Oryzias melastigma (Indian medaka): 112150444
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Entry
112150444 CDS
T07439
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112150444 (syde2)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112150444 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
112150444
NCBI-ProteinID:
XP_024134556
Ensembl:
ENSOMEG00000009083
LinkDB
All DBs
Position
LG4:16882559..16928980
Genome browser
AA seq
1576 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATLGGGFGSAAAANGGHEGKAKVSDEASGVVSLAGLDLS
AERMSTYENCAGGQTQLSGGVAVVPQSCAAELAASPPSSGGRVNKELPGVTLQSDPPFGG
EEVRSQPGFPHVPRKHSVSFPRQCRVGDSIGFGDNPVSQRAQVQAGAPQPTEGKGGHPPV
QVLALQEPSNQILEKDDPNSRNMEVFTPNLENWGPAQTFFPTQLHIYVSQEEPLRSPLDS
EDEDYYDNEILPFYETMRPKLDGDRVEGSEPGQGRGQVESAQETDRLRNRLQEAYYLLIN
AMNDINLEVQQTNSGLTERQAASSCSSRSRDSLCSKNIDSDSWSSGGDHSPQQVSDTDSL
LLCLAGALESRARLISKSMTNLSSTKRPTLLRCASDGAIRYQSGPSACAQAPELQHGHDD
QEAAETKTDDGVTQAGELSEPQMLCRDDSSEELLGDCGEQLNESSGSVNSLTGSCDSNCE
TPPHPGQDGDQDLVQVRARVSGSASKAHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPH
QDRLRPQAHPVRCKPALQGGKSVKAKSPQQQPAFIENAQMAHTNGRSTSELSPWRPQQIS
ITVSKKRNWLQQSYQAKNFCTREDLHGMLGVEEEGSQGSHQPPPPPSPSPDGLRSSAVAP
PRPVRLQLPQMGDGQKKGSPQSRSVDSAEENDADDEGEIWYNPIPEDDEPDVSHRPSVRV
LLPQDPHRKLSRAGDAVQGGRSLEGHSGSVPEARVEDSSQGNAAHSTQAPHLHRQMLVCK
PQEEGGASASRPTECLDLPNVVGFSPPSSPNPTKKSSSINWSFPDKIKSPRTVRKISMKM
KKLPELSRKLSVKGTQSSSNNSSNGSSQLEPRAQSPRANGKGSEVFAQTSGPLRLASSGV
GQASCNVISRYHLDSSVSTQNSYSKKKNNGSSKSASKGGYLSDGDSPELVAKSGKHGTAE
GKGGRSKETEGGVGNSRLNGTDLDIDAFRHYSFTEQPKCTQYISGLMSLHFYGAEDLKPP
RIDSRDVYCAIQVDSVNKARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWEPTPKR
NRVCCHGTVVLPSIFRVTRFHQLAVKLEPRGLIYVKLSLIEQWQNSLDGGPDADREPQVF
GVEAWRVVERENSGLMVPLIISKCINEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSY
AVELSESVYPDINVITGVLKDYLRELPFPLINKPLYEAVLESMATKPLKMGAAGCENEQA
DSEHTVSLLEHLPEVERMTLRMLLNHLKRVASHQDVNKMTCQNLAVCFGPVLLSQRQEAS
CHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDALDPAVSNTPLVSDLLSAPPLRR
RKERPQVLNLTEAEMAGVLRPKPGRLDSPSNRYAGDWSGCGESYFPSEMLLPPNKEEADY
DDVPSEDMERLEEVQERQEEAVEEEDNVSEEPLQKEEVTKEEEKVEEENEENEEEEDGSN
KKEPLEEEQRVEERVYSHILPPRLPKEHTYQAYMKIQDISPVLNNRVNLRDLQESIDTLI
GNLERELNKNKLNFGY
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctctgcggaggactttattagccaaactccgggggaagaagtccaagaaa
ggagcgacgctcggcggtggattcggctccgccgctgcggcgaatgggggccacgaaggt
aaagcaaaagtttccgacgaggctagcggggtagtttcgctcgcggggctggatctctcc
