Oryzias melastigma (Indian medaka): 112150792
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Entry
112150792 CDS
T07439
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112150792
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
112150792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
COLFI
DUF6134
EGF_2
Motif
Other DBs
NCBI-GeneID:
112150792
NCBI-ProteinID:
XP_024135042
LinkDB
All DBs
Position
LG4:17565047..17657785
Genome browser
AA seq
1375 aa
AA seq
DB search
MHPSSRLLPLAAAGSAAAQRTRAELERSRGEKPTAAEKRRRKREDAADTHRQAGLHSAAS
RGFKMSLGSGRLIGIIALIASLLHCCCGTEGEAEVCDKPLVSSLPPLSFRSSSQLSSSHG
AAFAKVNRREGAGGWSPQFSDRHQWLEVDLGRRTQITAVATQGRYGSSDWVTAYLLLFSD
TGHNWIQHRQEDSLGAFQGNSNADFVVQYKLEQPVIARYLRLTPLDWNPTGRIGLRMEIY
GCEYTSEVVSFDGSSSLIYRLNLSPSRMSTEVISLNFKTLKNSGTLLHAKGSREHSLNLV
LEKGKLLLYHQQGVSSFSGGQLLVSLGSLLDDQHWHHVELEKLNAHLNITVDKNTQQVHL
PAELSHWYIHTLSLAGVLSHGLQKPILPNRSFHGCLENLLYSDLNLIDLARQGSPQATVV
GNVTFSCAEPVSVSVTFTDPQSFLQLPGLASWPSEELSIMLQLRTWNKAGLLLSFVLPHQ
GGSVFLYLSDARLRLQISKANKTLLELSAGSGMNDGQWHSVELTSKRDHLSITVDKDEGA
TAQTNIALPLTSNSQLFFGGCSAQDSYPECTNPFRVFQGCMRFLTLDGHPVDLIKVQQRV
LGNYSHLEIDTCGIIDRCTPSHCEHGSKCIQTWSTFHCNCSNSGYRGATCHSSPYERSCE
MYKHKGNTSGLYYIDVDGSGPIKPQTVYCNMTEDKTWVEIQHNNTEMTRVLFSSEKNQHF
AHFNYSSAEEQLAAIISQSEHCEQELSYHCRRSRLLSSIDGAPLSWWTGGPGPGRVQTYW
GGAPPDSHQCACALQGKCLDPRFSCNCDADHDQWTDDSGLITQKEHLPVRSLVLGDVQRP
GSEGAYRVGILRCHGDKNFWNAAFFDKETSYLHFPTFHGELNVDISFLFKTTTSSGVFLE
NLGIKDFIRIELASSTEVVFSFDVGNGPVEVRVKTSLPLNDDRWHTVRAERNVKEASLRV
DNNPVETRDAPADGLIHLQLNSPLFVGGTASRQRGFLGCIRSLQLNGVTLDLEERAKITP
GVRPGCPGHCSSYGALCQNRGRCVELNRGFSCDCSPSAYAGAFCHKEVSANFKSTTSVTY
IFKEPREMQKRKPAVLPPSLQSETTLTGENISMSFRTTQSPALLLYVSSFYREYLILLIN
KHDNLELWYKLHSLRDAEVLNSRVTNLADGSRHTVTVRREATKVSVQVDQNAGEDFNLTS
DMEFNSIKSLTLGRVQEFDGGDSELASLSFTGCLSSVRFNSISPLKAALLHPDGHVVITE
PLEQSSCASSSSSPPDSHAAETTQSLSDLPGSVDPGQRLVNAIRTDSALIGGVIAVGIFA
TASALAIMVRFLCSRRETYQNREVKAAQGEDCHEFPFSSQTDSPSIPSKNQEFFI
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttcctcccgactgcttccactcgctgctgcaggctctgctgcagcgcagcgc
accagagcggagctggagaggagcagaggagagaagccaacagcagcggagaagaggagg
aggaagagggaggacgcagcagatacccaccgacaggcgggactacactctgcagcatcc
cgtggcttcaaaatgtctctggggagtgggagactcattgggattattgcgctcattgcc
tcgctcctgcattgctgctgtgggacagaaggagaagcagaagtttgtgacaagccgctg
gtgtccagtctgccaccattgtccttcagaagctcctctcagctgtccagcagccatgga
gcagcttttgcaaaagtcaacagaagagaaggagcaggaggatggtctccacagttctca
gacagacaccagtggttggaggtggatctggggaggaggacgcaaatcacagctgttgcc
acgcagggtcgctacggcagctctgattgggtgacggcttacctgttgttgttcagtgac
acaggacacaactggattcagcacagacaggaagacagcttaggggctttccaaggtaac
agtaatgcggactttgttgtccagtataagctggagcagccggtcattgctcgttatctt
cgtttgacaccactggattggaacccaactggaagaattggactcagaatggaaatatat
ggctgtgaatacacttctgaagtggtaagctttgatgggagcagcagcctcatctataga
ctgaatctcagcccaagtaggatgtcaacggaggtcatctctctgaactttaaaaccctg
aagaattctgggactttgctccatgcaaaaggatccagagaacacagcctgaatctggtg
ctggagaaaggaaagctgcttctctatcaccaacaaggcgtaagctcattctctggtgga
cagctccttgtttctctgggtagtctccttgatgaccagcactggcaccatgtcgagctg
gagaagctcaatgctcacctcaacatcacagtggataaaaacacacagcaggttcaccta
ccagccgagctgagccactggtacattcacacgctgagtctggcaggcgtcctgagccac
