Oryzias melastigma (Indian medaka): 112150553
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Entry
112150553 CDS
T07439
Symbol
pfas
Name
(RefSeq) phosphoribosylformylglycinamidine synthase isoform X1
KO
K01952
phosphoribosylformylglycinamidine synthase [EC:
6.3.5.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00230
Purine metabolism
oml01100
Metabolic pathways
Module
oml_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
112150553 (pfas)
Enzymes [BR:
oml01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.3 phosphoribosylformylglycinamidine synthase
112150553 (pfas)
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Gene cluster
GFIT
Motif
Pfam:
GATase_5
FGAR-AT_PurM_N-like
AIRS_C
FGAR-AT_N
FGAR-AT_linker
Motif
Other DBs
NCBI-GeneID:
112150553
NCBI-ProteinID:
XP_024134718
Ensembl:
ENSOMEG00000002001
LinkDB
All DBs
Position
LG4:25553361..25567403
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AA seq
1392 aa
AA seq
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MRQKVHACTRYFGGPSTPVLSVCNPTTPGVLTVQEEQRFPGSPESSVNSTNFRRSRELKE
PRAAAMAVVRFYSSQAPDGRALQRAAKLFPHLSLVTELCYNVELTGGESLSAEEKEVLLW
LFRPPLQAEPLSEKPNLTESSEDTLVEIGPRLNFSTAWSTNAVSICRSAGLANVTRVEVS
RRFLIKPKNGKGAGELSGDIKKLIECLHDSMTECVYHRPITSFSVETKRQPVFEVDILGK
GRAALEKANDDLGLAFDSWDLDYYTSMFQRIQRNPTSVECFDLAQSNSEHSRHWFFRGRM
LIDGQEQKETLFSLIMDTQRHSNPNNVIKFCDNSSGIKGVEIECVYPKDPSRASPYETRL
SLRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDVQSAGRGGHVIAGTAGYCFGNLHIPG
YELPWESAGEEWEYPSSFAPPLQVAIEASDGASDYGNKFGEPVLAGFARSFGMRLPNGER
REWIKPIMFSGGLGSIADSHVKKEEADAAHSASSPSGMEVVKIGGPVYRIGVGGGAASSV
QVQGDNCSERDLGAVQRGDAEMEQKMNRALRACLERSDGNPICSIHDQGAGGNGNVLKEL
SEPAGAVIHCSRFKKGDPTLSVLELWGAEYQESNALLLRPSDRSFLESVCQREKCPVDFV
GNITGDGKIVLVDDETGSNDQVDCVRHPVDLQLEWVLGKMPQKEFRLDRVTLTHQPLRLP
AGLSVRDALQRVLRLPAVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSPF
SLEGAATAIGEQPIKGLVCPAAGARMAVGEALTNLMFARVTALKDVKCSGNWMWAAKLPG
EGAYLWEACKAMCEVMSELGVAIDGGKDSLSMAARVGKETVKAPGALVISAYAVCPDITA
TVTPDLEDPDGKGVLLWVPLSPGNHRLGGSALAQCYSQLADCSPDLDRAGLLAACFSITQ
TLLQDRLLSAGHDISDGGLISCLLEMAFAGNHGIDVELSSQGSEVMELLFSEELGVVLEV
SESDVEAVCQRYSDAGVQCHSIGRTCGFGPNAKVRVCVDGQEVLMESLPELRAAWEDTSF
QLERLQANELCVKQEEEGLAKRTQPYFKLSFDPSETPSICQLAGGPPRVAVIREEGSNGD
REMSVSLYMAGFEVWDVTMQDLCCGSLTLNLFKAVVFVGGFSYADVLGSAKGWAATVTYN
PKAKAEFDRFQRREDTLSLGVCNGCQLLALLGWVGEAEDGAGSEVVLTHNRSGRFESRFV
SVGIQESPSIWLRGMEGSALGVWVAHGEGLMQFRSTKAQDLIISGGLAPLRYLDDHGLPT
EEYPLNPNGSPQGVAGLCSRNGRHLAMMPHPERCTLSWQWPWAPRELRPSLAPSPWLCMF
KNAAAWCSNSDG
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagaaggtgcacgcctgcacgcgttactttggcggtccatccactcccgtccta
tctgtctgcaacccaacaaccccaggagtcctgaccgtccaggaggagcagcgctttccc
gggagtccagagtcgagcgtcaactcaacaaactttagaaggagtcgagagctgaaggag
ccgcgcgcagcagccatggctgtggtgaggttttacagcagccaagctccggatggacgg
gccttgcagcgagcagcaaaactcttccctcatctgtccctcgtaacggagctgtgctac
aacgtggagctgacaggtggtgagagtctgagtgctgaggagaaggaggttctcctctgg
ctgttccgtcctcccctgcaggctgaaccgctgtcggagaaaccgaacctcactgagagc
agcgaggacacgctggtggagattggacccaggttgaacttctccaccgcctggtccacc
aacgccgtgtccatctgccgcagcgctggcctcgctaacgtcacccgagtggaggtgtct
cgcaggtttctcatcaagcctaagaatggaaaaggagccggagagctcagcggcgacatc
aagaaactgatcgagtgtctgcatgacagcatgacggagtgcgtctaccatcggcccatc
acctctttttctgtggagaccaaacgacagcccgtgtttgaggtggacatcctggggaaa
ggtcgtgcagccttggagaaggccaatgatgacttgggtctggcctttgactcctgggat
ctggactactacacctcaatgttccagcggattcagcggaaccccaccagcgtggagtgt
tttgacctggcgcagtccaacagcgagcacagccggcactggttcttccgcgggcgcatg
