Oryzias melastigma (Indian medaka): 112151094
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Entry
112151094 CDS
T07439
Symbol
scrib
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112151094 (scrib)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
112151094
NCBI-ProteinID:
XP_036073209
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All DBs
Position
LG20:complement(5192298..5265506)
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AA seq
1891 aa
AA seq
DB search
MLKCIPLWRCNRHVESIDKRHCNLQTVPDEIFRYSRSLEELLLDFNQLKDLPKPFFRLLN
LRRLGLSDNLLQKLPPDVSNFMQLVELDLSKNEICEIPESIKFCRALEIADFSGNRLPRL
PDGFTQLRALAHLTLNDVSLQTLPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGNNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSEVS
GLLALTDLLLTQNMLEVVPDSIGSLKQLSILKVDQNRLTHLTDSVGECENLTELVLTENL
LQSLPSSLGKLKKLTNLNVDRNRLGNVPKELGGCTSLNVLSLRDNRLDRLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEEEEEDEEAAAERRGLQRRATPHPS
ELKVMKKGMEDRRNDAYTPRTDEEESLDPQEKRLSDLSNQSHDSHSTLSATSHEDRHAAP
QREDLVDGHAQEEEELDEMEVEYIEPTVHFAEEPIIRGGEEEDDDEGENGERSDEEDERP
VYAAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDGLNAPPPPAREDEEDEDD
EEEEEESFSTPQRRVEDVEDSRHHINSSQVKGVSFDQVNNLLIEPARIEEEEHTLTIVRQ
TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEAEHH
TAVEALRSSGAAVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLGFGADASPPG
PRQRFSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHRDSTLRVGDRVI
SINGVDMTEARHDQAVALLTGTSPTITLLVERDLNAPAGSPGQNRARSHSPPPPEPSDSP
DQEEDGFQGNHLGRLEDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPGVFISKV
IPHGLASESGLRVGDRILEVNSTDLRHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEV
FIQKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGMRILEVN
NHSLLGMTHTEAVRVLRAVGDSLVVLVCDGFDPRKVAAVEASPGIIANPFATGIVRKNSI
ESISSIDRELSPEEMDILQKESEMVRETSQWEREEMEKVERMRLEREEATRLLEEETENI
GGGPLKLDYKTLAALPTTSLQKVNRAPSSDYTRTDSPIREAPYSPSFQPPSHHSSSSSLC
AGRETRFANIHFSPNAKDSPPSSTRPGAIQPVGRVRPGASPSTPDGHSQNPFQHDPSPFN
SQTSPRAPSPTSPDEFPMNVKQAYKAFAAVPRSLAVLEPPQDPYGVRNNLHPKQPSPEPN
NDVFDDDLDGQGAGPPWPSLSSERQEYMNLAAVPRLSRLTQNRQSPSPGDKHTPEQRSFR
DRQKYFEIDVKQQTPDKPKPRVSLVGEDDLKKMREEEERRFEQRAREYLLDEEEDEDEEE
DLAKQVAQMKATGKVLLDGVEYKVEPVSPPPQHGSTAANYSFTPPSHHGGGSGFSSFDSK
GDSERNSLVDSFQRPNSMTGLIPVYPGESSAPVRTAKAERRQHERLRMQSPELAVAPDKD
LSPAEKRALEAEKRAMWRAARPLEEDVRQYEQDLAKRLYQARVRAAQGTAPQPPTSSSAA
PPQLRMKSLEQDALKAQMVIAKSRDSKKRGALDQLTESPSPAPTPSPTPMEELNPRGLTS
PGRLSAPSKKFDYRQFAAIPSSKPVYDIQSPEMSENIQYIDSSGGPGNNANPEVEAPPPL
PATSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcgattgacaagcgg
cattgcaacctgcagaccgtccctgatgaaatcttccgctacagccggagtttggaggag
ctcctgctcgatttcaaccaactcaaagatctaccaaagcctttcttcagactactgaac
ctccgcagacttggcctgagcgacaacctgctccagaaactccctcccgatgtgtccaac
ttcatgcaactggtggaactggacctctccaaaaatgaaatctgtgagatcccagagagc