ggactgcagaaaccaatccttcccaacaggagcttccacggctgcctggaaaacctgctg
tacagtgatctcaacctgatagacctggccagacagggcagcccacaggccactgtggtg
gggaacgtcaccttctcttgcgctgaaccagtttcagtttctgtgacgttcactgacccg
caaagcttcctccagctgccaggactggcatcctggccttcagaagagctttctataatg
ctacagctcaggacgtggaacaaggctggactgttgctgagttttgttctacctcatcaa
ggaggctcggtcttcctttaccttagtgatgccagacttcgccttcaaatttctaaagcc
aacaagacactgctggagctcagtgcaggctcaggaatgaacgacggtcagtggcactcg
gtggagctgacctccaaacgagaccatctgagcatcactgtcgacaaagacgaaggagct
acagctcaaaccaacatcgcacttcctctgacctccaacagtcagctcttctttggagga
tgttctgctcaggacagctacccagaatgcaccaaccccttcagagtctttcaggggtgc
atgcggtttctgactctggacggccatcctgttgacctgattaaagtgcagcagagagtg
ctgggaaactacagccatctggagatagacacatgtggaatcattgacaggtgtaccccc
agccattgtgaacatggaagcaaatgcatccagacttggagcaccttccactgcaactgc
tccaacagcggctacagaggagccacctgccacagctcaccgtatgaacgatcttgtgag
atgtacaaacataaaggaaacacttcaggactctactacattgacgtggacggcagtgga
ccaatcaaaccccagactgtttactgtaacatgacagaggacaagacgtgggtggagatc
cagcacaataacacagagatgaccagagttctgttttcctctgagaaaaaccaacacttt
gctcacttcaactactcctctgcagaagagcagctggcagccatcatcagtcagtcagag
cactgtgagcaggaattatcctaccactgcaggaggtctcgtctgctcagctccatcgac
ggtgctcctttgagctggtggacgggaggtccaggtccaggtcgggtccagacatactgg
ggaggagctccgcctgacagccatcagtgtgcatgtgctctgcagggaaagtgtctggat
ccaagattctcctgcaactgtgatgccgaccacgaccaatggactgatgactcaggcctc
atcacccagaaagagcacctcccagtcaggtcactggtgctgggtgacgttcagcggccg
gggtcagagggtgcctacagggtgggaatccttcgttgtcacggagacaaaaatttctgg
aatgctgcattttttgacaaggagacttcatatcttcattttccaacttttcacggagag
ctgaatgttgatatttcctttctttttaaaaccacaacctcatctggggtctttctggaa
aatctgggcatcaaggacttcatacgaattgaacttgcatcttctacggaggtcgtcttc
tctttcgatgtggggaatggacccgtggaggtgcgggtaaagacgagtctcccgctgaac
gacgaccgatggcacactgttcgggctgagcgaaatgtgaaggaggcatcgctgcgtgtc
gacaataaccccgtagagacacgggatgctcctgctgacggactcatccatctgcagcta
aacagccccctgtttgtagggggcactgcatccagacaaagaggcttcctgggctgcatt
cgctctctgcagttgaacggtgtcaccctggacctggaggagagggcaaagatcacccct
ggagtccggcccggttgccccggccactgcagcagctatggcgcgctctgccagaaccgg
ggtcggtgtgtggaactcaaccgagggttctcctgtgactgcagcccgtcggcctacgca
ggagctttctgtcacaaagaggtttctgccaactttaagtcgacgacatccgtcacctac
atcttcaaggagccccgtgagatgcagaagagaaaacctgccgtcctgcccccgtccctg
cagtcggagaccacgctgacgggagaaaacatctccatgagcttcaggaccactcagagt
cctgctctgctgctctacgtcagctctttctacagagagtatctgatactcctcatcaat
aaacatgataatctggagctgtggtacaagctgcacagcctcagagatgcagaggtgttg
aacagcagagtcactaacttggctgatgggagtcggcacaccgtgaccgtcaggcgggag
gcgaccaaggtgtctgtgcaggttgaccaaaacgccggagaggacttcaacttgacatct
gacatggaattcaacagcatcaaatcactcactctgggcagggtgcaggagtttgatgga
ggggattcagagctggcctctctcagcttcacgggctgtctatcaagtgttcgatttaac
tccatcagtcccctcaaagctgctctgctccatcctgacggccatgttgttatcactgaa
ccattggaacaatcgagttgtgcctcctcctcctcctctccgcctgattcccatgcagca
gaaacaacacagtctttatcagaccttcctggctcagtggacccaggtcagcgtttggtc
aacgccatcaggacggattcagctctgattggaggtgtgattgcagtgggtattttcgca
actgcgtctgctttggcgatcatggtgagatttctctgcagcagaagagaaacgtaccag
aaccgagaggtaaaggcagcacagggggaagactgccacgagttcccgttcagcagtcaa
acagactctccaagcattcccagcaaaaaccaggagttttttatttag
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