gccgagagaatgagcacctacgagaactgcgctggaggacagacgcagctgagcgggggg
gtcgcggtagtcccgcagagttgcgcagctgagttggccgcctcaccgccgagcagcggg
ggcagggttaacaaggagctcccgggggtcacacttcaaagtgacccgccgttcgggggg
gaggaggtcaggagccagccggggttcccgcatgtcccgaggaaacactcggtgtcgttc
ccgcggcagtgcagggtcggagactcgatcggctttggggacaaccccgtttcacaaaga
gcgcaggtacaggcgggggcccctcaacctacagagggtaaggggggacaccccccagtg
caggtgttagccttacaggaacccagcaaccagattttggagaaagatgaccccaactcc
agaaatatggaagtttttaccccaaatctggaaaactgggggccagcacaaactttcttc
ccaacccagttacacatttatgtgtctcaggaggagcctctgaggtcccctttagacagc
gaagatgaggattactatgacaatgaaattctacccttttatgaaacgatgagaccaaaa
ttggatggtgacagagttgagggttcagagcccggtcagggcagaggacaggttgaaagc
gcacaggaaacggacaggctcagaaaccggctgcaggaggcctattatcttctcatcaac
gctatgaatgacatcaatctggaagtccagcagactaacagtggcttaactgagcggcaa
gccgcctcctcctgcagcagccgctccagagatagcctgtgctccaaaaacattgacagc
gactcctggtcatcaggaggcgaccacagtcctcagcaggtgtctgacacggactcgctc
ctgctctgcctcgccggagctctggagtcaagggcgaggctcatcagtaagagtatgaca
aacctatcgtcaaccaaaagacctacgttgttgcgttgtgcaagtgatggagccatcagg
tatcaaagcgggccctcagcttgtgctcaggcgcccgaactgcaacatggacatgatgac
caagaggcagcagagacaaaaacggatgatggcgtcacacaagcaggtgagctgtctgaa
cctcaaatgctttgcagagacgacagcagcgaggagttacttggagactgtggcgagcaa
ctcaacgagagcagcggctcggttaacagcctgacagggtcctgcgacagcaactgtgag
accccgcctcatcctggtcaggacggcgatcaggacttggttcaagtccgagcgcgggtg
tccggttccgccagcaaagcccatggtgttacggtaaacaagatgcaggagtggatgcac
aaagggcgcctgctgtcatccgagatgaaacagcggatcgagggctcctctctcccacac
caggaccgcctccgtcctcaggctcaccccgtccgctgcaaaccggcgctccaaggcgga
aaatccgtcaaggccaaatcgccccaacagcagccagctttcattgagaatgcccaaatg
gcgcacaccaacggccgatccaccagcgagctctcgccgtggaggccgcagcaaatcagc
atcactgtctccaagaagcgcaactggctgcagcagagctaccaggctaagaacttctgc
acccgagaggatctgcatgggatgctgggagttgaggaggagggcagccagggttctcat
cagccaccacctccccctagtccctccccggacggtctgagatcctcagcggtagccccg
ccccggccagtccgcctgcagctacctcagatgggcgacggtcagaaaaaggggtcccct
cagagtcggagcgtggactcagcagaagaaaacgatgcagacgatgagggggagatctgg
tacaaccccatacccgaagacgacgaacctgacgtctcccaccgaccctcggtgcgagtg
ctgctcccgcaggacccccacaggaagctaagcagagcgggggatgcggttcagggtggg
agaagcctggagggacacagtggaagtgtgccagaggcccgcgtggaagattcgagtcag
gggaatgctgcacattccacacaggctccacatctgcacagacagatgcttgtgtgcaaa
cctcaggaggagggaggggcttctgcaagcagaccaacagaatgtctggacctgcccaat
gttgttggcttctcacctccttcaagtccaaacccgaccaaaaagagtagctccattaac
