Oryzias melastigma (Indian medaka): 112151244
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Entry
112151244 CDS
T07439
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112151244 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112151244 (nup58)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112151244 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Siah-Interact_N
FapA
Nup49_C
PSY3
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
112151244
NCBI-ProteinID:
XP_024135807
Ensembl:
ENSOMEG00000014681
UniProt:
A0A3B3DJZ1
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Position
LG20:13458079..13468792
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AA seq
604 aa
AA seq
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MSGFNFGSGTLGATNTGGGFSFGGATSAPAASTGGFSFGTVLGTPAATPASTTTTTASLG
LGGNPFGQKPTGGFSFNTPTSSAAAPTTGLTLGGAPASTAATTGFSLGFSKPTASATPFS
LTTTTTTTSSTVGAGLSFGSILSAQQQQQQQQQPTATSFSLGLGGSTASAVATTVPPLGG
SLFSSSLSTGLGQTTLGAGGGLTLGSLLGTSTAASTAPAPSIGLGGVDFSTSSENKSDTL
SGSNEQDSKALKDENLPPVICQDVENFQKCVKEQKQVQEEISRMSSKAISKVQDDIKNLK
QLLSVSASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVE
QFEVQLQQYRQQIEELENHLTTQGSGSHITPQDLTMAMQKLYQTFVAQAAQLQSVHENVK
ILKQQYLSYRRAFLEDSTDIFETKRASNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLT
QQQQPTPGTQAPLGAGFGNPFASAVGTSLGSSTLGGFAGGPGFGGVGCAGSSFGFSTAAK
PTGGSLSAGFGSTSNSGFNFSNPGINPSAGLTFGVSNQPAAGFGAAGPLLQLKKPPAGNK
RGKR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttaatttcggctcggggaccctcggcgcgaccaacacaggtggaggattt
tcattcggaggggcaaccagtgcacctgcggctagtactggcggcttttcttttgggact
gttctgggaacgccagctgcaacccctgcttccaccaccaccaccacagcatcccttggt
ttaggaggaaatccttttggccaaaaaccaacaggaggattttcttttaatacacctacc
tcaagtgctgctgcacccacaacaggccttacattaggtggtgccccagcttctacagct
gccactactggctttagtttaggcttcagcaagcccactgcctcagcaacgcctttctcc
ctcaccaccaccacaacaaccacctcctcaaccgttggagcaggtttatcattcggctcc
attctaagcgctcagcagcagcagcagcagcagcagcagcctacagccacaagcttctcc
cttgggcttggtggctcaacagcttccgcagtagccacaacagtgccaccactaggggga
agtttgttctccagttctttatctacaggtttgggacaaaccactcttggagctggtggt
gggctaacattaggttctttgctgggaacctcaacagcagcatcaactgccccagctcct
agtattggtctaggtggggttgatttcagcacttcctccgagaataagagcgacacattg
tctggatccaatgaacaggacagcaaagctttaaaagatgagaatctgcccccagttatt
tgtcaggatgttgaaaactttcaaaaatgtgtcaaagagcagaaacaggtgcaggaagag
atcagcaggatgtcatcaaaagctatttctaaagtccaagatgacatcaagaacctcaaa
cagcttctctctgtcagtgcaagcggtctgcagcgccaagctctggctatcgacaagtta
aaactggaaacagctcaggagctgaaaaatgctgacatagcactgcgtacacagaagacc
ccccctggacttcagcatgaaaatacagctccatcagattatttccgtagccttgtggag
cagtttgaagtgcagctgcaacagtaccggcagcaaattgaagagctggaaaatcacctg
acgacacagggcagcggctcccacatcacgcctcaagatttgacgatggccatgcagaag
ttataccaaacatttgtcgcacaggctgctcagcttcaatctgtccatgaaaacgtcaag
attttgaagcagcagtatctttcctaccgccgagcctttctggaagactccacagacatc
ttcgagacaaagcgcgcgtccaacaggaaatggcagagcgcaccgcgagtcacgaccggg
cctgcccccttctccagtgtccccaacgctgcagctgttgccatggcagccacgttgacc
cagcaacagcagccaactccagggacacaggcacccttgggggcaggatttggaaatcct
tttgcctcagcagtgggcactagcctgggctcttccacccttggaggatttgctggtgga
ccaggattcggcggcgtgggttgcgcagggtcgtcttttggcttctccactgctgctaag
cccacagggggcagtctgagtgcaggttttggcagcaccagcaattcgggctttaacttc
agcaaccccggcatcaacccatctgccggcctgaccttcggcgtgtccaaccagccagcg
gcgggcttcggagcggcagggccacttctccagctgaaaaagcctccggccggtaacaaa
agaggcaagagatag
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