Oryzias melastigma (Indian medaka): 112150825
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Entry
112150825 CDS
T07439
Symbol
cltrn
Name
(RefSeq) collectrin
KO
K20004
collectrin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112150825 (cltrn)
Membrane trafficking [BR:
oml04131
]
SNARE
SNARE associated proteins
Others
112150825 (cltrn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collectrin
PFF1_TM
ECF_trnsprt
FAM176
DUF6724
DUF3169
EphA2_TM
Wzy_C
Gram_pos_anchor
DUF6732
FeS_assembly_P
DUF4381
Motif
Other DBs
NCBI-GeneID:
112150825
NCBI-ProteinID:
XP_024135094
Ensembl:
ENSOMEG00000005371
UniProt:
A0A3B3BFR3
LinkDB
All DBs
Position
LG4:complement(796404..802066)
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AA seq
219 aa
AA seq
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MLERVFLLLCFLPVLAAETCKPNTPNGHKVRLSIKTALGAEAYDWNENERFLFQSTMAYA
MRNLKGENFTVSNIVVCDETPRVSFWFVVTSPNDPSKVVSKGEVEEAVRKSRNRINQAFM
LSDSTLEFIGILPTLAAPVEPPTPTWLIVFGVVMGMVLAGIVILLALSFVQKKRKKNKKA
DVEEEEDDEGTQVQTAENGATRVDYYNNSFADDERFTHM
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgttggagagggtcttcctcctgctgtgttttctgcctgttctggcagcagagacctgc
aaaccaaatactccaaatggccacaaagtccggctcagcatcaaaacggctttgggagct
gaagcctatgactggaatgaaaacgagcggttccttttccaatctaccatggcttatgcc
atgaggaacttgaagggagagaactttacagtgtccaacattgtggtatgtgacgagact
ccaagggtgtccttctggttcgtggtaacgtctcccaatgacccttcaaaagtggtttcc
aaaggagaggtggaagaggctgtcagaaagtccagaaatcgcatcaaccaagccttcatg
ctgtcagactccaccctggagttcatcggcatcctccccacgctggcggcgccggttgaa
ccccccacacccacatggctgatcgtgttcggggtggtgatgggtatggttctggcgggc
atcgtcattctgctggcgctttctttcgtccagaagaaacgaaagaagaacaaaaaggca
gatgtggaggaggaggaggatgatgaagggacacaagtgcaaacggctgaaaacggcgcc
acgagagtggattattataataattcctttgcagacgatgaacggttcactcacatgtag
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