Oryzias melastigma (Indian medaka): 112150982
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Entry
112150982 CDS
T07439
Name
(RefSeq) oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112150982
04812 Cytoskeleton proteins [BR:
oml04812
]
112150982
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112150982
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
112150982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
112150982
NCBI-ProteinID:
XP_036073416
Ensembl:
ENSOMEG00000002024
LinkDB
All DBs
Position
LG20:complement(6010622..6020806)
Genome browser
AA seq
2344 aa
AA seq
DB search
MNETGLRKSLPDHSSGSGHTIDTPRQPSVVDPIISKRVCFYKSGDPQFNGLRIVINSRTF
KTFDALLDSLSKKVPLPFGVRNITTPRGVHGIHTLEDLEDGKSYICSDSRKVKPINLALA
RKKLPPWYHARPVSSRRQTVQQARLFPGRGISRQEAIAVRTPKKLVVFRNGEPSVRHTVI
LHKKTTLSYESILDYISELMQFHVVKLYTPDGRRVDGLLGLILCSGTVVAVGREPFRPAV
YSEKKIPPPRRPNNRTGPRRQKTLNRKNKSLSSSLKSRNFSTSSKRYIVHQIHNSIAESS
CCPASDPAKSVELESNRILESVAETEGNSSLADEAERQDSLVPSDDNIEKSFRVNQDGSM
TVEMKVRLTIKEEETIHWTTTLKRSNVDQLQEPDLCPDKANSLGLPSGADSTDTFNKDES
TDTENQPLLSNGAFSREEDDMNHTDIVSSWRAPTPGHIKVSKQHTSVESITSVTADGIQE
ETAGAYSYRERTENGRVMQQYCMVKESSTRPVPKPRRRGSIEVNSRNFSEIKASERTGIL
QTESSEEEITETVLHICEQQACQDNYLSNFCTPAAGFFLNKPPTQENRQLSSNNDFELLR
PRTDSEKQLVTSRSHFTQVKMQDAKKIQFHKSSREKGRQKEVSKGTKVSSKSAMIKKPLL
TRAKKQKQNSSEAHKSRKKAKTFSSAGFLKRIYGNKMKSAKNMKKMKKRKQDGEKDFTRE
SDSTIRTVGRESNIPLVVKGKISAKVSFETNSVPVSEVTKPRLQRQTSMHMEKSSKKESH
DVNESNILSAFNSHSSVTGQYVESWLEKSYPSPPSNPTQESSRNKNGGECEKSKKIVDFI
NVATQERTLEIKTCEPSLQSMTATPVQLKGQTFENKSNSLMTHQLANGICSEIGPRRTET
LTETTEGDMDEDAIPSYMLSMELPPPPPEFLNPDESSAASSPLYRLSSTSSQTSDPFQPS
MTVMSPTDNTTASQKETHKTSVKRAPLVSNVSLERKMSLRKARVDEYSLDNHATAETTLL
PAPLNNEILSLGTGKEESIACIPSVCTSLSPTSSASYEGRSASVSLSEASVSQSVPEQCT
KRTKTPHKGATSPKTLEKKPKLKSSPSPERKPQHKKSVQVQNDSPKLPPVHIRSLNKTVL
PNISTDKRATRNGSPSPERKPYRTKPTSSVHSQSLEVVSPPVKHKTNKKSLQRNLSLDNP
ADPKSNTQDKTSPPNENNQASQSGETMFSTEINTQTIQQSLNTPKQPNMKPVLEKLCYSI
KSIRQITQNKRPSCLEKSNSLPDFSSHVASTFGSSSKALLAFLSVMTLKEGLTSLNVNEL
NANNVSCAEALRMIDSLREIASIEDSHRLKSSLSVLQQSASQELLKSWKGFQELESKSRS
STPAEQEFVNTTGPESDCVVDEIMGNLDIPTKLKEELASLSDGVRTDNEEEISASGRKEN
STGVLVQEAVSQCDEASINVKSIIKKFSDAPKPKQEIIESAKPRPNGQKITKDGQNRLDS
VTVIEPSPPKLPEHRQLCSLSPTDLEPGRGVRHQDDTKQMMEGKDEKLPRIIKEGINLTQ
SFTTEEEDVEKRQLKMHREQASTENRIPQNDQSGSDETGQEMLCANKDLNQKESSGEVGA
RQVMKQESSEGEDLSKPETGKQLSSNSFSIRSKKSTDSGSDSESQASESQQHVRAGCMGL
SISTDESTGTSEGDDSSSEEDQPASDFKKLQVIVEESFSGNEEEEEEYLSEPPKVQPKKS
RELEALIEEVEEDQASSGEEDPITSQPKSQNTLKEYRNLYIIEDEGSLNISDRVGKGFEF
KKDDDSGNDHSSCEELGEEEPHKAEDQQNSSSAEEDISYFEKDNSLEEEQTTINIRVEES
CVEPSGVEAEDQQNSSSAEEDISYFEKDNSLEEEQTTINIRVEESCVEPSGVEVKTDDIK
