Oryzias melastigma (Indian medaka): 112151006
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Entry
112151006 CDS
T07439
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112151006 (zeb1b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112151006 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
zf-C2HC_2
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
112151006
NCBI-ProteinID:
XP_024135361
Ensembl:
ENSOMEG00000021646
UniProt:
A0A3B3DZC5
LinkDB
All DBs
Position
LG20:complement(19372773..19433101)
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AA seq
1021 aa
AA seq
DB search
MADGPRCKRRKQANPRRTSVSNYNNVVEAGSDSDDEDKLHIVEEDGADCDGVPQDDEHPG
VLQWDPVKEDCPSDGEDDVSTDALVEKMLQQGDTAVIYPEAPDDEPPRQGTPDAGVHDEN
GTPDSFSQLLTCPYCSRGYKRYSSLKEHIKYRHEKTDESFSCPECSYSFAYRAQLERHMT
VHRNGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHS
GSYSSHISSKKCISIISVNGRQRVGGAKAQAQGPSPALSTSPSALCTQIREKLEHTKPLQ
EQLPLNQIKTEPVDYEYKPAVVTPPGMTAMSAGGVFGGGAAAPLQGTVQAVVLPTMGLVS
PISINLADLQNALKVAVDGSVIRQVLENKVQASAGLTTGTLHPPQQQLISAISLPIVGQD
GNAKIIINYSLDPSQGQLTPHNLKKEREETLSPFLQKLPEDLTVRAPNPPDIKEEKTTKN
CLLCENCPGGLEALHALKHCKKDVLRLNGAGRDRSESAIAALLSEGGFCHQPKNILSLLK
AYFALNAEPTKDELAKISDSVSLPVHVVKKWFDKMQEGQISLGAPTPPSEEEDTCEAHSV
VSLVPGRDAATKSPSVSQDSPTEATPAEVNGTHSFPASPSPLNLMAGSPVQAVTPQSTEG
PLDLSLPKPAREEAERVAVKAPIFLSASSGSPKEEQPLNLTCTKNNASPLSSTWGSPAAL
YAHQPSAKPLDIVTTMQCLRALATNNKQAILIPQLAYTYTTAASSPAGSETHDAGHINGI
KEEKQELSSEGVSALEEQNDSDSGPGRKKMKKTESGMYACDLCDKIFQKSSSLLRHKYEH
TGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYC
KKEAQSQESPEHGEALSRVQSELFPPSLLDLDERGSSTREEEESEEEEEEGMVDMEDIQV
VQIEEEEVSKGAEEVTEEVEEQVKAREEEEPAGSPEKDEAMETEENEGETKDNKEEKGDT
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccagcgtg
agtaactacaacaatgtggtggaggccggctcagactccgacgatgaggacaagctgcac
atcgtggaggaggacggcgccgactgtgacggcgtcccgcaggacgacgaacacccgggg
gtgctccagtgggacccagtgaaggaggactgcccctcagacggcgaggatgacgtgagc
acggacgccctggtggagaagatgctccagcagggggacacggccgttatctaccccgag
gcccccgacgacgagcctccgcgccaaggaacccccgacgccggcgtccacgacgagaac
gggactcccgactccttctcccagctgctcacctgtccctactgctcccgcggctacaag
cgctacagctccctgaaggagcacatcaagtaccggcacgagaagacggacgagagcttc
agctgcccggagtgcagctacagctttgcgtaccgcgctcagctggagaggcacatgacg
gtccacaggaacggaagggatcagaggcacatcacacagtccgggggcaatcgtaaattc
aagtgcaccgagtgtggcaaagcgtttaagtacaagcaccacctgaaggagcacctccgc
atccacagcggagagaaaccctacgagtgctccaactgtaagaagcgcttctcccactcc
ggctcgtacagctcccacatcagcagtaagaagtgcatcagcatcatctcagtgaacggc
aggcagcgcgtggggggggccaaagcgcaggcccagggcccttccccggcgttgtccacc
tcgccctccgccctctgcacccagatcagggagaagctggaacacaccaagccgctgcag
gagcagctgcccctcaaccagatcaagacggaacccgtggactacgagtacaagccggcc
gtggtgacgccgccaggcatgactgccatgagcgcagggggcgtgttcggtggcggcgcc
gcggctcctctgcagggcacggtgcaggcggtggtcctgcccaccatggggctggtgtct
cccatcagtatcaacctggcggacctgcagaacgccctgaaggtggcggtggacggtagc
gtcatccgccaggtgctggagaacaaggtgcaggcaagcgcggggttaaccactggaaca
ctccaccccccccagcagcagctcatctcagccatcagcctccccatcgtcggccaggac
ggcaacgccaaaatcattataaactatagcctggaccccagccagggccagctcacccca
cacaacctgaagaaggagcgcgaggagacgctgtccccgtttctccagaagctccccgag
gacctcaccgtcagagcccccaacccccccgacatcaaagaggaaaagaccactaaaaac
tgtctcctgtgtgaaaactgtcccggaggcttggaggctctccatgctctgaagcactgc
aagaaggacgttctccggctaaacggagcgggccgggaccgatctgagtccgccatcgcc
gccttgctgtcagagggggggttctgccaccagcccaagaacatcctgtccctgctcaag
gcctacttcgccttgaacgccgagccaaccaaggatgagctggccaagatctccgattct
gtcagcctgccggtccacgtggtcaagaagtggttcgacaagatgcaggaggggcagatc
tccctgggcgcccccacgcctccctcagaggaggaggacacctgtgaggctcacagcgtg
gtgtctttggttccggggagggacgcagccactaaaagcccgtcggtgagccaggacagc
cccactgaagccaccccggctgaagtcaacggcactcacagttttccggcctccccctcg
ccactaaacctgatggcgggcagtcccgtccaagctgtcaccccacagagcactgaggga
cccctggacctgtctctgccaaagccggccagagaagaggcggagcgagtggcggtgaaa
gccccaatcttcctctccgcctcctctggctcccccaaagaggagcagcccctcaactta
acttgcacaaagaacaacgcatcgccactctcgtccacgtgggggagccccgccgcactg
tacgcccaccagccaagtgccaaacccctcgatattgtaaccacaatgcaatgcctcaga
gcgctcgccaccaacaacaagcaggccatcctcatcccacagctggcttacacctacacc
acggcggcgagcagccccgcaggcagcgagacacacgacgccggccacatcaacggaatc
aaggaggagaagcaggagctgagctccgagggcgtctctgcgctggaggagcagaacgac
tcggactccggccccggcaggaagaagatgaagaagacggagagcggcatgtacgcctgc
gacctgtgcgacaaaatcttccagaagagcagctcgctgctgaggcacaaatacgaacac
acagggaagcggcctcacgagtgcggcatctgcagcaaggccttcaaacacaaacaccac
ctgatcgagcacatgcgcctccactccggggagaagccctaccagtgcgacaagtgcggc
aagcgcttctcccactccggctcctactcgcagcacatgaaccaccgctactcctactgc
aagaaggaggcgcagagccaggagagccccgagcatggcgaggctctgagccgggtgcag
agcgagctgttccctccctccctgctggacttggacgaaagagggagcagcaccagagag
gaggaggagagcgaggaggaggaggaggaaggcatggtggacatggaggacatccaggtg
gtgcagatagaagaagaggaggtgagcaagggtgcagaggaggtcacagaagaggtggag
gagcaggtgaaagcaagggaggaggaggagccagcagggagccccgagaaggacgaggca
atggaaacggaggagaacgaaggggagacgaaggacaataaagaggagaaaggagacact
gactga
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integrated database retrieval system
