLCASWQCLEVPRGPPPSLAVQFVGSGTSLSGMGVELVGSRYR
MSLVKKRFATGKYMAGCSL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcaggacaacttctggggggagaagaatgccggctttgacgtgctgtatcac
aacatgaagcacggccagctggcaaccaaggagcttgctgaattcatccgagaaagggca
gccattgaggagacttactccaaatcaatgagcaaactggcaaaaatggcgagcaatggg
agtccacaggggacgtttgcacccatgtgggatgtgttcagggtgtcctcagacaaagtg
gctctctgccaccttgagctcatgaaaaagatgaacgatctcatccgcgacattaacaaa
tacggagaggagcaggtcaaaattcacagaaagacaaaggagaagatggtggggaccgta
gaggcagtgcaggctctgcaggtacagagcactcacctccagaagtcaaaggagggttac
cacgccaaatgtttggagctggaccggctcaagaaggagggggccccgcagaaagaactg
gagaaggcggagctgaagtcaaagaaagcggcggagtcgttcgcattgtgcatcgagaaa
tacaaccgcgtgggaggagagtttgagcagaaaatgagcgagtccgctcagaatttccag
gaaatcgaggaagttcatctgcggcagatgaagcagctgatgaaaagttactcgcactcc
atagaggacacccacgtccaggtgggacaggtgcacgaagagttcaagcagaacgtggag
aacattggcatcgataccctcattcagaagctggctgaacaaaagggcacgggcaaagac
agaccagctccagttgggtttgaagagtgcatgacagctctggcccctgaaggcggtaaa
aagagtcgtgcaaaagccttcagaatccccggccttggcaagagagacaaggagccagac
tcgacggattcagctgtgatggatgaaatgagttcgccgctggaagtggacgatgaagga
tttgtcatcagagctgacagtaatcagaatggctgctctgaagggaagaacaacaccttc
tactccagcgattcagactttgatgacgaggagcccaaaaagttccacatccagatccga
ccggtgaccagcggcaatcgcagcagctccgtggccacagagaaggagctgaaagccaca
gtgggagcgctcactctgccgcccaacagaggagcccggcagcaggttgcaaacaaacga
aatctctccagaaactcgagcagtgcaggaggccgatcagaagaaacagaggcaccctcg
cacagggacggagagcagagcggcctctgcaggtccacttccagccccaatcacagcagg
ttaagttcaacagcgtccggttctgacagtctttttggacctccgttggagacggccttc
aaatccaaaagctttgatagccaagaacagctcagagagcagaacacttttggagcttct
gaatatgctgccttctcatctgactcgtcctcccccgagaatgtcgaagactcaggcctg
gactccccctcccatcagcctttggggccttcccctgagccggcggggtgggcagcttgg
cccccggcatcacagagcaaagatcagacacaaaccctggggcggccggtggatcctttc
ctttctgctttccacgagcccaaccctggacgcagcacaaactcgcaggacgaccacgtc
tggtctgccccctcgtcacgcccttcccgtggacccccagatgcagaacccccgtctcgg
ttcactgccttttctcacttccctcaacccgagatggagccttctgtgtggaactgcaag
cacattcctactgaggaccccttcctagccgtcttcgagaggacggtcactcaggagacg
ttaaacttttccgacccctggacgcgcccaccccctcgccagctgtcccaggacggcagg
ggcaaggaggttcgtggagaccccttttccgtctcgcttgctgacaccaaaacactccca
acccactcctcctcatcatcgtcgtcgtcatccaaccgaaaagacagagacagaaagcgg
gaccgcagcctcccccctcccgtcacctcagacgacccgttcgcaatcacaatgattggc
agtccgactcatcagtcttctctggctgcagcagctggggtaatgcccccacacgggaac
tccagcggcccccccaccagcagcagcagaccgggggctgactccaactctttacccgca
gctcagccaaagaaggagccgccgcactggaactctgtccacaacccgtttaacgaggtt
tccagctccaggtcacaggaaggagggggcaaaggagaggcaagaaaggggggtgagagg
agaaaacatcggtcttcagagagcgaaccacgcaggaacgctcctcccctcaccaggcat
tcaggaccccaggaggacctttgtttctcaacggacaaagatcaggactgtctgaacctg
aaccagatcacctgcaccgtcagctctcagaggggctccaaacacaacttcagacaggac
acagctgaagtggcggcagctgctcctcagagagcgtcccacgccaaaaggtctgcgggc
cggctgagtggctgtgaaaggtctcggtcactgtgttcttctccactgccggagcccgct
ccttccttcacctcctcttcctcctcgagccccagtgagtgggggactcaggtcagagat
agtgattgggggtggcagaaccgtgtgcccagtcctgctagaatgggacaggcctcacct
ctgtcctatcagcatcaggatcttcagcagaggacaatgcatctctccagaggtcccagt
cccatttccttgagcgcacaggaggcctggcctgtagctgcagccataaccgagtacatc
aatgcgtactttaaaggaggacagcacaaccgctgcctcgtcaagatcacaggagacctg
accatgtccttcccagcaggaatcactcgcattttttcagccaaccccaacattcccatt
ctcagctttaggctggttaacatttcaaggatcgatcacttcttgcccaatcaaaagctg
ctgtacagtgatccgtctcagagtgatcccgacaccagagacttctggttcaacatgcag
gctctgcagctgcacctgcagagagaggctgagctcaaccccaaggcttcgtactacaac
gtcggcctgctcaagtatcaggtgtcgtctcaggacccgggcagagctcctctcctgctg
tcggccgagtgtcagcggagcggcacggtgaccagagtgtccctggattatcactgctgc
cccgccacggcgccctccacccagctgacctccgtccaggtgctgctgcctctggaccac
accgccacagacgtgcagtaccagcccccagcctcctggaacgccgaggaacgccggctg
ctgtggaaactgcctaacctgtcccccaccaaccacagcaaaggctcggggacgctgtgt
gccagctggcagtgcctggaggttccccgaggcccccctcccagcctggctgttcagttt
gtgggctctggcacgtcgctgtcaggcatgggcgtggagctggtgggcagccgctatcgc
atgtcgctggtcaagaagaggtttgccacaggaaagtacatggcaggctgctctttatga
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integrated database retrieval system