Oryzias melastigma (Indian medaka): 112151122
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Entry
112151122 CDS
T07439
Name
(RefSeq) phthiocerol synthesis polyketide synthase type I PpsD isoform X3
Organism
oml
Oryzias melastigma (Indian medaka)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
adh_short
CurL-like_PKS_C
PKS_DH_N
PP-binding
Thiolase_N
adh_short_C2
ADH_N
ACP_SdgA_C
RhiE-like_linker
Motif
Other DBs
NCBI-GeneID:
112151122
NCBI-ProteinID:
XP_024135583
Ensembl:
ENSOMEG00000001328
UniProt:
A0A3B3CVZ0
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Position
LG20:22577035..22593681
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AA seq
2084 aa
AA seq
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MEEEDSIAVVGMGCNFPGGEGLENFWKVLEGGRNCSATVPKSRFDLASWHDPDATKVGKS
CTEKAALVDGFNDFDNKLFDISDIEAKQMDPQQKQLLQCVYRALEDAGLPMEKASGTRTG
VFIGIMNRDYESNGGNIHPSLINHFTGTGLAMSIAANRVSYCFNFTGPSLTLDTACSSSL
VALHLACQSIRQGDCEMAVCGGVNFITEPRVFVVLSRAKMISPEGTSKPFSSRADGYGRG
EGCGVVLLKPLKKALEDHDNIWGIISKTAVNQDGRTVSPITRPSMTQQEELLRKIYSHSD
IANVQYVEAHGTGTPVGDPTEAQSISNVIAKARPCGSEALWIGSVKGNIGHTESAAGIAG
AMKVMLMMKHETIVPSVFHSDENCSVDTKSLKIKIPNKTEPWESSRARVAGVNNFGFGGT
NAHAIIKQHIPCNFKKKCDERLTKYFVLSASSPKSLTMMTEDTIRHLDAHAEVDLDSLLY
TSACRRSHQKHKYRKAIVTSSIADLKEKLCASVDQNVRPALSDPRLVFVYCGNGVNYHGM
CKQLLKSEPIFRECIKEISQLFQIHSSLNILNTLESDFERNDFQNPDVVQPLLFAIQVGI
TTLLRCWGVKPNAVLGHSVGEVAAAHCSGLLSLEEAVKVIYIRSSMQSKVTGGKMLVISN
MAVSEVSSLLTKYAGRVSLAAFNSPQSCTLSGDADAIESIHGELRASDSRNTLFLRVLDV
PSAYHSHMMDSILPDIRETIGPLQASVPETELYSTVTGKEVQQGDFCTGEYWARNIRDPV
VFEEALKVAQKENRNTVFLEVGPRKALQRNIMETLGDNTAVVASVEPQREQESTISVLSK
LFELGVAVDWNSFYRGHETIPLPFPKYHFDCSDRDVIIAAAKNNKGSSHPVLCQTGSEDN
LFICDLTSDTTFYLKEHKHADVPIVPGAFYVDLGLAAFLAISRPKVPLSSLQISVSFHKP
CVLTQNYPEIKVQLTQKENETSFTVFSSSAEYASGSVVSKLEDLIEEPWISLSSIRKRCT
SVLNFQQFYSYLSEQGFQYGEVFQNKGDVYYGKDLMEAFAAVSIPEELLPHLHECCIHPV
VLDYLIQLLPLTVKHITTDRVGFPAKVGSLTVFQPLQKDMIIYLRATHVGMDHFEVCGCF
ADMEGRVLVEAKDVMFKDLSNVNIEEYFYHNSFSVVLESSTTSPPPKALVFSDVLGISDD
LKQHLDQGSRYVSFTHANHIVNHGFSSLLTNLNITDIEKNFDEALFLWYTEDLPSLKFDV
LSQILANCCDVFRQIIVELRKIKFSKAIRVVTYSSSDITVDRISPGFVFAGLTRSFAAEM
SDLSFQLVDMEKISPENITALSEVLRQYPCNDFPELVVKDGKIFKPTIIHSPLDVTDRAE
GSCISANSKPFILETNDGKRISQLSALQFDKDPGPICNTFVEIKLSKVCVHSSDYFPVSD
SHLKSGQTLYWNKHSSQKHKLLALDYSGIIKAVGKDVTTLKVGDHIASCYPIVAADKVRV
PESVCYSTETLPFLRETPCVSFLVLSWHILRPVLSISKQNLGILCSEPHAALVDVLTHTS