atcaagttttgccgggccctggagatcgcagacttcagcgggaaccgtctgcccagactg
ccggacggtttcactcagctgcgagctctggctcacttgacgctcaacgatgtgtctttg
cagacgttacccagcgacattgggaatctggccaacctggtgacgctggagctcagggag
aacctcctgaaatctctgcccacgtcgctctcttttcttgtaaaactggaacagctggac
ctcggcaacaatgaactggaagttttgcccgacaccctcggtgctctccccaacctgcgg
gagctgtggttagatcgtaaccagttgtcctccttacccccagagctgggaaaccttcgg
cggctggtgtgtctggatgtgtcggagaaccgcctggaggaacttccctcagaggtcagc
ggcctcctggctctgaccgacctgctgctcactcagaacatgctggaagtcgtccctgac
agcataggttctctgaaacagctttccatcctcaaagtggaccagaacaggctgacccac
ctaaccgactcggttggagagtgtgaaaacctcacagaactcgttctgacagagaacctt
ttacagtctcttccgagctccctgggaaagctgaagaagctgaccaatctgaatgtagac
cggaaccggctgggcaacgtgcctaaagagctgggcggctgcaccagcctcaacgtcctc
tctctgagggacaaccgcctggacagactgcctgctgagctggcagacgccactgagctg
cacgtgctggacgtggctggaaacaggttacaaaatttgcctttcgccttgacaaacctc
aacctgaaggccatgtggctggcagagaaccagtcgcagcccatgctcaagttccagacg
gaggacgacgagcggaccggagagaaggtgctgacctgctacttactgccccagcagcct
tcacccagcctcgaaaacctgctgcagaacagcgtggacgacagctggacagacagcaac
ctgaaccgagtgtccgtcattcagttccaggaggagaccaaggcagaggaagaggaggag
gacgaggaggctgcagcggagcgccgaggcctccagcgcagagcgacgccgcacccgagc
gagctgaaggtgatgaagaagggcatggaggaccggaggaacgacgcctacacgcctaga
accgatgaagaggaatcgctcgaccctcaggagaaacgcctcagtgacctttccaatcag
agccacgactcccacagcacgctgtcggccacctcccacgaggaccggcacgccgcgccg
cagagggaggatctggtggacggacacgctcaggaggaggaggagctggatgagatggag
gtggagtacatcgagccgaccgtgcactttgcagaggagcccatcatccggggtggggag
gaggaggacgacgacgaaggagagaacggcgagaggagcgacgaggaagacgagcggccg
gtttacgccgcagagaagcagcggctcatccggaaggacacgccgcactacaagaagcac
ttcaaaatcaccaagctgcccaaacccgaggctgtggcggcgctgctgcagggcttcagc
cccgacggcctcaacgccccgccgccgccggctcgggaggacgaagaggacgaggatgac
gaggaggaggaggaggaaagcttcagcactcctcagcgcagagtggaggacgtggaggac
agccggcatcacatcaactccagtcaagtgaagggggtgtcatttgatcaagtcaataat
ctgctgattgaacctgctcgaattgaggaggaagagcacactctgaccatcgtgcgacaa
acgggcggcctcggcatcagcatcgccggggggaaaggatctacgccgtacaaaggagat
gacgagggaatcttcatctccagagtgtctgaggagggtcctgcggcgagggcgggggtg
aaagtgggagacaaactcctggaggtaaacggtgtcgacctgcatgaagcggagcaccac
actgcggtggaggccctgcgcagctccggcgccgccgtctccatgacagtgctgcgggag
cgcatggtggaaccggagaacgccatcaccaccacgccgctgaggcccgaggacgactac
ttcccacgggagagacggagcagcgggctgggcttcggcgcggacgccagcccccccggg
ccgcggcagcgcttctccacctgcctgatccgcaacgacaagggtctggggttcagcatc
gccggggggaaaggctccacgccgtaccgcacgggagacacgggaatctacatctccaga
atagctgaaggtggagcggcacacagagacagcacactgcgagtgggcgacagagtgatc
tctatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagctctgcttacc
ggcacctcccccaccattacactactggtggagcgagacctgaatgcaccagcgggctct
ccaggtcagaaccgggcgcgctcccactccccgccgcctccagagccgtcggattctcca
gaccaggaggaagacggcttccaggggaaccatttgggccggctggaggacgagtacccc
atcgaggaagtcaccctggtgaagtcaggaggtcctctgggcctgagcatcgtcggcggc
