Oryzias melastigma (Indian medaka): 112150578
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Entry
112150578 CDS
T07439
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112150578 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112150578 (rexo1)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
RNases
112150578 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
112150578
NCBI-ProteinID:
XP_024134742
Ensembl:
ENSOMEG00000005167
UniProt:
A0A3B3BG93
LinkDB
All DBs
Position
LG4:complement(14476365..14488428)
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AA seq
1237 aa
AA seq
DB search
MLRSTGFFQGIDCPFYTENSDGRSGFSGCNRPYCHFRHKQQRRASYGAPVDVKKQRNRHF
GQKEQGYDPFNPEVGTPPQQENGEPADSGDITGALEIVNRAIEEVRNQVEREKRKLFQIG
DEPYSPSKGAGSSRSNAAKSKAAGSHLGYDPGSYQISSEGYKPSPGCSKYTLDSDSRGLN
SNSMEYVPTSLKKPSAPTQLPSSPPSPKYANSTPSSKCKYTVDSSRPSTDMEYDPLSNYA
AGITVKSKRDTVTQLVSTSCGKTFKLPGTDLLDEGYFIDGKKPCQPSIDANKYTISDSDG
ESSGTEYRPTSLSNLQQRKCIRSGSPFSKERTEGIQVQSKTDDRTHYSDIQECDKNKNHV
EKKKATVGSRVDKSVKPEKVHKLEKDVNKSVSKSCGSSSSKDKGSKNQSKSHGKKDDVKS
TSKDKRSDKVQREGRDEKKSDGKVRTVEKLKRDASKEHKDERESKKLKTSDREKEHNRLK
DSQQKNGQLSSIKRDKDTKKILSKSSSSSSKGTSSVSNDKKKRSITSLNEKRLQDKKQNV
SLSHADLFGDESPDEAEPIVVDSGEESEEILVRKTADTLKRVRLNKRKVSEWTRPSSDDE
SDRNEECKKDDADTIDLSYFQDDLDLDCDPMEECLRIFNESKDVKREDKGRQAKQPSRDS
EEDKSTDCTLATLLPGQKKRVSHLAAKGNVDPPAKTVIRSYKRPTPQEACFQRMQIAQQQ
AAQLSTSFKATSQSSSVGFSGEKKRIAHRPNPSSPKTTPADVKPTASRVLSPSQNPQGVK
TQTTAGILSKTSSTVVHKRVAHTPTMKSSSLKRPVIPSEFGAKVPTNIRQRYLNTFIDEC
IKFCSLEEDAFQMALDEEKVVYERSSSKNIYLNVAVNTLKKLRGKSSCGPPPASRESGLG
AKRRAQSHEEVLGGRLAATTSFTVNRSGKQQEEKLTGATLYRKLKAYLLTEEQLQEHGYP
RVNPESPGRALLYNLPEKKAIADPFTKICCRCGAEYKVNVNGNCVRREECSYHWGRLRRH
KVSGGWETSYSCCTATVGAAGCQIAKQHVQDARKESLDGFVSTFSKSLSPEKNGGVFALD
CEMCYTRQGLELTRVTVIDSELKVIYDTFVKPDSKVVDYNTRFSGVTEEDLENTTITLRD
VQAVLLCMFSSESILIGHSLESDLLALKLIHSSVVDTSVVFPHRLGLPYKRALKNLMADH
LKRIIQDNVDGHDSSEDASACMELMIWKIREDAKVKR
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggtccaccggctttttccaagggattgactgcccgttttacacggaaaacagc
gatggcaggagcggcttcagtgggtgtaacagaccgtactgtcacttcaggcacaagcag
caaagacgggcgtcctatggagcaccggtcgatgttaaaaaacaaagaaaccgtcacttc
ggacaaaaagaacaaggatacgatccctttaatccagaagtaggcacaccaccgcagcag
gaaaatggggagcccgctgactcaggcgacatcactggcgccttggagattgtcaaccgg
gccatcgaggaggtccgcaaccaggtggaaagagagaagaggaaactctttcagattggg
gatgagccgtacagtcccagcaagggtgcaggctcgtccagatccaacgctgccaaaagt
aaagcggcaggctcacacttgggttatgatcctgggagttatcagatctcctcagaggga
tacaagcccagccccggttgcagcaagtacaccttggattcagatagtcgggggctcaac
agtaactcaatggaatatgttcccacttcgttaaaaaagccttcagctccaacacagctc
ccttcttctccccccagtccaaagtatgcaaatagtacaccttcttctaagtgtaaatac
actgttgacagctctagaccgtctacggacatggagtacgacccgctttcgaactacgca
gccggaatcacagtgaaaagcaagagggatacagttacacagcttgttagcaccagctgt
ggaaagacatttaaactcccagggactgacttgctggacgaggggtattttatcgatggg
aaaaagccgtgtcagcccagcatcgatgcaaacaagtataccatctctgactccgatggg
gagagttcgggaacagaatacagacccacctcgcttagcaacctccagcaaagaaaatgc