TKLGCNVIVSTHCEDFFDIQLDALVIVPPFDETMTAKIADLSGLQVVVLLCESQVKGVLV
QDVFQSVKDGVYVQTVQMQEVLQKGNLSAHGPHVLQWLKSLSLEKKCAPEMNPFQNVKSE
AASTCSEGSASYFSSKKLAVVSLQDNVDGNTSDIPVLPTKKQFFTKGAVYIVTGGLSGLG
FETVRFISQRGGGNVVSLSRSKPSAEVQQEMCALEKEHENCIISMQCDVSVFEDVHKVII
AIGQKFPGCPIRGVFHSAVVLHDGIIEALNTSLYEKVFKPKVNGVLNLHRATQHCPLDYF
VCYSSISAFLGNPSQSNYAAANSFLDMFCHYRRQLGLPGQSISWGALKLGLLDNKEHLQH
ILEVYGIMGLELAEIRKSLEQCLKLNRAQQAVCRFNFKNISYNVFSHNSSLTKRLYALVE
EAIRKSRQGFFQTKKANSIPPREYITTLLSETFGLDKSEMTDESFLSALGMDSMQAMTVQ
NLILQERRVNLPLVKLLDPAATLSTLVATLTESEMVRNVASSSP
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggacagcatcgctgtggttggaatgggatgcaactttcctggaggagaa
gggctggagaacttctggaaggttctggagggcggcagaaactgctcggccacagttccc
aaaagcagatttgacttggcgagctggcatgaccctgatgccaccaaagtgggcaaatcc
tgcacagagaaggcagccctggttgacgggtttaatgatttcgacaacaaactctttgac
atcagtgatattgaggcgaaacaaatggaccctcaacaaaaacaactccttcagtgcgtc
tacagggcattggaagatgctggtcttccaatggagaaagccagcgggacccgaacagga
gtattcattggcatcatgaacagagattatgaaagcaatgggggaaatatccacccaagt
ctgataaaccacttcacagggacagggctggccatgagcatcgctgcaaacagagtatcc
tactgctttaatttcaccggcccgtctctgaccttagacactgcctgctcatcttcgctt
gtggctcttcatctggcttgtcagtccattagacaaggtgactgtgaaatggctgtttgt
ggaggagtgaacttcatcacggagccaagggtgtttgtggtgctcagtagagccaaaatg
atctcccctgaagggaccagcaagcctttttccagccgagcggatggctacggcagaggg
gagggctgtggggtcgttctcctgaaacccctgaaaaaggctctagaggaccatgacaac
atatggggcatcatcagcaaaactgcagtcaaccaagatggacgtacagtctccccaatc
accagaccctccatgacacagcaagaagaactgctgcgtaaaatctactcacactctgac
attgctaatgtccagtatgtggaggctcatggaactgggacaccagttggagacccaaca
gaggcgcaaagcatatctaatgtgattgctaaagccagaccttgtggttcggaagctctg
tggattgggtctgtgaaagggaacattggacacacagagtctgcagctggaatagctggg
gccatgaaggtcatgctaatgatgaagcacgaaaccattgttccttctgtttttcactct
gatgagaattgcagtgttgataccaaatccttgaagattaaaattcccaacaaaacagag
ccatgggaatcttccagggcaagagttgcaggtgtgaacaactttggctttggtggaaca
aatgcacatgcaattatcaagcaacacatcccgtgcaattttaagaaaaagtgtgacgaa
agacttacaaaatactttgtcttgtcagccagttctccaaagtctcttacaatgatgact
gaggacactattagacatcttgatgcccacgcagaagttgatctagattctctgttgtac
acatcagcttgcagacgaagccaccaaaaacacaaatacagaaaggccattgtgacatca
tccattgctgacctgaaggaaaagttgtgtgccagtgtagaccaaaatgtcagaccagcc
ctatcagatccaagactggtgtttgtgtactgtggaaatggtgtcaactaccatggcatg
tgcaagcagcttttgaaaagtgagccaatattcagagagtgcatcaaagagatatctcaa
cttttccagatccacagctctctgaacattctgaacacacttgagagtgattttgaaaga
