Oryzias melastigma (Indian medaka): 112151162
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Entry
112151162 CDS
T07439
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
112151162 (zcchc2)
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GFIT
Motif
Pfam:
PHAT_SMAUG
Vts1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
112151162
NCBI-ProteinID:
XP_024135642
Ensembl:
ENSOMEG00000001146
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Position
LG20:20913046..20932605
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AA seq
1137 aa
AA seq
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MLKMKLPMRTGEEGGDETPEDDSLDPSEPRHAPTTTPSSLVYERLQEPPGPGIHATQLDK
ETVFEWFGLHSNPAKRIEFMCGLLHMCQPLELRFLGSYLEDLGRKDYHVLRDYECRANTP
GEVGMLTNVLDPVVRSKLLVFLSLLGSDNRECAGILSRVLSNVDLALFYRNYDYSLPPFR
DPLPQAFYPPYREGTAFGQPEKPCELPASDTAAEALEQLALLFTMASLHPAFHFHQKEVV
RGLLEKTELLLEGERRQRQLRINAQTPTTPKSHNGGIKEPHVAPEPQVADPWVGQQEDYM
PSVQGLGECTASHAACQTRRPSRWAAQREAVHIEGIVLRSVSRTGADKEYNFEVKWSDSS
SSRVTKTHHELENFLLKLPKDQTTESFEKSILRLLNQGDQYESREVENNLRERFLSAPPL
FRQTRKVCSFFTCDSAHSSKPACSICHCQPNNAYHQDCSDASSQEEESYVQGPKKKHGSR
SPCPLFPSAKGPTVDTRRGGHAVEVNGPAEWRKKSCSPRGGPEKEQHRESEKRIHAVAKM
KSRVQPADREKGGSKGKGGGFVTVTNLAAARSPQRKGGVSIPDTCGDTSSESYSSPSSPQ
HRGAESLDSEDDNNKDTDSHSDDGRKGGTAAMYFTDPAVVEGVRCLSSNNLKPQMETLCS
DAGAEFPPLSFINPIPCVLPNGAADSAIPVVSPPAQNLVPDGKALGGMMVQMSLGPPPVP
GPGATGDPEKREVLPPFGIPPFGLHPPANLGVQPLVQRFKTALPQSPACPEGAPESSPAG
PHPPPVRAMRVMSPGPTSYSSPLLSCQDPVNVSPGLAALPHVDSSPAKHHGLSLPSGMPP
AYSLPLVPNSVLPSVGAPMVPGVAPPGPALTQSPGPARSHSPSLVHSSTQSDGPSHSSSS
ASCGTAPAATGSPLTLQQSQPLPPQQPTPPQQQQPPGGCGTCGCHNNCGSRGGASAASGC
QAPLYFPGHQMAARHVFSVPPSLFQLTNLCSNSYLTQPPPSHQANGAATLPPFFTTGPPP
ASPYLQTHSHSDMLGSQAAAMAAAANYNLQQQLAPAASFCQRVYQHIYPSPLGMLPMAAL
AGGGVNKKNGSVSCFNCGVSGHYAQDCNQPSMDSSQQGGFRLKYPGSHVSEALDNAD
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatgaagctaccgatgagaacgggcgaggaagggggcgacgagacgcctgag
gacgactctttggatccatcggagccccgacacgctcccacgacgacaccttcctccctg
gtctacgagagactgcaggagcccccggggccgggtatccacgcaacgcaactggacaaa
gagaccgttttcgagtggttcggcctacattcaaaccccgctaagcggatcgagttcatg
tgcgggctgctacatatgtgtcaacccttggaactccggtttttgggatcttatttagag
gatcttggtaggaaggactaccacgttttaagagattacgagtgtcgagcgaacaccccg
ggcgaggtggggatgctgacaaatgtgttggacccggtggtgcggtccaaactcttggtc
ttcctctcgctgctcgggtctgacaacagggaatgtgctggaatactctcccgggtgctg
agcaatgtggacctggccctgttctacagaaactatgactactccctccctccgttcagg
gaccctctcccgcaggctttctaccctccgtatcgggaggggaccgcgttcgggcagccg
gagaagccctgcgagctccccgccagcgacaccgcggcggaggcgctggaacagctggcg
ctgctcttcaccatggcctcgcttcacccagccttccatttccaccaaaaggaagttgtc
cgcgggctgctggagaaaaccgagctgttgctggagggggagaggcggcagaggcagctc
agaataaacgcccagacgccgacgacgccaaagagccacaatggagggataaaagagcct
