Oryzias melastigma (Indian medaka): 112150753
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Entry
112150753 CDS
T07439
Symbol
ftsj3
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112150753 (ftsj3)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112150753 (ftsj3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
112150753
NCBI-ProteinID:
XP_024134990
Ensembl:
ENSOMEG00000014432
LinkDB
All DBs
Position
LG4:8361164..8369472
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AA seq
855 aa
AA seq
DB search
MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQ
VASKFMPVSSLIIGVDLVPIRPIPNVVTLQEDITTEKCKQALRKELQTWKVDVVLNDGAP
NVGANWQHDAFSQAHLTLMALKLACEFLNKGGTFVTKVFRSKDYQPLLWIFQQFFKKVQS
TKPQASRNESAEIFVVCQGFLAPDKIDSKFFDPKHAFKEVEVQAKTVRDLITVKKPKAEG
YTDGDLTLYHSFTVTSFLKAENPVDFLGKASAITFDNPNLESHPSTSSEIKECCRDIKVL
GRKELRLLLNWRTKLRRYLAKKLKEEAKQLDQEISLTSDEDDNSEDEPEEKKEDKVEEGD
DEDEEEKEMQKKLAELKAEEVAELRRKKKKLLKERRKQRERVELKMDLPGVSIANTDDTS
LFSLSSIKKKKVLSDITKGDMQAADSLAEGEDDLHFSDEEEDDEDEMSLASDLDEEDLEE
VEQREKELEKKKPKKKVKFTEEAEDEEQDEGLLVELEEKDEKKERETNLWFSKGIFSEID
LEGDAEGELMQTEWLQKRPKGKGQKRKAEQVEKDVEEENKEEAPPPDEEKPGPSREAEQE
SDSDSDDSSDDEKEISKMKKAKGGGGTSEDPDGDDFQVVPVESTSKKARILDAEGLALGC
QIATSKKKTRDLVDNSFHRYAHSEDPWEVPEWFLDDERKHRQRPVEVTKEMVEEYKQKWK
EINARPIKRVAEAKARKKRRTLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGLG
KEKREVTYVVTKKGAGKKVRRPPGVKGVFKVVDGRMKKDMRGMQRKEQHAKGGKGKGKGR
HSKGGVKGGKGRKGK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacttaaagttggaaaaactagaaaagataaattttaccatttggcaaaa
gaaacaggttatcgttcacgttcgtcatttaaactcattcagctgaaccgtaagttccag
tttctacagaaagcgagagctctggtcgacctgtgcgctgctccaggaggatggttacag
gttgcatccaagtttatgccagtttcaagtcttatcattggtgttgacctggttcctatc
agacccatcccaaatgtagtgacgctgcaggaggacatcaccactgagaagtgcaaacag
gctcttcgaaaggagcttcaaacgtggaaagtggacgttgtgttaaatgatggagcccca
aatgtgggcgccaactggcaacatgatgccttctcccaagctcatctgactctcatggcc
ttgaagttggcctgtgagtttctgaacaaagggggcacttttgtcaccaaggtgttccgg
tctaaagactatcaacccctcctctggatcttccaacagttcttcaagaaggtgcagtcc
actaagccacaggcatcgagaaacgagtccgccgagatctttgtcgtctgtcagggattt
ctagctccagacaaaatagatagtaagttctttgaccccaaacacgcctttaaagaggtt
gaggtgcaggccaaaactgtgagggatctcattacagtcaagaaaccaaaggcggaggga
tacacagatggggatttgacgctttaccacagtttcacggtgacgtctttcctaaaagcg
gaaaatccagtggactttttgggaaaagctagcgcgatcacatttgacaatccaaacctg
gagtcccatccctccaccagcagtgaaatcaaagaatgttgtcgggacatcaaagttttg
ggtcgcaaagaactccgcctcctgctgaactggaggaccaaactgaggagatacttggca
aagaagctgaaggaggaggccaagcagctcgaccaggagatcagtttaacatctgatgaa
gatgacaattctgaagatgaaccagaagaaaagaaagaagataaagtggaggaaggggac
gacgaggatgaagaggagaaggaaatgcagaagaaattggcagaactcaaagccgaagaa
gtggctgagctgagacggaagaagaagaagctgctgaaagagaggaggaagcagagggag
agagtggagctgaagatggacctgccaggcgtgtccatcgccaacacagacgacacgtct
ttgttctccctgtcctccatcaaaaagaaaaaagtgctgtctgacatcacaaagggggac
atgcaggcggccgacagtctagcagaaggagaagatgaccttcacttctcggatgaggag
gaagatgacgaagatgaaatgtctctagcatccgatttagatgaagaggacttggaagag
gtggaacagagagagaaagaactggaaaagaaaaaaccaaagaagaaagtgaagttcaca
gaggaggcagaagatgaggaacaggatgagggtttgctggtggaactagaagaaaaggat
gagaagaaagaacgagagaccaacttatggttcagcaagggtattttctctgaaatcgat
ctggaaggagatgcagaaggggagctcatgcagactgagtggcttcaaaaaagacctaaa
ggtaaaggtcagaaaaggaaagctgaacaggtggaaaaggatgtagaggaggagaataaa
gaggaagctcctcctccagatgaggaaaagccgggaccttcacgtgaagctgagcaggaa
agtgacagtgactctgacgacagcagtgacgatgagaaggagatttccaaaatgaagaaa
gccaaaggtggtggagggacgtcagaagatccggatggagacgacttccaggtcgtcccc
gtcgaaagtaccagtaagaaagcgaggatcctggatgcagaaggcctggctttgggttgt
cagatcgccacatccaagaaaaaaacaagagatttggtggacaattcattccacaggtat
gcccactccgaggacccatgggaagtccccgagtggttcctggatgatgagcgtaaacac
aggcagaggccggtggaggtcaccaaggagatggtggaggagtacaaacagaaatggaaa
gaaatcaacgcccggcccatcaaacgggtcgctgaagccaaggctcggaagaagaggagg
acgttaaagaagatggagcaggccaagaagaaagcagaggccgtcgtcaacactgtggac
atctctgaacgcgagaagatggctcagctgaagagtatctacaagaaagctggcttgggg
aaggaaaagagagaagtgacatacgttgtaaccaaaaaaggagcaggcaagaaggtgaga
agacctcctggagtcaagggagtcttcaaggtcgtggacggtcgcatgaagaaggacatg
cgaggaatgcagagaaaagaacaacacgctaaaggaggcaaagggaaaggaaaaggaaga
cattccaaaggaggggtgaagggcggtaaagggaggaaaggaaaatga
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