ctgatcgacgggcaggagcagaaggagactctattcagcctcataatggacacccagcgg
cacagcaaccccaacaacgtcatcaagttctgtgacaacagcagtggtattaaaggtgtg
gagatcgagtgtgtttatcccaaagatccttccagagcgagcccgtatgagacccgactc
tcattaagacacgtcattttcacagcagagacgcacaacttcccaactggcgtggctccg
tttagcggggccaccactggaaccggcggccgcatccgagacgttcagagcgccgggcga
ggaggacacgtcatcgctggaactgcaggatattgctttggaaatctgcacataccaggg
tacgaactcccctgggagtctgcaggagaggagtgggagtatccctccagctttgcccct
cccctgcaggtggccatcgaggccagcgatggcgcctcagactacggcaacaagtttgga
gagcctgtcctagcaggttttgcccgctctttcggcatgcgtttgcctaacggggagcgg
cgtgagtggataaagccaatcatgttcagcggcggcctcggctctattgcagactcgcac
gtgaagaaagaagaggctgatgccgctcactctgcttcctcgccgtcaggaatggaggtg
gtgaagatcggagggccggtgtaccggatcggtgtgggtggaggagcggcctcctctgtt
caagtccaaggggacaactgcagcgagcgggacctgggggcagttcagagaggagatgca
gagatggagcagaagatgaaccgagctctcagggcatgcttggaaagaagtgatggaaat
ccgatctgcagcatccatgatcagggggcagggggaaatggtaatgttctgaaggagctc
agcgagccagccggtgccgtaatccattgcagtagatttaagaaaggtgaccccacactg
agcgtgctggagctgtggggggcggagtatcaggagagcaacgctctgctgctgcgcccg
tcagacaggtccttcctggagagcgtgtgtcagagggagaagtgtcctgttgacttcgtg
ggaaacatcactggcgacggaaaaatcgtgttggtggatgatgagactggcagcaatgat
caggtggactgcgttcgccatcccgtcgacctgcagctggagtgggttctggggaagatg
ccgcagaaggagttcaggttggaccgagtgaccctcacccatcagcctctgaggcttcct
gccggcctctctgtccgagacgctctccagagggttttgcgtttgcctgccgtggcctcc
aaacgctacctgaccaacaaggtggaccggtctgtgacggggttggttgcccagcaacag
tgcgtcggtcctcttcacaccccattggccgacgtggccgttgttgctctgtcaccgttc
agtctggagggagcagcaacagccatcggggagcagccaattaaaggactggtgtgtcct
gcagcgggggctcgcatggccgtcggagaggctctgaccaatctgatgttcgccagagtc
acggcgctgaaggatgtgaagtgcagcgggaactggatgtgggcggccaaactccccggt
gagggggcgtatctgtgggaggcttgcaaagccatgtgtgaggtgatgagtgagctgggg
gtcgccatcgacgggggcaaggactctctgagcatggcggcgagagtcggaaaggagacg
gtcaaggctccaggcgccctggtgatctcggcatacgccgtatgtcctgacatcactgcc
accgtcacgcctgatcttgaggatcctgatggaaaaggtgtgttgttgtgggtccctctc
agtccaggtaaccatcgcctgggaggctccgccctcgctcagtgctacagccagctagca
gactgctcccctgacctggaccgtgctggactgttggccgcctgcttcagtataacccag
acgctcctgcaggatcgtctgctaagtgcgggacatgacataagcgatggcggtctaatt
tcctgcttgctagagatggcatttgctggaaaccatggaatcgatgttgagctgtcctca
caaggaagtgaagtcatggagctgctgtttagcgaggaacttggcgtggtcctggaggtt
tcagagtcggatgttgaggctgtttgtcagagatacagcgacgcaggcgtccagtgtcat
agtattggaaggacctgcggctttggaccaaacgctaaggtcagagtctgtgtggatgga
caggaggtccttatggagtccctgcctgaactcagagcagcatgggaggacacaagcttc
cagctggagcgcctccaagccaatgagctgtgtgttaaacaggaggaggaggggcttgcc
aagaggacgcagccgtactttaaattgagctttgacccatctgaaactcccagcatttgc
cagcttgctggagggcctccacgtgtagctgtgatcagggaggagggcagcaatggagat
cgagagatgtccgtctctctatatatggccggctttgaggtttgggatgtcaccatgcag
gatttgtgctgtggttccttaacgcttaatcttttcaaagccgtcgtgtttgtcggcgga
ttcagctacgcagatgttctgggatctgctaaaggttgggctgcaactgttacctacaac
cccaaagctaaagctgagtttgatcgctttcaacgaagagaagacactctgagtctgggc
gtgtgtaacggctgtcagctgctcgcccttttgggctgggtgggggaggcagaggatgga
gcaggctctgaggtggtgctgacccataatcgttcaggcaggtttgagtcgcggtttgtg
agtgtcgggattcaggagtccccgtccatttggctcagaggcatggagggctccgctctg
ggagtctgggttgctcatggagaaggtctaatgcaattccggagtaccaaggcgcaagac
cttatcatttccggtggactcgcccctctccgctaccttgatgaccacggtctgcccacc
gaggagtatcccttgaaccccaacggctccccgcagggtgtggcggggctctgctccagg
aatgggaggcacctggcaatgatgcctcaccccgagcgctgcaccctgagctggcagtgg
ccctgggccccgagggagctccgcccttctttggcaccgtcgccctggctgtgcatgttc
aaaaatgcagctgcatggtgcagcaactcagatggataa
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