Oryzias melastigma (Indian medaka): 112150699
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Entry
112150699 CDS
T07439
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112150699 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112150699 (efcab7)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
EVC complex
112150699 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EH
EF_assoc_2
SPARC_Ca_bdg
Gpi16
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
112150699
NCBI-ProteinID:
XP_024134931
Ensembl:
ENSOMEG00000008114
LinkDB
All DBs
Position
LG4:complement(15804717..15816042)
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AA seq
609 aa
AA seq
DB search
MSFQASRRSSEDEETFYMQCRAAYLAVFRSSLTNITSKQQLCHGRNPSQATLSKYWTPGT
SKLNFDDFCGILKCERQTEEAELMRAFKAMDVNGDGYILHSALEKVLTTKGEKMTTEEVN
TIFSLADVNKDGKLDYTQFCRLFASTVRQCQSVAMQKLETDGRWKKQNFGSQSYSPPKAG
APSDPTAVEVAAAHRADSDSSLKKDSKPLSRLSSARSRRSSLSNAVTVRASNAKASQVLE
PAGLQDWHHSFRKGCFFVEEDGSISSLQYQLHVPQTTNVYITIHPLNIHTPEKPSSWMTV
DTALFIVSAGETKEEATLVSFTESKDKEKYVWMGELNAGTYYLLPFTSGCRLKKHNKKSF
PGKSVELVYKTDTGELDFTRELREVLSDVFDMIDLDGNGLLSLEEYNFFELRTSGEQCDK
EAWAICKENFDMRKNQLTRQGFMELNLMEATEKDGDSADLWVTLEAMGYNQMLELTEACP
FQIDVYCESSQPSLQTLSLESGPKLLNQAVQKSITAKSGAKALRGHDNVFIFTYKGEHRI
SSVIANKTNQKVTVHVNNEQSRNCCSSRGMTVFAVEIPARTKMVCQHVLPINDKQDWTYN
CLETILPSI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaagcatcacgacgttcctctgaggacgaggagacgttctacatgcagtgt
agagctgcgtatctggctgtgtttcgatctagtttgactaatattacttcaaaacagcag
ctatgtcacggtagaaatccatcccaagcaaccctcagtaaatactggactcctggaaca
tccaaactaaactttgatgacttctgtggaatactcaaatgtgaaagacaaaccgaggag
gcggagctaatgagagcttttaaagctatggatgtgaacggggatggctacatcttacac
agtgcattggaaaaggttttaaccacaaaaggtgagaaaatgactactgaggaggtgaat
actattttctcgttagctgatgtcaacaaagacggcaaactggactacacacagttctgc
aggttgtttgcatcaacggtgcgtcagtgccaatcggttgccatgcagaagcttgagacg
gacgggagatggaagaaacaaaactttggcagtcagtcgtacagccctcctaaggctggc
gcgccctctgaccccacagcagtggaagtggctgcggctcaccgcgcagactctgattca
tctctaaagaaagacagcaagccattgtcccgcctttcctctgctcgcagccgccgctcg
tccctctcaaacgccgttaccgtgagggcaagcaacgccaaggccagccaggtcttagaa
cctgcaggtctgcaggactggcatcacagcttccggaagggatgcttctttgtggaggag
gatgggagcatcagctctctgcagtaccagctccacgtcccccagacaaccaacgtctac
ataaccatccatcctctgaacatccacacacctgaaaagccttcgtcgtggatgacagtg
gacacggcacttttcatcgtgtcagctggtgaaaccaaagaagaggcgactttagtgtcc
tttactgaatcaaaagacaaggaaaaatatgtgtggatgggagagttaaacgctggaaca
tactacctgcttccattcaccagtggctgcagattaaagaaacacaacaaaaagagcttt
ccaggtaaatctgtggaactggtctataagactgacaccggggagctggacttcacccgc
gagctaagggaggtgctgtctgacgtctttgacatgatagacctagatggaaatggcctg
ctgagtctggaggagtataatttctttgagctgaggaccagtggagagcagtgtgataaa
gaagcgtgggcaatctgcaaagaaaactttgatatgagaaagaatcagctgacacgacag
ggtttcatggagctgaacttaatggaggccacagagaaagatggagactctgctgattta
tgggtaaccctggaggccatgggctacaaccaaatgctggagcttacagaggcgtgtcca
ttccaaatagatgtgtactgtgaaagttctcagccatccttacaaaccctcagtctggaa
tcaggaccaaaactgctgaaccaggctgtccagaaatccatcacagcaaagagtggagcc
aaagcactaagaggacatgacaatgtcttcatctttacttacaaaggggagcacagaatc
tcctctgtcattgccaataagaccaatcagaaagtgactgttcatgtaaacaacgagcag
agcaggaactgctgcagcagcaggggcatgactgtgtttgcagtagagattccagccagg
actaagatggtgtgccagcatgttctacccattaatgacaaacaggactggacctacaac
tgcttggaaaccattttgcccagcatatga
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