Oryzias melastigma (Indian medaka): 112150807
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Entry
112150807 CDS
T07439
Name
(RefSeq) low-density lipoprotein receptor
KO
K20052
low-density lipoprotein receptor-related protein 8
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112150807
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112150807
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
112150807
NCBI-ProteinID:
XP_024135069
LinkDB
All DBs
Position
LG4:12724347..12739537
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AA seq
664 aa
AA seq
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MGHLGCLALLIFIFQISGAAGHSVLNCHKQQDFTCTDGSCISKLKVCDGHMDCTDGSDEL
HCSEEWCNKDEFTCRSRRCISTELLCNAVDDCGDGSDEDSCQNCTSGVFSCGPSDACLPK
DKVCDGRADCTSKRDESLELCGSDQPVAQTAPTCAPSEFRCGDGECIRHVWRCDNTPDCS
DGSDEEDCNQNECLVNNGGCSHRCVDLPMGFLCQCPDHMKLVDDSRCEEVDVCLERDVCD
QLCVYSSRSITCDCHEGYRPGSTTGECTAEGDEAQLVFTTSKGVQLMSLFGADHETLAPH
LPGRGPVAAVTSNRTLYWAKQGQNFIYRISVDKEPQEATLVQKVQGSVSGLAVDWIHRLL
YWTSPDQGSVNVALMDGSSEHPLITGLDEPSAVAVDPLQGFVFWTQCGSVPKIERAGLDG
RRRTALVTSSLNQPGAITLDIPRQLLYWFDQRTRSISRVTYEGRHRKTVVESNGYLDRVF
GLAVFEGFLYWSDEVTRSICRANKHDGKNLQVLLSDIPSAGGVAIIQPALQPNGPAMCGR
PGTACPHTCLVDLQPERLRFSCVSPETRSNKPQTPEISNIVPAATFSVLTFAGILSLIIF
LSVLLLGGVLWWWRRLRLQPSRTSSALSFSLKDSQDPLISQESHSRTRTFLIEDLLLKVD
LDSD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggggcaccttggatgtttggctctcctgatcttcatctttcagatatctggtgctgca
ggtcattctgtgctgaactgccacaagcagcaggactttacatgcacggatggatcctgc
atctccaagctgaaagtgtgtgatggacacatggactgcacggatggttcggatgaactt
cactgtagtgaggagtggtgcaacaaagatgaatttacctgccgcagcagacgctgcata
tcgacggagcttttatgcaacgccgttgatgactgcggtgatgggagcgacgaggattcc
tgtcagaactgcacctctggggtcttctcctgtggcccgtctgacgcctgcctgcccaaa
gacaaagtgtgcgacggacgggccgactgcacaagcaaacgggacgagagcctggagctg
tgcggctcggaccagcccgtcgcccagaccgcaccgacgtgcgcgccgtcagagtttcgg
tgtggagacggagagtgcatccgccacgtgtggaggtgtgacaacacacccgactgctct
gatggcagcgatgaggaagactgcaatcagaacgagtgtctggtcaataatggcggctgc
tctcatcgctgtgtggacctccccatgggtttcctctgccaatgccccgaccacatgaag
ctggtagacgacagccgctgtgaggaggttgacgtgtgcctggagagagacgtgtgtgat
cagctgtgcgtttacagcagccgcagcatcacctgtgactgtcacgagggttaccgtccg
ggttcaaccacaggagagtgcacagctgaaggagatgaagcccagctggtcttcaccact
tctaaaggagtacagttgatgagcctgtttggtgcagatcatgagacgctggccccgcat
ttaccagggcggggtccagtggcagccgtgacatccaaccgcacactgtactgggccaag
caaggacaaaactttatttacaggatctccgtggataaagaacctcaagaagccacgctg
gtgcaaaaggttcaaggttcagtgtcgggcctagctgtggactggatccaccgacttctc
tactggaccagtccagaccagggttctgttaacgtggccctcatggacggttcctcagaa
cacccacttatcacaggactggatgagccctctgctgtggctgtggatcctcttcaaggg
tttgttttctggactcagtgcggcagcgtcccgaagatcgagagggccggcttggacggc
cgcaggaggacggctctggtcacatcctccttaaaccagcctggtgccatcactctggac
ataccacggcagctcctttactggtttgaccaaagaaccaggagcatctccagggttacc
tatgaagggcgccaccgtaaaacagtggtagaatctaacggttacctggaccgcgtgttt
ggactcgctgtttttgaggggtttttatattggagtgatgaagtgacgcgctcaatttgc
cgcgcaaacaagcacgatggcaaaaacctccaggtgctgctgtctgacatcccctcagct
ggaggagtggccatcattcagcctgcgctccaacccaacggcccagctatgtgcggacgt
cccgggacggcgtgccctcacacctgcctcgtcgacctgcagcctgaaagattacgcttc
agctgtgtttccccagagacgaggagcaataaaccccagactcctgagatctccaacatc
gttcctgcagcaactttttctgttctcaccttcgctggaatcctgtcactgatcatcttt
ctcagcgtgttgctgctgggaggggttctgtggtggtggaggaggctgaggctgcagccg
tccaggacttcctctgcgctgagcttctccctgaaggattcccaggacccgctcatcagt
caggagtcgcactcgcgtacgaggaccttcttgatcgaggacttgctgcttaaggtagat
ctggacagtgattga
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