aatgactttcaaaacccagatgttgttcaaccactactttttgctatccaggttggcatc
accaccttgctcaggtgttggggggtcaagcctaacgctgtgcttggacactctgtgggt
gaagttgcagctgctcactgctctggactcttgtctctagaggaagccgtaaaggtcatt
tacattcgcagctcaatgcagagcaaagtcactggggggaagatgcttgtgatcagcaac
atggcggtctcagaggtaagctccttactcaccaagtacgctgggagagtaagtctcgct
gctttcaacagcccacagtcctgcaccctttcaggtgatgcagatgcaattgaaagcatc
catggggagctacgcgcctcagatagcagaaacactctattccttcgtgttctagatgtc
ccttctgcttaccacagccacatgatggattcaatcctgcctgatatcagggaaacaatt
ggtcccctccaagctagtgtccctgagacagagctgtactcaacagttacagggaaagaa
gtacagcagggagacttctgcactggtgaatactgggctagaaacattcgtgaccctgtt
gtttttgaggaggcattaaaggtggcacagaaagaaaacagaaacacagtctttctagag
gtaggaccaagaaaggcacttcagagaaacatcatggaaactctgggggacaacacagct
gttgtagcttcagtggaaccacaaagagaacaggaatcaaccatttctgtgttgtctaaa
ctgtttgaactaggtgttgcagtagattggaacagtttttacagaggccatgagacaata
ccgctgccattcccaaagtatcactttgactgttcagacagagatgttatcattgcagca
gcaaagaataacaaaggcagctctcaccccgtgctttgtcagacaggaagtgaagataac
cttttcatctgtgacctcacatctgatactactttctacttgaaagagcacaagcacgcg
gatgttcccatagttcctggtgcattctatgtcgacttgggtttggctgcatttttggca
atctctagaccaaaggtacccctcagctcactgcagatcagtgtcagctttcacaagcca
tgtgtattaacacaaaattatccagaaataaaggtccaactgactcaaaaggagaatgaa
accagcttcactgttttctcctcgtccgcagagtatgcttcaggctcagtggtttcaaaa
ctagaagacctgattgaagagccgtggatttcactcagctctatccgcaaacgatgcaca
tctgtgctgaactttcaacagttttattcctatctgtctgagcaaggcttccagtatgga
gaggtctttcagaataagggagatgtttactatgggaaggatctgatggaagcttttgca
gctgtatcaattcctgaggagctactgcctcatttgcatgagtgctgcattcatcctgtt
gtgttggattatctgattcagcttctccctcttacggtgaagcacatcacaactgacaga
gttggatttcctgccaaagtaggaagtctgacagtgtttcaacccttacaaaaggacatg
atcatctatctgcgggcaactcatgtgggaatggaccactttgaggtttgtggatgcttt
gctgacatggaaggaagagtgctggtagaggctaaagatgtgatgttcaaggacctcagt
aacgtgaacattgaagagtacttttaccacaattctttcagtgtcgtcctagaaagttct
actacttctcctcctccaaaggctttggtcttttcagatgtattagggatctcagatgat
ctgaaacaacatttggaccaaggatctagatatgtttccttcacacatgccaaccacatc
gtaaatcatggattttcttcacttttgacaaatctcaatatcacagatattgagaaaaac
tttgatgaggcattgttcctatggtacacagaagacctcccatcattgaaatttgatgtc
ctttcgcaaattctggcgaattgctgtgatgtttttcgccaaataattgttgagctgagg
aagattaaattctccaaagcaatcagagtggtgacttacagttcatctgacatcactgta
gatcgcataagtccaggttttgtttttgctggtttgaccagatcctttgctgcagagatg
tcagatctttcctttcaactcgtcgacatggaaaagatttccccagagaacattactgct
