Oryzias melastigma (Indian medaka): 112151009
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Entry
112151009 CDS
T07439
Symbol
arhgap12b
Name
(RefSeq) rho GTPase-activating protein 12b isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112151009 (arhgap12b)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112151009 (arhgap12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
PH
WW
SH3_1
PH_9
SH3_9
SH3_10
Motif
Other DBs
NCBI-GeneID:
112151009
NCBI-ProteinID:
XP_024135365
Ensembl:
ENSOMEG00000021574
LinkDB
All DBs
Position
LG20:19287546..19349982
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AA seq
835 aa
AA seq
DB search
MSDREGLPVPPGQVYIEVEYDYEYKAKDKMVTIRQGECYMLVKKTNEDWWQVKRDESAKA
FYVPAQYVKEVRRALMPPQKPALKAKPTVLDISREPNDNHSRPEMSSFGRPSPSSTPSPS
SDRVTPPALPKDANQNLGSPHHCKLVAELVLLHNNNNHHHGNSSSLPRNRADSPPLRGGS
LDKSAPMSELRGDGPNKLRNDSESGDELSSSSTEHMQTTSPTGQIRPDSPVYTNLQELKI
SQSSPPPVPSGSPIHILGDWETHKDLSGRHFYYNRASGERTWKPPRTRDASGSISSIRGD
SQGTVENELLSSEENCHSTHSSQSDSQYGSPPRGWSEELDEHGHTLYVSEHTQEKWIKHV
DEQGRPYYYSADGSRSEWELPKYNVSPQSSELPKSRSLERKQQDPIVLTKWRHSTYVLDL
NDKECAPVLKQSSTDSDSCPSSPKLSPTPSEKCGVLNVTKITENGKKVRKNWTSSWTVLQ
GSSLLFAKGQGGGTTWKFGSNQSKPEFTVDLRGASVEWASKEKSSKKHVIELKTRQGTEL
LIQSEIDSVANDWYRALTEAINTHAWESDEAIEEDMPESPGAEKQDKEKDHRDSKKNRMM
KTSVSMDSSDQKKTRMKLKKFLTRRPTYQAVRDKGYIKDQVFGCSLTSLCQRENTTVPNF
VRMCMEHVENTGLSVDGLYRVSGNLAVIQKLRFAVNHDETVDLNDSKWEDIHVTTGALKM
FFRELPEPLFTYGSFYDFVNAIKCSDYKQRVNAVKDLIKKLPKPNHDTMQALFKHLRRVV
EHGEANRMTSQSVAIVFGPTLLRPETETGNIAVHMVYQNQIVELILLEYDSVFGR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccgggagggccttccggtccccccgggacaggtctacatcgaggtggagtac
gactacgagtacaaggccaaagacaagatggtgaccatccgtcagggagaatgctacatg
cttgtgaagaagaccaacgaggactggtggcaggtcaagagggacgaaagcgctaaggcg
ttctatgttccggcgcagtacgtcaaggaggtgcggcgggccctcatgcccccgcagaaa
cctgccctgaaagccaaacccacggttctggatatcagccgggagcccaacgataaccac
agcaggccggaaatgtccagtttcggtcgtccgtcgccatcttctacgccttcgccgtct
tctgaccgcgtcacgccaccggcactccccaaggatgccaaccagaacctgggaagtccg
catcactgcaagctggtggcagaactggtcctccttcacaacaacaacaatcatcaccat
ggaaacagctcctctctgcccaggaaccgggcggattctcccccactgcgagggggtagc
ctcgacaagagcgcccccatgagcgagctgcggggggacggtccgaacaagctccgtaac
gactcggagtccggggacgagctgagcagcagctcgacggagcacatgcagacgacgtcc
cccacaggtcagatccggcctgactctccggtctacaccaaccttcaggagctgaagatc
tctcagtccagccctcctcccgttccctccggctccccgatccacatcctgggtgactgg
gagacccacaaagacctcagcggcaggcacttctactacaaccgggcctccggcgagagg
acctggaagccgccgcggaccagagacgccagcggcagcatcagcagcatcagaggagac
agccagggaacggtggagaatgagctgctgtcctcagaggagaactgccacagcacccac
tccagtcagtccgacagccagtacgggtcgccccctagaggctggtcggaggagctggac
gagcatggacacacgctctacgtgtccgagcacacgcaggagaagtggataaagcatgtg
gatgagcagggacggccgtattactacagcgccgatggatccaggtcagagtgggagctg
ccaaagtacaacgtctcccctcagtccagcgagcttcccaagagccgcagtctggagcgg
aagcagcaggaccccatcgtcctaaccaaatggaggcacagcacctacgtcctcgacctc
aacgacaaggagtgcgctccggtgctgaagcagagctccacagactctgactcctgcccg
tcgtctcctaaactctctccgaccccctcggagaagtgtggagtcctcaacgtcaccaaa
atcaccgagaacgggaaaaaagtcaggaagaactggacctcctcctggaccgtgctgcag
ggctcctccctcctctttgccaagggtcagggaggagggaccacctggaagtttggcagc
aatcagtcgaagccggagttcaccgtggatctccgcggagcatcggtggagtgggcctcc
aaggagaagtccagcaagaagcacgtgatcgagctgaagacccgacagggcacggagctg
ctgatccagtctgagatcgacagcgtcgccaatgactggtaccgggccctcacggaggcc
atcaacacgcacgcttgggagtcagacgaggccatcgaggaagacatgccagagtctcca
ggagccgagaagcaggacaaggagaaggaccaccgggactccaagaagaacagaatgatg
aagacctctgtgagcatggattcttcagaccagaagaaaaccaggatgaagctcaagaag
ttcctgaccagacggcccacctaccaggcggtccgagacaaaggctacatcaaagatcag
gtgttcggctgcagtctgaccagtctgtgccagcgggagaacacgacggttcccaacttc
gtcaggatgtgcatggagcacgtggagaacacgggtctcagtgtggacggtctgtacaga
gtcagcgggaacctggccgtgatacagaagctgcgctttgctgttaaccacgatgagacg
gtggacctgaacgacagtaagtgggaggacatccacgtcaccaccggcgctctgaagatg
ttcttcagggagcttcccgagccgctcttcacctacggctccttctacgactttgtgaac
gccatcaagtgctccgactacaagcagagagtcaacgccgtcaaagacttgatcaagaag
ctgccaaagcccaaccacgacacgatgcaggcgctcttcaaacacctgcgcagggtggtt
gagcacggagaggccaaccgcatgacctcccagagcgtggccatcgtgttcggacccacg
ctgctgcggcccgagacggagacgggcaacatcgccgtccacatggtctaccagaaccag
atagtggagctgatcctgctggagtacgacagcgtgttcgggaggtag
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