Oryzias melastigma (Indian medaka): 112150386
Help
Entry
112150386 CDS
T07439
Name
(RefSeq) synphilin-1
KO
K04558
synphilin-1
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
112150386
NCBI-ProteinID:
XP_024134424
Ensembl:
ENSOMEG00000004441
LinkDB
All DBs
Position
LG9:15496280..15517239
Genome browser
AA seq
915 aa
AA seq
DB search
MEPPEYLDLDEIDFSEDSVYSVSSLKNIPELSRRSDVPAEDRAAPPISWSRSVSSHGSGG
IKPGGLAEVHSKFRPVKRVSPLKHQPETTDSDSEGKEQALGEQEELSKDDPSSAKHTNPP
TPLDGSGVKVKGPGSGMGEGGSPQALFGELEHYDLDMDEILDVPYIKSSQHMSTLPRAAL
DKRSVTGGNGGGGTLDRSRGGALKSSALPHNEPMSLGSSSQTQFCVLSPLKWSDLRKSRS
MDPDLHLLNRSPGGGGYQPEPLSSSLSSFSDADKLLSARVFPDSQRPAVDPSGGSGLVFP
LPGCSVSRQDSTKAWTPGAGSGGVALRGFGLAGGEVDEETKKKQNIINIVREGQISLLPH
LAADNLELIRDEDGNNLLHVSASQGHADCLQHLTSLMGEDSLNERNSQQLTPAGLGVKNG
HLECVRWMVSETEAIAELSCTREHPSLIHYAARYGQEKVLLWLLQFMQEQAISLDEVDQN
GNTAVHVAAQYGHLTCIQTLVEYGSNVTVQNQQGERPSQSAERQGHTTCARYLVVVETCM
SLASQVVKLTKQLNEQAADRVSLQKQLQRLMDPNKGEGTPSRSPSSHQPSVEAWPEMMLT
AEGTPGDAHWSVRQGGVGPDSVLRQLLGKDVPDSLCPRERLPPPAGLGREGPGPAGGRRL
GLVERRELKLARLKQIMQRSLSESDSDGYPPEEGKNQGGAHPNQGGAHPGTQRPDRPTHL
PITEEEPTPDSLHLMMKKQLSAPSSSAERRLAFSLTGSKSADSIGVNPSPTSSDPEAADG
KTVDTFNDTQDGQKVATSPKSALKSPSSRRKTSQNLKLRVTFDEQVHKSSNQEAEPPKAP
QGRGGASAGGSESKRPFGAFRSIMETLSGNSNHNNNTQPGSTHKPPPSHGSPSRKSESKS
SPGGGAKSKSKSSNV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcctgagtacctggacctggatgagatcgacttctctgaagattcagtgtac
tccgtctcctctctgaagaacatcccggagctgtcccgcaggagcgatgtgccggccgag
gacagagcagctccgcccatcagctggagccgcagcgtctcctcgcacggcagtgggggg
atcaagccgggggggctggctgaggtccacagtaagttccggccggtgaagagggtgtcc
cccctcaaacaccagcctgaaaccacagactcggactctgaggggaaggagcaggcgctg
ggggagcaggaggagctcagcaaggatgacccctcctctgccaaacacactaaccccccc
acccccctggacgggtctggggtgaaggtgaaggggcccggcagcggcatgggggagggg
ggcagcccccaggctctgttcggggagctggagcactatgacctggatatggacgagatc
ctggacgtgccttatatcaagtccagccagcacatgtccacgctgccgcgagccgccctc
gacaagcgctccgtgacggggggcaacgggggtggaggcacgctggacaggagccgaggg
ggggccctgaagagctcagctctacctcataatgagcctatgagtttgggcagcagctcg
cagacgcagttctgtgtcctgtctccgctgaagtggtcagatctacggaagtccaggtcc
atggacccagacctccacctcctcaatcgctctccaggtggggggggttaccagccggag
cctctgtcctcctccctgtcctccttctcagatgcagacaagctgctgtccgctcgcgtc
ttcccggactcccagagacccgctgtggatccttcgggggggtcgggactcgtcttcccc
ctgccaggctgcagcgtgagcaggcaggacagcaccaaagcgtggacccctggtgctgga
agtggaggagtggcgctgagggggtttggattagcaggaggggaagtggatgaggagacc
aagaagaagcagaacatcatcaacatcgtcagggaggggcagatctcgctactgcctcac
ctggcggccgacaacctggaactgatcagggacgaggatggaaacaacctcctgcacgtc
tccgcctcccagggccacgccgactgtctgcagcatctcacctctctgatgggcgaggac
agcctgaacgagcgcaacagccagcagctgacacccgccggcctgggggtcaagaacggt
cacctggagtgtgtgcggtggatggtgagtgagacggaggccatcgctgagctgagctgc
acccgagaacatcccagcctgatccactatgcagcacgatatggtcaggagaaggtcctg
ctgtggctgcttcagttcatgcaggaacaggccatctctctggatgaagtcgatcagaac
gggaacacggccgtccatgtagcagctcagtacggacacctcacctgcatacagactctg
gtggagtacggctccaacgtgacggtccagaaccagcagggtgagcggccctcccagagt
gccgagcggcagggccacaccacgtgtgctcggtacctggtggtggtggaaacgtgcatg
tcgctggcctcacaggtggtcaaactcaccaagcagctcaatgagcaggcagcagacagg
gtcagcttacagaagcaactccagagactgatggaccccaacaagggagaggggacgcca
tccagatctcccagctcccatcaaccctcagtggaggcgtggccagagatgatgctgaca
gcagaggggactcctggcgacgctcactggtcagtccgtcagggaggggtggggcccgac
tctgtgctgcgccagctgctggggaaggatgtgccggactccctgtgtcccagagagagg
ctgcccccccctgccggccttggcagagaaggcccggggcccgccgggggccgcaggcta
ggactggtggagaggcgggagctgaaactggcccggctgaagcagatcatgcagcgctcc
ctgagcgagtcggactctgacgggtatccacccgaggagggcaagaaccagggcggggcg
cacccgaaccagggcggagcgcacccaggcacgcaaaggcctgataggcccacccacctg
ccaatcacagaagaggagcccacgccagactccctccacctcatgatgaagaagcagctc
tccgccccctcctcgtcagcagagaggaggctggccttctctctgacgggatccaagtca
gcagacagtatcggcgtcaacccctcccccacctccagcgaccccgaagccgctgacggg
aaaactgtggacacattcaacgacacgcaagacgggcagaaagtcgcaaccagccccaag
agcgccttaaagtcgccctcgtcccgcaggaaaacctcccagaacctcaagctgagggtc
accttcgacgagcaggtccacaagagctccaatcaggaagcagagcctcccaaagccccc
caggggcggggcggcgcctcagcagggggctctgaaagcaagcggccgttcggggcgttc
cgctccatcatggagacgctgagtggcaactccaaccacaacaacaacactcagccaggc
tccacccacaaacctccccccagccatggctcccccagcaggaagtcagagagcaagagc
agcccggggggcggagccaagagcaagagcaaaagcagtaacgtttga
DBGET
integrated database retrieval system