Oryzias melastigma (Indian medaka): 112150873
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Entry
112150873 CDS
T07439
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112150873 (ccdc50)
Membrane trafficking [BR:
oml04131
]
Autophagy
Other autophagy associated proteins
Others
112150873 (ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
112150873
NCBI-ProteinID:
XP_024135158
Ensembl:
ENSOMEG00000013780
UniProt:
A0A3B3DIC8
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Position
LG4:complement(8048227..8068856)
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AA seq
610 aa
AA seq
DB search
MAECDVSIDQKKLPGVKEVCRDFAVLEDHSLAYNLQEQEIESHLASNVHKNRLVQKDLIV
AKKLQEEEDEIAKIKSQKQHGDIERQDNEIAQEIQEELIRQAELQRLQEEKDAAIARKLQ
EKEMKEERRRKKQQESNVEEDYFEDHGAGRTLDVDKCIRQKSRSPDPYGAHSSVRSGRDF
SPEYYSTEPKRSRYPRQDSAAPQTQLKNMEYYSMTEGGRSRHADTYPEHLLPSRSRHGDR
NPVYEHAHTQRAKTYGGAESDGAVRKKEKPERPPPPQNLVERDKTVDRERNRHEMEREAG
RDTRRGREQHLKPQREKSTDGGHSGDRQAERDRRRPKQQGRGGSRERGLEEDFLETGHSK
DWLMESSASWEDGEERRDKNRPRVYSIPNEPHDKLRNDEGQGDSRESWESGHGGGRGRER
SYSTPTKETGRPGHRGGGAVIGESAEFGLSEATQGLTKLDLREQELRDMEVAKKLQEEEL
KANSMHVRAAQVAQDEEIARILMEQEKKEYRKIREREKEKAQERERMAMERRRQEGEHRP
KSEDVVRPRTREDYDYQRQKNHSKPARPPQPRIHDYENVGPGGYGYPDHPVNARPHTRPE
AAYKGAYQKR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgtgacgttagcatcgaccagaaaaaactacctggagtgaaagaggtgtgt
cgtgattttgctgtgctggaagaccactctctggcctacaaccttcaagaacaagaaatc
gagagccacttggcctccaacgtccacaagaaccgcctggtgcagaaggacctgatcgtt
gccaagaagctccaagaggaggaggatgagatagccaagatcaagagccagaagcaacat
ggagacattgagcggcaggataacgagatcgcgcaggagatccaggaggagctgatccga
caagcagagcttcagcggctgcaggaggagaaggatgcggccatcgctcgtaagttgcag
gagaaggaaatgaaggaggaaaggaggagaaagaagcagcaggagtccaacgtggaggag
gactactttgaggatcatggagctggaagaactcttgatgtggacaaatgtatccgccag
aaatcaaggtcacctgacccgtatggcgcacattctagcgtgcgctcagggcgggatttc
tccccagaatattattccacagaaccaaaaaggagcaggtacccaagacaggactcagct
gcaccccaaacccagctcaaaaacatggagtactactcgatgacagagggaggacgcagc
cggcatgcagacacgtatccagagcacctgcttccctccagatccaggcatggagacagg
aacccagtctatgagcacgcacacactcagagagcaaagacctatgggggggcagagtcg
gatggagcggttaggaaaaaggaaaaaccagaaagacctcctccacctcagaacctcgta
gaaagagacaagaccgtagacagagagagaaaccgacatgagatggaaagggaagcagga
agagacaccaggagaggaagggagcagcacctgaaaccacagagagaaaaatccacagat
gggggccacagtggagacagacaggcagagagagaccggcgcagaccaaaacagcaagga
cgaggcgggagcagagaaagggggctcgaggaggacttcttagagactggacacagcaaa
gactggctgatggagagcagtgcatcctgggaagacggtgaggaaaggcgggacaagaac
cggccgcgggtgtactccatccccaacgagcctcatgacaaactcaggaacgatgaaggc
caaggagactcacgggagagctgggaatctggacatggggggggtcgtggaagggagcgc
agttacagcacccccaccaaagagacaggtcgtcccgggcacagaggaggcggcgcagtc
atcggggaaagtgccgagtttggactgagcgaggcgactcaggggctgaccaaactggac
ctccgtgaacaagaactacgggacatggaggtggcgaaaaagctgcaggaggaagaactg
aaggccaacagtatgcatgtgcgtgcagcccaagtggcccaagatgaggaaatcgctaga
atcctgatggaacaagagaagaaggagtacagaaagattcgagaacgggaaaaggaaaag
gcgcaggagagggagaggatggccatggagaggagacgacaggagggagaacacagacca
aagtctgaggacgtcgtgcgacccagaacgcgagaagactacgactaccagaggcagaaa
aatcacagcaaacccgccaggcctcctcaacctcgtatccatgactacgagaacgtgggc
cctggtgggtacggctacccggaccatcccgtcaatgctcgccctcacacacggcccgag
gctgcgtacaaaggagcctatcaaaagcggtga
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