Oryzias melastigma (Indian medaka): 112150404
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Entry
112150404 CDS
T07439
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112150404 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112150404 (hnrnpm)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112150404 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
HnRNP_M_NLS
Lipoprotein_18
Motif
Other DBs
NCBI-GeneID:
112150404
NCBI-ProteinID:
XP_024134488
Ensembl:
ENSOMEG00000013075
LinkDB
All DBs
Position
LG4:7690077..7698976
Genome browser
AA seq
698 aa
AA seq
DB search
MSNEQAEIAIENANQPPEQQQGEMNGKAKPESNLSRKERPQKRGGGGRFEPYGNINKRYR
VVVSNIPYDVKWQTLKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKAVEKV
NKHNLNGRPLKVKEDPDGIISQREISKCQGGGPPVGPGGMGGMGGMGGMGGMGGMGGMLG
GMGGGMDRMGPGPSGPMVSIPPSLMNNPNIPNEVIHGLQAGRIGSTVFVANLDYKVGWKK
LKEVFGMAGMVVRTDILEDKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRTMHVKLD
EKSLPKDFGPPDRSAALPRGLSGVGLGLGPGGQPIDATQLNRGGGGGMGNMGPGGMDGMG
FGNMGGRMGGGGGMDNFGGMNNMDRFGSSGMGRMNEMDRGIGGAFDREFGRNEMGMSRNN
FGDSFERGMGNSMGMDRMGSGMDRLGGNMDRMGGMDNRMGMDRMDRVSDLDRMGTGFDRM
GSGMDRLGPGMDRLGPGLDRMGSGMDRMGPTGFDRLGSSNLDRMSSNMDFSSPMGMDRMG
NTGLDRMGSSFDRMGSTGGIDRFPPGGLDRMNSGMDRMGSGGVGGQFDRSGDVNRGFGGN
SFGGAGGAGPGTGGGNLRKGCQIFVRNLPFDFTWKNLKDTFNTCGMVQYADIKMENGKSK
GCGVVRFDSPETAERACRTMNGFRLSGREIDVRIDRNA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgagcaggccgaaatcgcgatcgagaatgcaaatcagccgccggagcagcag
cagggagaaatgaatggaaaagccaagcccgagtccaatctgagcaggaaggagagacct
cagaagaggggtggaggtggccgatttgaaccctatggcaacataaacaaacgataccgc
gtggttgtcagcaacattccctatgatgtgaaatggcaaacccttaaagacctgatgaaa
gaaaaagtgggtgaggtaacgtacgtggaacacttaatggacgcagaaggcaaatcaagg
ggttgtgctgtggttgagttcaggactgaagagctaatgaagaaggctgtggaaaaagtt
aacaagcataatctaaatggaagacctcttaaagtgaaagaagatcctgatggaatcatt
tcacaaagggagattagcaaatgtcaaggtggaggtccaccagtaggccctggcggaatg
ggtggaatgggtggaatgggcggtatggggggaatgggaggaatggggggaatgttggga
ggaatgggtggtgggatggaccgtatgggtcctggaccaagtggtcccatggtcagtatt
cctcccagcttgatgaacaacccaaacatccccaatgaggtcatccacggtctccaggct
ggcaggattggaagcactgtatttgtggcaaatctggactacaaagttggttggaagaag
ctgaaagaagtgttcggcatggccggcatggtggtcaggacggacattctggaggacaag
gacgggaaaagcagagggatgggcactgtaacattcgaaatgccaatcgaagcggtccaa
gctgtctccatgttcaatgggcagcttttattcaaccggaccatgcatgtcaaactggat
gaaaaatctcttcccaaagactttggaccaccagacagatcagctgctttgcctcgtggc
ctcagcggtgttggtttaggtctaggacctggtggtcagcctattgatgctacccagctc
aacagaggcggtggaggcggcatggggaacatgggtccaggaggaatggatggaatggga
tttggcaacatgggaggtcgcatgggaggaggtggaggaatggataactttggcggaatg
aacaacatggaccgttttggctcttctgggatgggcagaatgaatgagatggaccgtggg
attggtggtgcttttgacagggaatttgggagaaatgaaatgggaatgtctcggaataat
tttggagactcctttgaaagaggaatggggaactctatgggtatggaccgcatgggttct
ggaatggatcgtctgggaggcaacatggatcgcatgggagggatggacaaccgaatgggt
atggacaggatggatcgggtgtctgacctggaccggatgggaaccggatttgaccgcatg
ggctctgggatggaccggttggggccaggaatggaccggctcggtccaggcctggaccgc
atgggctctgggatggatcgcatgggccctactgggtttgatcgcttgggctcatcaaat
ttggatcgtatgagcagcaacatggacttcagctccccgatgggaatggatcggatgggc
aacaccggcctcgaccgaatgggaagcagcttcgaccgcatgggatccacaggtggcatt
gaccgctttccccccggcggcctggaccgcatgaactccggcatggatcggatgggatct
ggaggtgtggggggtcagtttgatcgctccggtgatgtgaatcggggatttggtgggaac
tccttcggtggagccggaggtgcagggcctggaactggaggtggcaatctgaggaaggga
tgccaaatctttgttagaaacctcccatttgattttacctggaagaatctgaaggatact
ttcaacacctgtggtatggtccagtacgctgatataaagatggagaatgggaagtccaag
ggctgcggcgtggttcgcttcgacagccctgagaccgcggagcgtgcgtgccggaccatg
aacggctttcggctgagtgggagagagatcgacgtgaggatcgacaggaacgcataa
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