catgtggctccggagcctcaggttgcagacccctgggtgggtcagcaggaggactacatg
ccctcggtgcagggtctgggagagtgcacagcctcccacgctgcttgtcagacccgacgg
cccagccggtgggcagcacaaagagaagcagttcatatcgaagggattgtgctcaggagc
gtctcccggaccggagccgacaaggaatacaacttcgaggtgaagtggtctgactcctcc
tccagtcgtgtgaccaaaacccaccatgaactcgagaacttccttcttaagcttccaaag
gatcagaccacagagtcttttgagaagagcattctgagacttctgaaccaaggggaccag
tatgagagcagggaggtggagaacaacctcagggaacggtttctgtcggctcctccgctc
ttcagacagaccaggaaggtctgcagcttcttcacctgtgattcagctcactcctccaaa
cccgcttgttccatatgccactgccagccaaataacgcctaccatcaagactgctcggac
gcctccagtcaggaggaagagtcttacgttcagggacccaagaaaaagcacggatccagg
agtccatgtcctctctttcccagtgccaaaggccccacagtggacactcggagggggggc
cacgccgtggaggttaacggtcctgcagaatggaggaagaagagctgttcaccccggggt
ggcccggagaaagagcagcatcgtgagtctgagaagagaatccacgccgtcgctaagatg
aagagcagagtccagcctgcagacagggaaaagggtggatcgaagggaaaagggggcggc
ttcgttaccgtgactaacctggcagcggcgcggtcccctcagaggaaagggggcgtgtct
attcctgacacctgcggcgacacgtcgtcggagagctacagctccccctccagcccccag
caccgcggcgccgagagcctggacagcgaggatgacaacaacaaagacacagacagccac
tctgacgatggcaggaaggggggcactgccgccatgtacttcacagacccggctgtggtg
gagggggtccgctgtctgtcttccaacaacctgaagcctcagatggagactctctgctcc
gacgccggcgccgagttcccccccctgtccttcatcaaccctattccctgcgttcttccc
aacggagccgccgactcagccatccccgtggtctcccccccggcccagaacctggttcct
gacgggaaggccctgggggggatgatggtgcagatgtctttaggacctccacctgtccca
ggcccgggcgccaccggggaccccgagaagagggaggtgctgcccccctttgggatcccc
ccatttgggctccaccccccggctaacctgggggtgcagccgctggttcagaggttcaaa
accgccctgccccagagccccgcctgccctgagggggcgccggagtccagccccgcaggc
ccacacccgccccccgtcagagccatgagagtcatgtcccccgggcccacctcctactcc
tcccccctgctgtcctgccaagacccggtcaacgtcagtccggggctggccgctctgccg
catgtggactcctcccccgccaagcaccacggcctgagccttccctcgggcatgcctccc
gcctacagcctccccctggtgcccaactctgttctgccctccgtcggagcccccatggtg
ccgggggtggccccccctggacccgccctcacacagagcccgggccccgcccgcagccac
agcccctccctcgttcacagctccacgcagagcgacggcccctcccacagcagcagcagc
gcttcctgtggcaccgcccccgccgccacgggcagccccctcaccctccagcagagccaa
ccgctgccccctcagcagcccacacccccccagcagcagcagccgccagggggctgtgga
acgtgcggctgccacaacaactgcggcagccgcggcggcgcgagcgccgcctctggctgc
caggctcctctgtacttccccggccaccagatggcggcgcgccacgtcttcagcgttccg
ccgtctctcttccagctcaccaacctgtgcagcaacagctacctcacccagcccccccca
tcccaccaggccaacggcgccgccaccctgccgccgtttttcaccacgggtccgccccca
gcgtccccctaccttcagactcacagccactcggacatgcttggcagtcaggcggcggcg
atggcggccgccgccaactacaacctgcagcagcagctggctccagcggcgtccttctgc
cagagagtctaccagcacatttaccccagtcctctggggatgctgcccatggccgctctg
gcagggggcggagtcaacaagaagaacggcagcgtttcgtgcttcaactgcggcgtgagc
ggccactacgctcaggactgcaaccagccttccatggactccagccagcaaggtggtttc
cggctgaagtacccgggctcccacgtttcagaagcacttgacaacgccgactaa
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