Oryzias melastigma (Indian medaka): 112150994
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Entry
112150994 CDS
T07439
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112150994 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112150994 (drosha)
03009 Ribosome biogenesis [BR:
oml03009
]
112150994 (drosha)
03036 Chromosome and associated proteins [BR:
oml03036
]
112150994 (drosha)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
112150994 (drosha)
Messenger RNA biogenesis [BR:
oml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112150994 (drosha)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
RNase
112150994 (drosha)
Prokaryotic type
rRNA processing factors
112150994 (drosha)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
112150994 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
FerA
Cro
Motif
Other DBs
NCBI-GeneID:
112150994
NCBI-ProteinID:
XP_024135322
Ensembl:
ENSOMEG00000001062
UniProt:
A0A3B3CVJ5
LinkDB
All DBs
Position
LG20:complement(2058387..2157020)
Genome browser
AA seq
1322 aa
AA seq
DB search
MSFHRDCGGPRGGMPPGQHSSAQNFRPTNMRTPPPQPHAPPYHYDPQATPTSGYPGGYMP
PDFMHYPPPAPPQTPGSVSQCPVRPPFPKSAARQGFQEPPPNFPPPPLPSAAAGSGPRVQ
VPSHGSYHPFMMPPPPLPRPPMPPPIASQSMNYHPPYPMNYPPFPPPTFIPNYSQSPGPF
QPDHGVRQGGQFKYEKPPESRRSPDRSFFQDDRQKSYCYGGDRRKTEFSGDRKERGRSPD
RSSRGDGGRYRSEYDKGRSPPRHRSRERYRHRERRSASPDKHRKRPRSRSSSRDRKRSRW
EEEKERRSEGFSRERSYTSVRTRDSEDASDREREREREREMAKAEEEKEEEELLKPAWIR
CTHAESYYSNDPMDQVGDSTVVGTSKLRELYGRLEEELGKRQERAKEARPKWEPPKTKLD
EDPDDSSSDSDCESDEDGSSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMND
GPLCKCSAKARRTGIRHSIYPGEEPVKPCRPMSNNAGKLFHYRITVSPPTNFLTDRPTVI
EYDDHEYLFEGFSLFSHKPLTSIPLCRVIRFNIDYTIHFIEEMAPENYCVRGLEMFAAYL
FQDILELYDWNLKGPDSDGETSGCQQFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSNKP
LVPEEEIADMLQWEQLDWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPII
VHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKKLDKQKLSQREEALQKIRQKN
TMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYVFKERCL
LQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKAHQMYMRKKGINTLINIMSRL
GQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAML
AKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLEEARLLFGRLLFNGE
DLREVWLNYPSHPLQVQEPQTDRQLIETSPVLQKLTSFEESIGVFFTHVRLLARAFTLRT
VGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAE
ELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEF
ILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCG
KGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERERQEKESDEAEEC
RK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcgggactgcgggggtcccagggggggcatgcccccgggtcagcacagc
tccgctcaaaacttccggccaaccaacatgaggaccccccctcctcagccccatgctccc
ccctaccactacgacccgcaggccacgcccacttcaggctaccccgggggctacatgccc
cctgacttcatgcactatccccccccagctcccccgcagacccctggatctgtgagccag
tgccccgtccggcccccttttccaaagtccgccgctcgccagggcttccaggagcccccg
ccgaacttcccgccgccccctctgcccagcgctgcagccggttccggtccgagggtgcag
gtcccgtctcacggctcctatcaccccttcatgatgcccccgccccctctgccccgccca
cccatgcctccgcccatcgcctctcagtccatgaactatcaccctccatatcccatgaac
tacccccctttcccacctcccaccttcatacccaactactcgcagagtcccggcccgttc
cagccggaccacggcgtccggcagggggggcagttcaagtacgagaagcccccggagagc
aggaggtccccagacaggagcttcttccaggacgaccgacagaagagctactgctacggc
ggcgacaggcgcaagacggagttttccggagaccggaaggaacgcgggcggagtccggac
aggagcagccggggggacggggggaggtaccggtccgagtacgacaaaggccggtcccct
