Oryzias melastigma (Indian medaka): 112151109
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Entry
112151109 CDS
T07439
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112151109 (rreb1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112151109 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
112151109
NCBI-ProteinID:
XP_024135550
Ensembl:
ENSOMEG00000001389
LinkDB
All DBs
Position
LG20:23176391..23218840
Genome browser
AA seq
1814 aa
AA seq
DB search
MIKRLCSVCFWKYNGRGEKKSHTLRRKRVMENATEEGGATAELNKEEAEPREKVPQQELK
EAMNGVLEEAKEAAGGEELSSINAMMSAVMSAGTINGGDAENGSGAASVNSSAGPSPSPS
PGKLVTAATRAPPSRNARRNQDAKDDSSAFICPLCDKNCQTQHQLTMHIRQHNADTGATD
HSCSICGKCLSSASSLDRHMLVHSGERPYKCSVCGQTFTTNGNMHRHMKIHEKDPASGLP
PISSPPSPTKRRRPSVKRRQGHDEENDDEPQSKKVMEDGVAEEEAVGAGLGSEEELLPCP
ICFKTCSSRLDLDAHMDSHPDTALRCDLCCLSFRTHRGLLRHNAGVHKLLPQDPNGRPFI
QNNPSIPTGFNDLAFIDFSCKKFAQIAQVWCETNLRRCISKFHRFVCDGCDKAFPLRSAL
ELHKSTSHPDAPAATDGAKEKAEEDRATENGVGGQDTKDPPPIQANFLEGLGLLHVSKVK
SGPTDDEIHQAYLDSIKVIHVEPPSSSLPQEPASGFLSGGLGLTLGLGGLAALSIPLLEA
SGSVLQGLSQGDALRLLSLQPFQKGFLLQPDGGVTAASAASSGAKPGEAGGGEIMELADI
QQILKVAAAAPNQMGLPPLAKAPGFAAGPSQKAMPPLKPKPPNSPCSSLTATTPPPLQSS
QQASLGCISPGLPPPTPYKASPSAGTAGQGDAESLGDSPVSDSPPTAITAVNEEAGLGGR
KLGTKAGGGAGSVKGSYPCRFCNEVFAFSGVLQAHMRFHLGIIPHQCNICDYVAPDKATL
IRHLRTHSGERPYVCRVCHYPFTVKANCERHLRKKHAKTSRKDIEKNIKYVTSTTTTISA
PITPTADSEMGCAGAETTCRFCGEDLKSYRALQIHLRTHNGCQKKPFECRRCGAAFLAKR
NCIHHLLKQHPEVQEREIEEHIATLLPASTVMAARSTAQLPPNGLIPVQVLSAVKVEELP
HLVYPADLDQPLDFSAKGRSSRGGSPSVKVESFDCSALDQPIDLSIPSKRQRREAGPDMT
DIKTEQSGGLEQTYALALSKDEKALGGLHPHPQLGCYQLPPGSTPPPAPLAGPPRAQRLK
PLLPKPTSTASPPSLKELPPLASIAQIISSVSTAQDLLKREAASLDGKTHLPAASLNPPV
DAAGAAAAQSEEAPDCRRRSKKKPASVGGKEKPGAIDLESSGEFASVEKMLATTDANKFS
PFLKTGAGDLSGKKDSDRTAGGGEEEAGAAEEVKPAAPQSKGKKNAYSNSVQKMTCPFCP
RVFPWASSLQRHMLTHTGQKPFPCPRCDAFFSTKSNCERHLLRKHGVTHRTLRRNGIIEK
KDGDEGSHESAESQSETEQVAPDAQQQVNVAANPVPAPTVENPSPHESTQLSPAHKSNQD
CSLTAEQPQEETPEQHDQQEAQEPPAAPAKQHPQSGKVESTDDEDCHSNKSLDLNFGKKL
IDFKLTTSSSGSAPQDEQPTSSSAPSASATPEPTESPEEKEKPSAGSPSLRSDSKHVCHV
CKKSFRYPTTLARHERAHISEETPSDEAPPTQTEEPTESKAADEETEDKELEMEEGGKGG
DSEGGESGESEEEKEKEERSDEEASEPKSAEGGEAAGGRVDKRKKICSVCGKRFWSLQDL
TRHMRSHTGERPYKCQTCERTFTLKHSLVRHQRIHQKLRGADGSSVANDYASEDGDSCTP
TPTSTCPPSENESECGSTIVGAKELEEEDAAKEDGEGQREDPPATEADVPAEQPDSEPEE
PDSAAPSADQTEQATESKTSIDAQPTPPKDLPPAGDAATGPSTQGFIQGLLEIHSKPPLE
HIVPNGKPPLVGVD
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacggctttgcagcgtgtgtttttggaaatataatggcagaggagagaagaaa
agtcacacattgaggagaaaaagagtcatggagaacgccacagaggagggaggagctacc
gccgagctcaacaaggaagaggcggagccaagagagaaagtacctcaacaggagctgaaa
gaagccatgaacggcgtgctggaggaggccaaggaggcggcaggaggagaggagttgtcg
tccatcaacgccatgatgtcagccgtgatgtcagcggggaccatcaacggaggcgacgca
