KEGG   Oryzias melastigma (Indian medaka): 112150880
Entry
112150880         CDS       T07439                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03013  Nucleocytoplasmic transport
oml03015  mRNA surveillance pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112150880 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    112150880 (ncbp2)
   03015 mRNA surveillance pathway
    112150880 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112150880 (ncbp2)
   03041 Spliceosome [BR:oml03041]
    112150880 (ncbp2)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     112150880 (ncbp2)
Spliceosome [BR:oml03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    112150880 (ncbp2)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 112150880
NCBI-ProteinID: XP_024135169
Ensembl: ENSOMEG00000010498
LinkDB
Position
LG4:17547807..17549987
AA seq 164 aa
MSAKLNALNSDSYTEVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFA
KCGDVKRIIIGLDKIKKTACGFCFVEYYTRGDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQQRSTEARNTF
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgctaaattaaacgcgttaaacagcgattcttacaccgaagttagtcagtataga
gaccaacattttaaggggaatcgttatgaacaggagaagctgctgaagcagagcaacact
ttatatgtggggaatctctccttctacacgactgaggagcaggttcatgagttgtttgcc
aaatgcggagatgttaagaggatcatcatcggccttgataaaatcaagaaaacggcctgt
ggcttctgctttgtagaatattacactcgaggagatgcagaaaacgccatgcgctttgtt
aacggcacacgactggacgatcgcatcatcaggacagactgggatgctggcttcaaagag
ggccggcagtacgggcgaggaaaatctggaggacaggtgagagatgagtacaggcaggac
tatgatccagccagaggaggatacgggaagctggctcagcaacagcgaagcacagaagct
cgcaatactttttag

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