tggtccttcccagacaagatcaagtctccgcgtacagtccggaagatctccatgaaaatg
aagaagctccccgagctcagtcgaaagctcagcgtcaagggaacccaaagcagcagcaac
aacagtagtaatggaagcagtcagctggagcccagagcccaatccccacgggccaacggc
aaagggtctgaggtttttgcgcagacttccggccctttgcggttagcgtcttctggagtg
ggccaggcgagctgtaatgtgatctcgcgctaccacctcgacagcagcgtgtctacgcag
aatagctacagcaagaagaaaaataacggcagctcaaagtctgcgagtaaaggaggatac
ctgagtgacggggactcaccagagctggtggccaaatctggaaaacatggcactgctgag
ggtaaaggggggagaagcaaggagacggaaggaggtgttggaaactcaagattgaacggc
acagacctggacattgatgctttccgtcattacagcttcacagagcagcccaagtgcacc
cagtacatttctggactgatgagtcttcatttttacggagcagaagacctcaagccccca
cgcatcgattctcgggatgtctactgtgccatccaggtggactcggttaacaaagcacgg
accgcgctcctcacatgtcgaacaactttcctggacatggaccacaccttcaacatcgag
ttggagaatgcccagcacttgaaactggtggtgttcagttgggagcccacgcccaaacgc
aaccgcgtgtgctgccacggcaccgtggtgctgccgagcatcttcagagtgacgcgcttt
caccagctggcggtgaagctggagccgcgggggctgatatacgtcaagctgagcctgata
gagcagtggcagaactcgctggacggggggcctgacgcagaccgggagccgcaggtgttt
ggtgtggaggcgtggcgggtggtggagagggagaactcaggactgatggtgccactgatc
atcagcaaatgcattaacgagatcgagaagagaggctgccaggtggtgggtctctaccgc
ctgtgcggttctgccgccgtcaagaaggagctgcgtgaggcgtttgaacgcgacagctac
gccgtggagctgagcgagagcgtgtacccggacattaacgttatcacaggagtgctgaag
gactacctgcgcgagctgcccttccccctgataaacaagcctctgtacgaagctgtgctg
gagtccatggccaccaagccgctgaagatgggagcggcgggctgcgagaacgagcaggcc
gactcggagcacaccgtcagtctgctggagcacctgccggaggtggagaggatgactctg
cggatgcttcttaaccacttgaagcgagtggcgtcccaccaagacgtgaacaagatgacg
tgccagaacctggctgtgtgtttcggcccggttctacttagccagcgtcaggaggcgtcc
tgccacaccaaccgcgtcttcatcgactctgaggagctggcgagcgctctgcacttcaaa
aagcacattgaagttttgcactacctgctgcagctctggccagtcgtagacgctctcgac
cctgcggtctccaacactcctctggtgtccgaccttctctcagctcctcccttgcggcgg
agaaaagagcgcccccaggtcctaaacctcaccgaagcggagatggcgggtgttctgcgg
cccaaaccggggcgactggacagcccgagcaaccgttacgctggtgactggagcggctgt
ggtgagagttacttcccctctgaaatgctgctgcctcccaataaggaggaggcggactac
gacgacgttccctccgaggacatggagaggctggaggaggtccaagaaaggcaggaggaa
gcagtcgaagaagaggataacgtctcggaggagccgcttcagaaagaggaggtcacaaag
gaggaggaaaaggtggaagaggagaatgaggagaacgaggaagaggaggacggctcgaac
aagaaggagccgttagaggaggagcagagggtagaggagagagtgtacagccacatcctt
cctcctcggctacctaaggagcacacctaccaggcgtacatgaaaatccaggacatcagc
cctgtgctgaacaacagggtgaacctgagagacctgcaggagagcatcgacaccctgata
ggaaacctggagcgagagctcaacaagaacaaactcaattttggatactga
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integrated database retrieval system