gagaacggcagtggagccgcctcggtgaactcctccgcaggcccctcccccagtccctcg
cccggaaagctggtgacggccgccacgagagctccgcccagccgcaacgcaagacgcaac
caggacgccaaagacgatagctccgccttcatctgtccgctctgtgacaagaactgccag
actcagcaccagctgaccatgcacattcgacagcacaacgccgacaccggcgccacggat
cactcctgcagcatctgcgggaagtgcctgagctcggcctcgtcgctggacagacacatg
ctggtgcacagcggcgagcggccgtacaaatgcagcgtctgcgggcagaccttcaccacc
aacggaaacatgcacagacacatgaagatccacgagaaggacccggccagcggcctgccg
cccatcagcagccccccctcccccaccaagcgccgccgcccctccgttaagaggaggcag
ggccacgacgaggagaacgacgacgaaccccagagcaagaaggtgatggaggacggcgtg
gccgaggaggaggctgtgggggcggggctgggctcggaggaggagctgctaccgtgtcca
atctgcttcaagacctgcagctccagactggatctggatgctcacatggactcgcaccct
gacaccgccctgaggtgtgacctctgctgcttgtctttccgaacgcaccgcggcttactg
cgccacaacgcgggggtccacaaactcctcccccaggaccccaacggccgccccttcatc
cagaacaacccctccatccccactggcttcaacgacctggcgttcatcgacttctcctgc
aagaagtttgctcagatcgcgcaggtttggtgcgagacgaatctgcggcgctgcatcagt
aagttccatcgcttcgtctgcgacggctgcgacaaggccttccctctgcgttcggctttg
gagctgcataaaagcacctcccaccccgacgctcctgccgccaccgacggcgccaaagag
aaggccgaagaggacagagccacagaaaacggcgtgggagggcaggatactaaagacccg
cccccaattcaggccaacttcctggagggtttgggcctcctgcacgtgtcaaaggtgaag
tctggccccactgacgacgagatccaccaggcctacctggacagtataaaggtgattcac
gtggagccgccgtcctccagcctcccccaggagcccgcctctggcttcctctctgggggt
ctggggttgaccttgggtctgggggggctggccgctctgagtatcccgctgctggaggcg
tccggctctgtcctgcagggtttgtctcagggggacgcgctgcgcctgctgtccctgcag
cctttccagaagggcttcctgctgcagcctgacgggggcgtcaccgccgccagcgccgcc
tcctcaggagccaagcccggggaggcgggcggcggcgagatcatggagctggcagacatc
cagcagatccttaaagtggcagccgctgcgcccaatcagatgggactgccgcctctggcc
aaagctccaggattcgctgcaggtccgagtcagaaggcgatgcccccactgaaacccaaa
ccccccaacagcccttgttccagcctgacagcaaccaccccgccccccctgcagagctcg
cagcaggcctctctgggctgcatcagccccggcctgccgccccccaccccctacaaggcg
tccccgtcagctgggactgcgggacagggggatgcagagagcctgggtgactccccggtc
tccgactccccacccaccgccatcacagccgtgaacgaggaggcggggctcggagggagg
aagctggggacaaaagcggggggcggcgccggctcggtcaaaggctcgtacccctgccgc
ttctgcaacgaggtgttcgccttctccggcgtcctgcaggctcacatgcgcttccacctg
gggatcatcccccaccaatgcaacatctgcgactacgtggcgccggacaaggccacgctg
atccgccacctgcgcacgcacagcggggagcggccgtacgtctgccgcgtctgccactac
cccttcaccgtcaaggccaactgcgagcgccacctcagaaagaagcacgccaagacgtcc
aggaaggacatcgagaagaacatcaagtacgtcacctccaccaccaccaccatctccgcc
cccatcacccccacagcggactcggagatgggctgtgccggagcggaaaccacctgtcgc
ttctgcggcgaggacctgaagagctaccgcgcgctgcagatccacctgcgcacgcacaac
ggctgccagaagaagccgttcgagtgccggcgctgcggcgccgccttcctggctaagcgg
aactgcatccaccacctgctgaagcagcaccctgaggtgcaggagcgggagatcgaggag
cacatcgccacgctgctgcccgccagcaccgtcatggccgcacgcagcaccgcccagctg
cccccgaacgggctgatcccagttcaggttctgtcggcggtgaaggtggaggagctgccc
cacctggtctaccccgcagacctggaccagccgctcgacttctccgccaagggccgcagc