agcgaccacgccagccatcctttcggcataaacgagcctggagtcttcatctcgaaggtg
attcctcacggtctggcaagtgaaagcggcctgcgcgtcggtgaccgcatactggaggtg
aactccaccgacctgcggcacgccacgcaccaggaggcggtgcgcgccctgctggccaac
aagcaggagatccggatgctggtgcggagggacccgtcaccccctgggatgcaggaagtc
ttcatccagaagcagcccggagagaagctcggcatcagcatccggggcggagccaagggg
cacgccggaaaccccttcgatcccacagacgagggcatcttcatttccaaggtcagctcg
acaggagctgcagcgagagatggacggctgcaggttgggatgcggattctggaggtgaac
aaccacagcctcctggggatgacccacacggaggcggtgcgggtcctgcgggcggtcgga
gactctttggtggtgctggtgtgtgacggctttgacccacgcaaggtggccgctgtggag
gcgtctcctgggatcatcgctaacccgtttgcgacaggaatcgtacgcaagaacagcatc
gagagcatctcctccatcgaccgggagctcagcccagaggagatggacatcttacagaag
gaatcggagatggtgagagagacgtcacagtgggagcgagaagagatggagaaagtggag
cgaatgcgcttggagcgtgaggaggcaacacgcctgctcgaggaggagacggagaacatc
ggcggcggacctttaaagctcgactacaaaacgctggccgctctgcccaccaccagcctc
cagaaagtcaacagggcgccctcctccgattacacccgaactgacagccccatcagggag
gcgccgtactcgcccagcttccagccgcccagccaccactcctccagcagctccctgtgt
gcaggcagggagacccgctttgcaaacattcatttctctccgaacgccaaggacagcccc
ccatcatcaacgcgacccggtgccatccagccggtggggcgcgtgcggcccggcgcctcc
ccctccacgccagacggacacagccagaaccccttccagcatgacccctcccccttcaac
tcccagacctctcctcgcgccccctcccccacttcgcccgatgagtttccaatgaatgtc
aagcaggcatacaaggcgtttgccgccgtgccgcgctcgctggcagtgctggagccgccg
caggacccgtacggcgtgaggaacaatctccacccgaagcagccttctccagagcccaac
aacgacgtgttcgatgacgacttggacggtcagggggccggccccccctggccctccctg
tcctctgagcgtcaggagtatatgaacctggcagctgtgccccgcctctccaggctgacc
cagaaccggcagagtccttcgcccggcgataaacacaccccagagcagcgctccttccgg
gaccggcagaaatactttgagatcgacgtgaagcagcagactccagacaaacccaaaccc
cgcgtttccctcgtcggagaggacgacctcaagaagatgagagaagaagaagagaggaga
tttgagcagcgggcgcgagaatacctgctggacgaggaggaggacgaggatgaagaggag
gacctggccaagcaggtggcgcagatgaaggcgacggggaaggtgttactggatggagtg
gagtataaggtggagccggtgtccccgccgcctcagcacggctccacggcagcgaactac
agcttcaccccgccgagccaccacggcggcggctcagggttctcctcgtttgacagtaaa
ggagactcggagaggaactcgctggtggacagcttccagaggcccaactctatgaccggt
ctgatcccagtttaccccggagagtcatcggctcccgtccgcacggccaaggcggagcgg
cggcagcacgagaggctccgcatgcagagcccggagctggccgtggcccccgacaaggac
ctgtcccccgcagagaaacgcgctctggaggctgagaagagggccatgtggcgggcggca
cggcccctagaggaggatgttagacagtatgagcaggacctggcaaagcggctctatcag
gcccgagtgagagccgcccagggcaccgccccccagccccccacttcctcctctgcagct
cctccccagctcagaatgaagtctttggagcaggacgctttgaaggctcagatggtcatc
gccaagtccagggacagtaagaagcggggggcgctggaccagctgacagagtccccctcc
cccgccccgacaccctcccccacgcctatggaagaactcaatcctcgagggttaacctca
ccgggccgactgtccgcgccatcaaagaagtttgactaccgacagtttgccgccattcct
tcttccaaacccgtttacgacatccagtcccccgaaatgagcgaaaacattcagtacatc
gacagctccggcggtccagggaacaacgcaaacccagaagtcgaggcccctcccccactg
cccgccacctcagccctggaggagatggcgctgtacagcaacaaacgcaaactgaggcag
ggccgccgcagcctggagacggccgtccccacatag
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