LSEMFKPNPEETKTQTVAERVILLEKQVAEAQKAMTTPSCTIRRFSQRKGHLDSDDEGSP
PELVLCTRSAPQSSLSFSYDSSGVVTTEPEGSRVRSIREMFLARSSADIHQRRFQSPNSS
ELSELRAETSCSGGYQSQTTSDASSGEDDTARKSITKGFVRRTIERLYGNKEPSAEEPSE
TPPSVPNQKKKEPSSIFSPLHAARSKAMSELSYFSSTRALDAFSEATRCIAFNAQVAPGD
SFPIDYNQWLIKDNTMIRKSASDPVGINKSFKNTTQEERPQKDTEENTPYSLFSSEPEIE
DKTKSQSTKCTYFSLPHASDSEICQDDLSTASKSSVTGDSVTEAKDASEEPKTWTERNGM
LPGVSITDFKMMDNKVHPLLEHPPEGEVVVVQPRKGQGIVNRRLQEPDVLDLLYNFCGEH
CPLL
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacggggctacgaaaatctctccccgaccactcttcagggagtgggcacacc
atcgacaccccccgccaaccgagcgtcgtcgaccccatcatatccaaacgggtctgtttc
tacaaaagtggagatcctcagttcaatggcctgcgcatcgtcatcaacagccgcaccttc
aaaaccttcgacgctcttctggacagcctgtccaaaaaggttccgctgccgttcggggtg
agaaacatcaccacccctcggggagttcatggcatccacactttggaggacctcgaagac
gggaagtcatacatctgctcagatagccgcaaagtgaagcccatcaacctggcgctggct
cgtaaaaaactgccgccttggtaccatgctagacccgttagctctcgtcgccagactgtg
cagcaggcaaggcttttcccaggccggggcatcagcaggcaggaggccatagctgtgcga
acccccaagaagctcgtggtctttcggaacggagaaccctctgtcagacacaccgtgatt
ctccacaaaaagacgacactcagctacgagtctatcctggactacatctcggagctgatg
cagttccacgtggtcaaactgtacactccggatggaagacgggttgatggtcttctgggt
ttgatcctgtgctctggaactgtggtggctgtaggaagggagcctttcaggccggctgtg
tacagcgaaaaaaaaattcctcctccaagaaggccgaacaacagaacaggccccagaaga
caaaagactctaaatcggaaaaacaagtcgctatcgtcctctctgaaatcaagaaacttc
tcaacatcctccaagaggtacatcgttcatcagatccacaacagcatcgcagagagctca
tgctgtccggccagtgacccggccaaatccgtggagttggagtcgaaccgcatcctggag
tcggtagcagagacggagggtaattcctctctcgcagatgaagctgaaagacaggacagc
ttggtgcccagcgatgacaacatcgagaagtcctttcgggtgaaccaggatggtagcatg
acggtggagatgaaggtgaggctgacaattaaagaagaggaaaccattcactggacgact
accctgaagcgctcaaatgttgatcaacttcaggagccggacctctgccctgacaaagca
aattcactgggtttaccaagtggtgctgacagcaccgacaccttcaacaaagacgaatct
acagatactgaaaaccaaccactgctgagcaacggagctttcagcagagaagaggatgac
atgaaccacacagacatagtttcctcatggagagcaccgactccaggacacataaaagta
agcaaacaacacacgtctgtggaaagcatcacatctgtaacagcagatgggattcaagaa
gaaacggcaggtgcttattcctacagagagaggacagaaaatggaagagttatgcagcag
tactgcatggtgaaagagagcagcacgcgaccggtgcccaaaccaaggaggcgtggctcc
atcgaggtcaacagcaggaatttctctgaaatcaaagcatctgaaaggacgggaattctg
caaaccgaatccagcgaagaggagattaccgaaactgtccttcacatttgtgaacagcag
gcctgtcaagacaattatctttcaaacttttgcacgcctgcagctggatttttcctcaac
aaaccaccaacccaagaaaacaggcagctctcctcaaataatgactttgaacttctaagg
cccagaacagactctgagaagcagttagtcacatcaaggtcccatttcacacaagtgaag
atgcaagatgctaaaaaaatacaatttcacaagtcctcaagggaaaagggtcgacaaaaa
gaggttagtaaaggcacaaaggtttcctcaaaatctgctatgattaaaaaaccccttctc
actcgagcaaagaagcaaaaacaaaattcttcagaagctcacaagtcacgaaaaaaagca
