Oryzias melastigma (Indian medaka): 112150465
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Entry
112150465 CDS
T07439
Symbol
irf4l
Name
(RefSeq) interferon regulatory factor 4 isoform X2
KO
K09445
interferon regulatory factor 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112150465 (irf4l)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
112150465 (irf4l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
112150465
NCBI-ProteinID:
XP_024134587
Ensembl:
ENSOMEG00000014211
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All DBs
Position
LG4:complement(20729372..20737304)
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AA seq
449 aa
AA seq
DB search
MNLDVDYGGTGSSGNGKLRQWLIEQVDCGKYPGLVWENDEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYR
IIPEGAKKRPRQDDSPTSPVGYQMHPSYPTMPTQMTPYISSPECSWRDYCPEQTSLTELS
FAQCPCPPRSLPWQTPSIENGYQLRASIYSYGPDSQPSPFSLDASIRSAEALSDLRLHVS
VYVRETLVREVTVTSPEGCHLMPCPPEKHYLTAGGPEVVPLPLDSLSGLRRTDECPPSPP
SVLERGVLLWMSADGLYARRLCQSRVYWQGGLSPYGDKLNKLEREVTCKLLHTQDFLTEI
QSFGFHGRPPSRFQVLLSFGDECLDPQRQRRALTVQVEPLFARQLLYYAQQTSSHYYRSY
ELPGVTDHINASEDYQRAITHHHASSLQE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgacgtggattacggaggcaccgggagcagcggcaacgggaagctgcgccag
tggctgatcgagcaggtggactgcggcaaataccccgggctggtgtgggagaacgacgag
aagagcatcttcaggataccatggaaacacgccgggaagcaggactacaaccgggatgag
gatgccgcgcttttcaaggcctgggcgctctttaaaggcaagttccgtgaggggatcgac
aaaccggaccctccgacctggaagacgcgcctgcgctgcgccctcaacaagagcaatgac
tttgaggagctggtggagaggagccagctggacatctctgacccctacaaggtgtaccgc
atcatcccagagggcgccaagaaaagacccagacaggacgacagcccaacgagtcccgtg
ggctaccagatgcacccctcctaccccaccatgccaactcagatgacgccctacatttct
agtccagagtgcagctggagggattactgtcctgagcagacatctttgactgaactgtcc
ttcgctcagtgtccttgtcccccccgcagcctgccgtggcagaccccatccatagagaat
ggctaccagctccgagcctccatttactcgtacggccccgacagtcagccctcgcctttc
tcgttggatgcaagcatcagatcagcggaggcactttcagatctccgtctccacgtgtcg
gtgtacgtacgggagactctggtgcgggaggtgaccgtcaccagtccggagggctgccac
ctcatgccgtgcccgccggagaagcactacctgacggccggaggccctgaggtggtgcct
ctgcctctggacagtctctcgggcttgcggaggacagacgagtgtccaccgagtccgccg
tccgtcctggagaggggagtccttctgtggatgagcgccgacggactgtacgcccgcagg
ctgtgccagagtcgggtttactggcagggaggcttgtcgccatacggagacaaactcaac
aagttggaaagagaagttacctgcaaactgctccacacacaagacttcctcacagagatc
cagagtttcggattccacggccggccgccgtctcgcttccaggtgctgctcagcttcgga
gacgagtgcctggacccccaaaggcaaagacgggccctcactgttcaggtggagcctttg
tttgccaggcagctcctgtattacgcccagcagaccagcagccactactaccgcagctat
gaacttccgggggtcacagaccacataaacgcctctgaggactaccagagggccatcaca
caccaccacgccagcagcctgcaggagtga
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