atcaggtctggaagcccttttagcaaagagaggactgaaggcattcaggtgcaaagcaag
acagatgatcggacgcactactctgacattcaggagtgtgacaaaaacaaaaaccacgtg
gagaaaaagaaggcgactgtaggaagcagggtagacaaaagtgtaaagccagagaaagta
cataaacttgaaaaggacgtaaacaaatcggtcagcaagagttgtggcagcagcagtagt
aaagacaagggctccaagaatcaaagcaagagtcacgggaaaaaagacgacgtgaagagc
acgtcaaaagataaaagatcagataaagttcagagagaaggcagagatgaaaagaaaagt
gacgggaaggtcaggactgtggaaaagcttaaaagagatgcaagcaaagagcacaaagat
gaaagagaaagcaaaaaactcaagacctcagacagggaaaaagaacacaaccggctaaag
gacagccaacagaaaaacggtcaactgagcagcattaaaagagacaaagacacaaagaaa
atacttagtaaaagcagttccagcagcagtaaagggacttcatctgtcagcaatgacaaa
aagaagcgaagcatcacttcattgaatgagaaaagactgcaggacaaaaagcagaatgtg
agtctgagccacgcggatctgtttggagatgaaagtccggatgaggcggaaccgatcgtg
gtggattctggagaagagtcggaggaaattttggtacggaagacagctgacacgttaaaa
agagtacggctcaacaagaggaaagtctcagagtggactcggccctcctctgacgatgag
agcgatcgcaacgaagaatgcaagaaggacgacgctgacaccatcgacctttcctacttc
caagatgacctggacttggactgcgatcccatggaggagtgtttgaggatctttaacgaa
tctaaagatgtgaagagggaagacaagggaaggcaggcaaagcagccttccagggattca
gaggaggataaaagcacagactgcactttagcaactctccttcctggccagaagaagagg
gtgtcccatttagctgccaaaggaaatgttgatccacctgcaaagacggtgatccgctcg
tataaaagacccacaccacaggaggcgtgcttccagcgaatgcagatagcccaacaacaa
gctgctcagctctccacttctttcaaagccacttcacaaagctccagtgttggcttttct
ggagagaagaaacgaatcgcccaccgtcctaacccgtcatcgcctaagacgactcctgca
gatgttaaaccaactgccagtcgagtgttatcgcccagtcagaatccgcagggagtcaag
acccaaactacagctgggattttgtccaagacctcctctacagtcgtgcataagagggtg
gcgcacacacccaccatgaagagctcttcgttgaagcgtcccgtgatcccctctgaattt
ggggccaaagttcccaccaacatccgccagcgctacctcaacactttcatcgatgaatgc
atcaagttttgctctttggaggaggacgcctttcagatggctctggatgaggagaaggtg
gtgtacgagcgcagcagcagcaagaacatttacctgaatgtggccgtcaacacgctgaaa
aagcttcggggaaagagcagctgcggtccaccacctgcctccagggagtctggtttggga
gctaaaaggagagcccagtcccatgaggaggttctgggaggtcgcctggccgccacaacc
agcttcactgtcaacaggtcgggtaaacagcaggaggagaaactcacgggagccactctg
taccggaagctgaaggcgtacctcctgacggaggagcagctccaggagcatggctaccct
agagtaaacccggagtctccaggcagagccctcctttacaacctgccagagaaaaaggcc
atcgcagacccattcaccaagatttgctgccgctgcggtgcagagtataaggtcaacgtg
aacggaaactgtgtgaggagagaggagtgcagctatcactggggacgtttacgcagacat
aaagtctctggaggctgggagacgagctacagctgctgcactgcgactgtgggagctgca
ggatgccagatcgccaagcaacacgttcaggacgcgcgtaaagagtcgctggacggcttt
gtgtcaacgttcagcaaatcgctctcaccagagaaaaatggaggagtgttcgctctggac
tgtgagatgtgttataccagacagggtctggagctgaccagggtgacggtcatcgactcg
gagctgaaagtcatctacgatacgtttgttaaaccagacagcaaagtggtcgactacaac
acgcgattttcaggagtgacagaggaagacttggagaacaccaccatcacgctgagagac
gttcaggccgttctgctctgcatgttcagctcagagtccatcctcatcggacacagtctg
gagagcgacctcctcgctctgaagctcatccacagttcagtggtcgacacctctgtagtg
tttcctcatcgcctcggtttgccctacaaacgcgccctgaagaacctgatggccgatcat
ctcaaacgcatcattcaggataacgtggatggacacgactccagtgaagacgcatcggcc
tgcatggagctgatgatctggaagattagagaagatgcaaaagtcaaaagatga
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