aaaaccttctccagcgccggcttccttaaacgaatttacggaaacaaaatgaagtctgca
aaaaatatgaaaaaaatgaaaaagaggaaacaggacggagaaaaagattttacaagagaa
tctgatagcactataagaactgttggtagagagtcaaatataccgttagtggttaaagga
aaaatcagtgcaaaagtttcttttgaaaccaacagtgttccagtttctgaggttaccaaa
ccaagactgcagcgccagacgtcaatgcatatggagaaaagcagcaaaaaggagtcacat
gacgtcaatgaaagcaatattttatcagcttttaactcccacagttctgttactggacag
tatgtagagagctggcttgaaaaatcttatccaagtcccccgtcaaacccaactcaggag
agtagcagaaacaaaaatggtggcgagtgtgagaaatctaaaaagattgtcgattttatt
aatgtcgcaacacaagagagaacgctagaaataaagacgtgtgaaccctcgctgcaaagt
atgacggcaacacctgtccaactgaaaggtcagacttttgaaaataaatctaattcttta
atgacacaccaacttgcaaatggtatctgctctgaaatcggtccacgaagaaccgagacc
ttaacggaaacaacagagggtgacatggacgaagatgcaattccttcctatatgctctcc
atggaacttcctcctccgccacctgaatttctaaatccagacgagtcttcagcagccagt
agccctttatacaggctttcatccacaagtagtcaaacgtcagatccttttcaaccatct
atgactgtaatgtccccaactgacaacacaacagcgtctcaaaaggagacacacaaaacc
tctgtgaaaagggctcctttggtcagtaatgtgtctcttgagaggaaaatgtctctaagg
aaagcacgcgtggatgaatattcactagataatcatgccacagcagagacaaccctgcta
ccagctcctttgaacaatgagatcttatctctaggaacaggtaaagaggaatcaattgcc
tgcattccctcagtttgtacttctttgtccccaaccagttcagcatcctatgagggaagg
tcagccagtgtttcactaagtgaagcttcagtgtctcagagtgttccggagcaatgtacc
aaaaggactaaaacgcctcataaaggggcaacatcacctaaaactttggagaaaaaaccc
aaactgaaaagcagcccatcgccagagaggaaacctcaacataagaagtctgttcaggtt
cagaacgactctccgaaactaccaccagttcacatccgctctctgaataaaaccgttcta
ccaaatatcagtacagataaacgtgcaacgcgtaacggcagcccctcccctgaaagaaag
ccttatagaacaaaaccaacatcctcagtacactctcagtctctggaggtggtgtcccca
cctgtcaaacacaaaacaaacaagaagtcgcttcaaagaaacctctctttggacaatcca
gcagatccaaaaagcaatactcaagataaaacgtcacctccaaatgaaaacaatcaggcc
tcacagtcaggtgaaaccatgttttcaacagagataaacacgcaaacgattcagcagtca
ctaaataccccaaaacaaccaaacatgaaacccgttcttgagaaattatgctactcaatt
aagtcaattaggcagatcactcaaaacaagcggccatcatgtctggaaaaatcaaacagt
ttgccagacttctcctctcacgtagcatcaacctttggctcgtcctctaaagctctcctg
gcgttcctgtccgtcatgaccctgaaggaaggcttaaccagcctaaatgttaatgagctg
aatgcaaacaatgtcagctgtgcagaagcactgaggatgatcgattccctcagggaaatc
gcaagcattgaagattcccaccgactgaaaagcagcttgtctgttttgcagcagtctgct
tcacaagagctcctgaaaagctggaagggctttcaggaacttgaaagcaaaagtcgcagc
tcgacacccgcagagcaagagtttgtaaacacaactggccctgaaagtgactgtgttgtt
gatgagatcatgggcaacctggacattcctacaaagctcaaggaagagttggcttctctt
tcagacggagtacgaacagacaatgaagaggaaataagcgccagtgggagaaaagaaaac
tccacaggtgttctcgtacaggaagcggtgtctcaatgtgacgaagcttctatcaatgtg
aagtccatcatcaaaaaattctcagatgctcccaagccaaaacaagagattatagagtca
gcaaaaccaagaccaaatggacagaaaatcaccaaggacggtcaaaaccgtcttgattct
gtgacagtaattgaaccaagtccccccaaactaccagaacataggcagctatgcagtttg
tcaccaactgatttggaaccaggtagaggtgtaaggcatcaagatgatacgaaacagatg