ccacggcaccggagcagagaacggtaccgacaccgagagcggaggtcggcgtcacctgac
aagcacaggaagcgacctcgcagccgctcgtccagcagagaccgcaaacgcagccgctgg
gaggaggagaaggagcggcggtctgagggcttcagcagggagcgcagctacacctccgtc
cgcacccgggactccgaggacgccagcgaccgggagagggagcgggaacgagagcgggag
atggccaaggcggaggaggagaaggaggaggaggagctgctgaaacccgcctggattcgc
tgcacgcacgctgagagctactactccaacgaccccatggaccaggtgggagactccacc
gtcgtagggacgagtaaactacgcgagctgtacgggcgcctggaggaggagctggggaaa
cgacaggagcgggccaaggaggcccgacccaagtgggagccgcccaaaaccaaactggac
gaagatccagacgacagcagcagcgactcggactgcgagtcagacgaggacggaagcagc
tgctccagcagctccgactcggaggttttcgatgtgattgctgagatcaagaggaagaaa
gctcaccccgaccggctgcacgaggagctgtggtacaacgaccccggacagatgaacgac
ggccccctgtgcaagtgcagcgccaaggcaagacggacggggatccgccacagcatttac
cccggagaggagcccgtcaaaccctgccgccccatgagcaacaacgcagggaagctcttc
cactaccggatcaccgtgtctcctcccaccaacttcctgacggacaggccgacggtgatc
gagtacgacgaccacgagtatctgttcgagggattctcgctcttctcgcacaagccgctc
accagcattccgttgtgccgtgtgatccgcttcaacatagattacaccattcacttcata
gaggagatggcgccggagaactactgcgtccgagggttggagatgttcgccgcctatctg
ttccaggacatcctggagctgtacgactggaacctgaaaggtccagacagtgacggcgag
acgtctggatgccagcagttccacttcatgccccgcttcgtcagattcttacccgacgga
gggaaggaggtgctgtccatgcaccaggtgctgctctacctgctgcgcagcaacaagccg
ctggttcccgaggaggagatcgccgacatgctgcagtgggagcagctggactggcagaag
tacgccgaggagtgcaaaggcatgatcgtcaccaacccgggcatgaaacccagctctgtg
cgcatcgaccagctggacagggagcagttcaacccggacgtcatcaccttccccatcatc
gtccacttcggcatccggccggcccagctcagctacgccggagaccctcagtaccagaag
ctgtggaagagttatgtgaagctgcgccacctgctggccaacagcccgaaggtcaagaag
ctggacaagcagaagctgtcgcagagggaggaagctctgcagaagatccgtcagaagaac
accatgcgccgcgaggtgacggtggagctcagcagccagggcttctggaaaactggcatc
cgctccgacgtctgccagcacgccatgatgctgcccgtcctgacccaccacatccgctac
caccagtgcctgatgcacctggataagctgatcggctacgtcttcaaggagcgctgcctc
ctccagctcgccatgacgcaccccagccaccacctcaacttcggcatgaaccccgaccac
gcccgcaactccctgtccaactgcggcatccgtcagcccaaatacggcgaccggaaggcc
caccagatgtacatgaggaagaaaggaatcaacaccctgattaacatcatgtctcgcctc
gggcaggacgacccctccccctccaggatcaatcacaacgaacggctggagttcctgggc
gacgccgtggtggagttcctcaccagcgtccatctgtactacctgtttccaagcttagag
gaaggcggcctggccacctaccggaccgccatcgttcagaaccagcacttagccatgctg
gccaagaaactggagctggatcgcttcatgctttatgctcacgggccggacctgtgccgg
gaatcggacctgcggcacgcaatggccaactgctttgaggctctcattggcgcggtgtat
ttggaaggaggtttggaggaagctcggctgctctttggaagactgctcttcaacggtgag
gatctcagggaggtctggctgaactacccatctcaccccctgcaggtgcaggagcctcag
accgaccggcagctgatcgagacgtctccggttctgcagaagctgacctccttcgaggag
tccatcggcgtgttcttcactcacgtgcgcctgctggcccgcgccttcaccctgcggacc
gtcggcttcaaccacctgaccctaggtcacaaccagaggatggagttcctgggagactcc
atcatgcagctggtggctacggagtatctcttcatccacttcccagaccatcatgaagga
catctgacgctcctccgcagctcgctggtgaacaaccgcacgcaggccaaagtggcggag
gagctgggcatgcaggagttcgccatcaccaacgacaaaaccaagcgacccgtggcgctg
cggaccaagactctggcggatttactggagtctttcatcgccgctctctacatcgacaaa
gacctggagtatgttcacaccttcatgaacgtctgctttttccctcggctgaaggagttc
attctgaaccaggactggaacgaccccaaatcgcagctgcagcagtgctgcttgaccctg
aggacggagggcaaggagcccgacatcccgctgtacaagacccttcagacggtggggccc
tcgcacgcccgcacttacacggtggcggtttatttcaagggcgagcgcatcggctgtggt
aaaggcccgagcatccagcaggcagagatgggggcagccatggacgctctggagaaatat
aacttcccgcagatggctcatcagaagcgcttcatcgagcggaaataccgacaggagctg
aaggagatgagacgggagcgggagcggcaggagaaggagagcgacgaggcggaggagtgc
aggaagtga
DBGET
integrated database retrieval system