agccgggggggttctccctcagtcaaggtggagagcttcgactgctccgccctcgaccag
cccatcgacctctccatccccagcaagcggcagcggagggaggcggggcctgacatgacg
gacatcaagacagagcagagcggcggcttggagcagacgtacgcccttgctttgtccaag
gacgagaaggcgttgggggggctgcacccccacccccagctgggctgctatcagctcccg
ccgggttccacgccaccccccgccccgcttgccggcccaccccgtgcccagcgcctcaaa
ccgctgctgcctaaacccacctccaccgcatccccgccctccctgaaggagctgcccccg
ctggcgtccatcgctcagatcatcagctccgtctccacggcgcaggacctgctgaagagg
gaggcggcctctctggacggaaaaacccatctgcccgccgcctctttaaacccccccgta
gacgccgccggagctgcagccgctcagagcgaggaggcgcccgactgcagaaggcggtcc
aagaagaagccagcctcggtgggggggaaggagaagcccggcgccatcgacctggagtcc
agcggcgagttcgccagcgtggagaagatgctggccaccaccgacgccaacaagttcagc
cccttcctgaagaccggagcgggagacctgtctggaaagaaagactcggacaggacggca
ggaggaggagaggaggaggccggagcagcagaggaggtgaagcctgcagctccgcagtcc
aaagggaagaagaacgcctactccaactctgtccagaagatgacctgccccttctgccca
cgcgtcttcccctgggccagctcgctgcagcgccacatgttgacgcacaccggtcagaaa
ccgtttccatgtccgcgctgtgacgcgttcttctccaccaagtccaattgtgagcgccac
ctgctgcgcaaacacggcgtgacccacaggacgctgcggcgcaacggcatcatcgagaag
aaggacggagacgagggctcgcacgagagcgcagagagccagtcggagacggaacaggtg
gcaccagatgcacagcaacaagtcaatgtggccgccaacccagtccccgcccccaccgtg
gaaaacccctccccccacgaaagcacacaactaagccccgcccacaaatctaaccaagac
tgcagcctgactgcagagcagccgcaggaggaaacccccgagcagcacgaccagcaggag
gcgcaagagcccccagctgctcctgcaaagcagcatccacagagtggaaaggtggaaagc
accgatgatgaagactgtcacagcaacaagagtctggacctaaactttggcaaaaagctc
atcgactttaagctcaccacctcgtcctcaggctccgcccctcaggacgaacagcccacc
tcctcctctgcaccctctgcctcggccacgcccgagccgacggagagccccgaggagaag
gagaaaccgtcggccggcagcccctctctgaggtcggactcaaaacacgtctgccacgtc
tgcaagaagagcttccgctaccccaccaccctcgctcgccacgagagagcacacatctct
gaggagacgccctcagacgaagccccgcccacccagacggaggagccaacagagagcaaa
gctgctgacgaggagacagaagacaaagagctggagatggaggaaggagggaagggagga
gacagcgaaggaggagagagcggagagtcggaggaggagaaggagaaggaggagaggagc
gacgaggaggcatcagaaccaaagagcgccgagggaggggaggcggcgggggggcgcgtc
gacaagaggaagaagatctgcagcgtgtgcgggaaaaggttctggtccctgcaggacctg
acccggcacatgaggtcgcacacaggggagcggccgtacaagtgtcagacctgcgagagg
accttcacgctgaagcacagcctggtccggcaccagaggatccaccagaagctgcgcggc
gcagacggatcctccgtcgccaacgactacgccagcgaggacggggactcctgcaccccc
acccccacctccacctgccccccctcagagaacgagagcgagtgcggcagcaccatcgtc
ggggccaaggagctggaggaggaggacgctgcgaaggaggacggcgagggtcagcgggag
gatccgcccgccaccgaggccgacgttcccgccgagcagcccgactcggaacctgaggag
ccggactctgcagcgccctccgctgaccagactgagcaagctactgaatcaaagacgagc
atcgacgcccaaccaacaccccccaaagatctccccccagctggagacgccgccaccggc
cccagcacgcaaggcttcatccaggggctgctggagatccacagcaagccccccctggag
cacatagttcccaacggaaagcctcctctggtgggggtagactga
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integrated database retrieval system
