Oryzias melastigma (Indian medaka): 112151023
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Entry
112151023 CDS
T07439
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112151023 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112151023 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112151023 (shha)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C46: hedgehog family
112151023 (shha)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Morphogens
112151023 (shha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DrmE_C
Peptidase_M15_3
Intein_splicing
VldE
Vint
Hint_2
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
112151023
NCBI-ProteinID:
XP_024135386
Ensembl:
ENSOMEG00000004319
UniProt:
A0A3B3BD40
LinkDB
All DBs
Position
LG20:7391775..7399146
Genome browser
AA seq
410 aa
AA seq
DB search
MLLWAKFVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTITLEDGTKRPVRDLQPGDRVLAADYEGNPVYTDFIM
FIDRDASTSRIFYVIETESGQKVTLTAAHLLFIAQNSTQPRMSAVFASQVRPGQKVFVFG
RGQLTPVTVKRIYTQRHEGSFAPVTAQGTVVVDQVLASCYAVIEDHRLAHWALAPVRLAH
WASTLLFGSQPRASAQNDGVHWYSKLLYQLGTWLLDSHSIHPLGMSVSPS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctgggccaaatttgttttggtcggcctcatctgcttgtccttagtgtcttct
gggatgggctgcggaccgggaaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaaaatcaccagaaactccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggagccgacaggctcatgactcag
agatgtaaagacaagctgaattcgctggcgatctcggtgatgaaccagtggcccggagtg
aagctgcgggtcacggagggctgggatgaggacggacaccacttcgaggagtccctgcac
tacgagggcagggccgtggacatcaccacgtcagacagggacaagagcaagtacggcacc
ctgtccaggctggcggtggaagctgggttcgactgggtctactatgagtccaaagcgcac
atccactgctcagtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggatcctccacgatcaccctggaggatggcaccaagaggcccgtcagagatctccaaccc
ggggatagagttctggccgcggattacgagggaaacccggtttacaccgacttcatcatg
ttcatagaccgggacgcgtccaccagcaggatcttctacgtcatcgagacggagtctggc
cagaaagtgaccctcaccgccgcgcacctcctcttcatcgcccagaactccacacagccg
cggatgtcggcggttttcgccagccaagtccggccgggacagaaggtgttcgtgttcggg
cgaggtcagctgacgcccgtgaccgtgaaaaggatttacacgcagaggcacgagggctcc
ttcgcgccggtgacggcgcaggggaccgtggtggtggatcaggtcctcgcgtcctgttac
gcagtgatcgaggatcaccgcctggcgcactgggccctggcaccggtccggctcgcccac
tgggcgtccacgttgctcttcggctcccagccgcgcgccagcgcgcagaacgatggggtg
cactggtactccaaactcctttatcaactggggacttggctcttggacagccactcgatc
catccgctcgggatgtcggtatccccgagctga
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integrated database retrieval system