KEGG   Oryzias melastigma (Indian medaka): 112151023
Entry
112151023         CDS       T07439                                 
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
  KO
K11988  sonic hedgehog
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    112151023 (shha)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oml01002]
    112151023 (shha)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oml00536]
    112151023 (shha)
Peptidases and inhibitors [BR:oml01002]
 Cysteine peptidases
  Family C46: hedgehog family
   112151023 (shha)
Glycosaminoglycan binding proteins [BR:oml00536]
 Heparan sulfate / Heparin
  Morphogens
   112151023 (shha)
SSDB
Motif
Pfam: HH_signal Hint DrmE_C Peptidase_M15_3 Intein_splicing VldE Vint Hint_2 Ribosomal_S6e
Other DBs
NCBI-GeneID: 112151023
NCBI-ProteinID: XP_024135386
Ensembl: ENSOMEG00000004319
UniProt: A0A3B3BD40
LinkDB
Position
LG20:7391775..7399146
AA seq 410 aa
MLLWAKFVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTITLEDGTKRPVRDLQPGDRVLAADYEGNPVYTDFIM
FIDRDASTSRIFYVIETESGQKVTLTAAHLLFIAQNSTQPRMSAVFASQVRPGQKVFVFG
RGQLTPVTVKRIYTQRHEGSFAPVTAQGTVVVDQVLASCYAVIEDHRLAHWALAPVRLAH
WASTLLFGSQPRASAQNDGVHWYSKLLYQLGTWLLDSHSIHPLGMSVSPS
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgctgctctgggccaaatttgttttggtcggcctcatctgcttgtccttagtgtcttct
gggatgggctgcggaccgggaaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaaaatcaccagaaactccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggagccgacaggctcatgactcag
agatgtaaagacaagctgaattcgctggcgatctcggtgatgaaccagtggcccggagtg
aagctgcgggtcacggagggctgggatgaggacggacaccacttcgaggagtccctgcac
tacgagggcagggccgtggacatcaccacgtcagacagggacaagagcaagtacggcacc
ctgtccaggctggcggtggaagctgggttcgactgggtctactatgagtccaaagcgcac
atccactgctcagtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggatcctccacgatcaccctggaggatggcaccaagaggcccgtcagagatctccaaccc
ggggatagagttctggccgcggattacgagggaaacccggtttacaccgacttcatcatg
ttcatagaccgggacgcgtccaccagcaggatcttctacgtcatcgagacggagtctggc
cagaaagtgaccctcaccgccgcgcacctcctcttcatcgcccagaactccacacagccg
cggatgtcggcggttttcgccagccaagtccggccgggacagaaggtgttcgtgttcggg
cgaggtcagctgacgcccgtgaccgtgaaaaggatttacacgcagaggcacgagggctcc
ttcgcgccggtgacggcgcaggggaccgtggtggtggatcaggtcctcgcgtcctgttac
gcagtgatcgaggatcaccgcctggcgcactgggccctggcaccggtccggctcgcccac
tgggcgtccacgttgctcttcggctcccagccgcgcgccagcgcgcagaacgatggggtg
cactggtactccaaactcctttatcaactggggacttggctcttggacagccactcgatc
catccgctcgggatgtcggtatccccgagctga

DBGET integrated database retrieval system