ctctctgaggtcctaagacaatatccttgcaacgacttcccagagttggtggtaaaagat
gggaaaatcttcaaacctaccattatccactctcctctagatgtcactgacagagcagag
ggaagttgcatctctgcaaattcaaagcctttcattctcgagacgaatgatggcaaaaga
atcagtcagctaagtgctcttcagttcgacaaggatcctggaccaatctgcaacactttt
gttgaaatcaagctcagtaaagtatgtgttcattcatctgattactttcccgtcagtgac
tcacatttgaaaagtggccagactctctactggaacaagcactcatctcaaaaacacaag
ctgctggcccttgactatagtggcatcatcaaggcagttggcaaagatgtaacaacactt
aaagtgggggatcacattgcctcttgctatcccattgtggcagctgataaggtcagagtt
cctgagtctgtttgctacagcactgagactctcccatttctgcgtgagacaccatgtgtt
tcattccttgtgctttcatggcacatcctccgtccagtcttgagcatatcgaaacagaat
ctggggatcttgtgctcagaaccacatgctgctcttgtggatgtcttgacacatacctct
accaaactgggctgcaatgtaattgtcagcacacattgtgaagacttttttgacattcag
ttagatgcacttgtcattgtgccaccttttgatgaaaccatgactgctaaaatagctgat
ctctccggacttcaagttgttgttcttctctgtgaatctcaagttaagggtgttttggtt
caggatgttttccaaagtgtaaaagacggtgtttatgtgcagacagttcagatgcaagaa
gttttgcaaaaaggaaacctgagtgcacacgggccgcacgttcttcagtggctcaagtcc
ctcagcttagagaagaagtgtgctcctgaaatgaacccttttcaaaatgtcaagtctgaa
gccgcaagtacctgttcagagggatctgcctcctacttcagctcaaagaaactggctgtg
gtgtctctgcaggacaatgtagacggaaacacctctgacatcccagtgctgccaacaaag
aagcagtttttcacaaagggagcagtttacattgtgaccggtggtctctctggtctaggc
tttgaaacagtcagatttatttcccagagaggggggggcaatgttgtcagcctgtccagg
agcaagccttcagcagaggtccagcaggaaatgtgtgctctggagaaggagcatgaaaac
tgcatcattagcatgcagtgtgatgtttcagtctttgaagatgtgcataaggtgatcatc
gccattggacagaagttccctggctgtcctatcagaggagtgtttcacagtgcagttgtt
ctgcatgatgggatcattgaggctctgaacacatctctttatgagaaggttttcaaacct
aaagtgaatggggtgttgaatttacaccgtgccacacagcactgtccactggactacttt
gtgtgttactcctccatttctgctttcttgggaaacccatcacaatcaaactatgcagct
gccaactctttccttgacatgttctgccattacaggcgtcaacttgggctgccgggacag
tccatcagctggggggcactgaaattgggactgcttgacaataaggagcatttgcagcac
attttggaagtttatggcatcatggggcttgaactagctgaaattcgaaaaagtttagag
cagtgcctcaaactcaaccgagcccagcaggctgtttgcaggtttaacttcaaaaacatc
agctataacgtcttctctcacaatagctccttgaccaagcggctgtacgcattagtcgag
gaagctattcggaaatccagacagggatttttccagacaaagaaagccaactcaatccca
ccaagagagtacatcacaactctgctcagtgagacttttggcttggacaagagtgagatg
acagatgagtcttttctttcagccttaggcatggactccatgcaggcaatgactgtacaa
aacctaatcctgcaggagagaagagtcaatctccccttggtgaaacttttggatcctgct
gccacactctcaactctggtggctactctaacggagtcagaaatggtcagaaatgtagct
tcaagcagtccttaa
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