Oryzias melastigma (Indian medaka): 112150499
Help
Entry
112150499 CDS
T07439
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112150499 (sox2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112150499 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112150499
NCBI-ProteinID:
XP_024134650
LinkDB
All DBs
Position
LG4:complement(18149827..18152273)
Genome browser
AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTSGTGTNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHAGLNAHNPSQMQPMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQTTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccctgctccccagaccaacacggggggc
acgggcaacaccaacacgtccggcaccggcaccaaccagaaaaacagcccggagagggtc
aagagacccatgaacgccttcatggtgtggtcccgaggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagataagcaagaggcttggtgcagagtggaaactt
ctgtccgagagcgagaagagacctttcatcgacgaagccaagaggctgagggccctgcac
atgaaggagcacccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaaatacaccttaccgggcgggctgctggctcctggaggaaacggtatgggcacc
ggggtcggtgtcggggtaggggccggcctgggcggtggggtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctg
agctaccagcacgcgggtctgaacgcgcacaaccctagccagatgcagcccatgcaccgc
tacgacatgagcgcgctgcagtacaactccatgaccagctcccagagctacatgaacggc
tccccgacctactccatgtcctactcccagcaaaccacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcctcgtcccaccgggccgccccgggctgccaaagcggggatctgagggacatgatc
agcatgtatctgcccggggcggaggtcagcgagcagactgcccagaccaggctacacatg
tccggccactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatgtaa
DBGET
integrated database retrieval system
