Oryzias melastigma (Indian medaka): 112150554
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Entry
112150554 CDS
T07439
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112150554 (si:dkey-183n20.15)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112150554 (si:dkey-183n20.15)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112150554 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
zf-ANAPC11
zf-Nse
Prok-RING_4
AcMNPV_Orf101
Motif
Other DBs
NCBI-GeneID:
112150554
NCBI-ProteinID:
XP_024134720
Ensembl:
ENSOMEG00000001951
LinkDB
All DBs
Position
LG4:complement(25567531..25571475)
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AA seq
209 aa
AA seq
DB search
MHTSCHKESTPPCLSTNTQDWQCPVCLQTPRFPVQTNCGHLFCAPCLLTYWKHGSWLDAI
NCPLCRQKVSVLRNLFYESQSDQQSKQVLAEITDYNRRYSGAPRKMKDYLCDVPLILQLL
ARGMGTMGGLVGLFLFRVALCCVGTVVSISVPLEDHVTPSSSSLETDPSLCGLLGVLDDV
VVVFLLLVCVINVNQQIVPDGGHSAEVTA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaagttgccataaagagtccaccccaccatgtctgtccacaaacacgcaagac
tggcaatgtccggtctgcctgcagacacccagatttcccgtccagaccaactgcggccac
ttattctgtgctccttgtctgctgacctactggaaacatggatcgtggttagacgccatc
aactgtccgctctgcagacagaaggtcagcgtgcttcgtaacctgttttatgagagccaa
tccgaccagcagtcaaaacaagttctggcagaaatcacagactacaacagacgttactct
ggagctccacgaaagatgaaggactacctatgcgacgtccccctcattctgcagctgctt
gcccgaggcatgggcaccatgggaggactcgtggggctgtttctgttcagggtggccctg
tgctgcgtggggactgtggtgtccatctcggtcccgctcgaggaccacgtgactccgtcg
tccagttcgctggaaacagatccctccctctgcggactgctaggcgtcctggacgatgtg
gtggtggtcttcctgctgctcgtctgcgtcatcaatgtcaaccagcaaattgtacctgat
ggaggacactctgctgaagtgacagcctga
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integrated database retrieval system