atggaaggcaaagatgagaaattaccaagaataatcaaagagggcatcaacctgacacaa
agttttacaacagaggaggaagacgtagaaaaaaggcagctaaagatgcaccgtgaacag
gccagcactgaaaatagaattccccaaaatgaccaatcgggttcagatgagacaggacag
gagatgctatgtgccaataaagatttaaaccaaaaagagagctcaggagaagttggtgca
cgtcaggtgatgaagcaagagagtagtgagggtgaagacttgtcaaaacctgagactgga
aaacagctgagttccaattccttcagtattagaagtaagaaaagtacagatagtggttcc
gatagtgaaagtcaggcttcagagagccaacagcacgttcgtgctggctgtatgggtctc
agcataagcactgacgagagcacagggacctcagagggagatgattcctcttcagaggaa
gaccaaccggcatccgacttcaagaaactgcaggtcatagttgaggaaagtttttcaggt
aatgaggaagaggaggaggagtacttaagcgagcctcccaaggtgcaaccaaagaaaagt
agggagttagaagctttgattgaagaggtggaggaagatcaggcaagctctggagaagaa
gatccaataactagccagccaaaaagtcaaaacactctgaaagaatatcgcaacttatac
atcatagaagatgagggcagtttgaatatatctgacagagtaggaaaagggtttgaattt
aaaaaagatgacgacagtgggaatgaccacagcagctgtgaagaacttggagaagaagag
ccacacaaggccgaagaccagcagaacagtagctcagctgaagaagatataagttatttt
gagaaagacaacagcttggaggaggaacaaaccactattaatatccgtgtagaagaaagt
tgtgtagaaccttctggagtggaagccgaagaccagcagaacagtagctcagctgaagaa
gatataagttattttgagaaagacaacagcctggaggaggaacaaaccactattaatatc
cgtgtagaagaaagttgtgtagaaccttctggagtggaagtaaaaacagacgacatcaag
ctttctgaaatgtttaaaccaaatcctgaagaaaccaaaacccaaacagttgctgagaga
gtgattcttctagaaaagcaggttgcagaagcacagaaagcaatgacaactccaagttgc
accattagacgtttctcgcagagaaaaggccatctcgactcagatgatgaaggctctcct
cctgagttggttctgtgcacccgctcggctcctcaatcgtcgctgtctttcagctacgac
tccagtggagtcgtaaccactgagcctgaaggaagccgggtccgctccatcagggagatg
ttcctcgcaaggagctccgcggacatccatcagagacgcttccagagcccaaactcatct
gaactgtccgagctgagagcagagacatcatgcagtggtggctaccagtcccagaccacc
agtgatgcgtccagcggtgaggacgacacggcgcggaaatccatcaccaaaggcttcgtg
aggagaaccattgaaagactttatggaaataaagaacccagcgcagaggaaccaagcgag
actcccccatctgtgccgaaccagaagaagaaggaaccgtcgagcatcttctcacctctt
cacgctgctcgttccaaagcaatgtctgagctctcctacttcagttccacaagagcgcta
gacgccttcagcgaggccacgagatgcatcgcttttaacgcacaagtggcgcccggagac
agctttcccatcgattacaaccagtggctcatcaaagacaacacaatgattagaaagtcc
gcctcagatcccgttggaatcaacaaatcctttaagaacacgacccaagaagaaaggccg
caaaaagacacagaggagaacacgccatattctcttttttcctctgaaccagaaatagaa
gacaaaacaaagtcacaatcgacaaagtgcacctatttctccttgccccatgccagcgac
tcagagatttgtcaggatgacctgagcacggcgagtaagagcagcgtgacaggggacagt
gtcacagaagcgaaggatgcctcagaagaacccaaaacatggacagagaggaacggcatg
ctgcccggtgtcagcatcacagactttaagatgatggataacaaagtgcacccgctccta
gagcacccgcctgaaggtgaggtcgtggtcgtgcagccaaggaaaggtcaagggatcgtt
aacagaaggcttcaggaacccgatgtgttggacttactgtataacttttgtggcgagcat
tgccctttattgtga
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integrated database retrieval system