Oryzias melastigma (Indian medaka): 112151265
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Entry
112151265 CDS
T07439
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112151265 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112151265 (asap1b)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112151265 (asap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
BAR
SH3_9
SH3_1
Ank_4
Ank_3
SH3_2
Ank_5
DUF4404
Motif
Other DBs
NCBI-GeneID:
112151265
NCBI-ProteinID:
XP_024135839
Ensembl:
ENSOMEG00000001852
LinkDB
All DBs
Position
LG20:5504318..5581878
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AA seq
1127 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVNVLEEALDQDRTSLQKVKKSVKA
IYNSGQDHVQNEENYAQALDKFGSNFISRDNPDLGTAFVKFSSLTKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKESRRDSQSKQGGYSMHQL
QGNKEFGSEKKGYLMKKSDGLRKVWQRRQCSVKGGILTISHATSNRQPVKLNLLTCQVKP
SGEDRKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNMAFRGEQSSGGEDGLED
LTKAIIEEVLRMPGNELCCDCGAADPKWLSTNLGILTCIECSGIHREMGVHISRIQSMEL
DKLGTSELLLAKNVGNSSFNEIMEGNLPHPSPKPTPSSDMTVRKEFITAKYVDHKYAKKT
CTSASAKMIELFEAVQSRDLLALIQVYAEGVELMEPLPETGPEAGETALHYSVRTADHTS
LHLVDFLVQNSGNLDKQTEYGNTALHYCCMYEKPECLKLLLRGKPATDITNQNGETALDV
ARRLRNSQCEEALVQAAEGKFNPHIHVEYEWSLRLEEMDESDDDLDDKPSPIKKDRSPRP
QSFCHSSSLSPHDKLSLPGFISQRDKQQRLSYSAFTNQMYSASTDLSSSPVADGPPLPPR
NQGKAPPPSGPHSTLTTGGSSTLSKKRPPPPPPGHKRTLSDPPSPLCHTPLSRGGLSGGS
DSTPPPVSKMSPVSNKFEGIPQQQSTTSSNTKSTLGPRVLPKLPQKVALRKIDTIHHPSV
DKSSLPPEVFQKSPPADPQKAPLAERPQLGDLPPKPQASDLPPKPGELPPKPQLSDLPPK
PQLGDLPPKPQLKDLPPKPHLADIPPKPGPTEPSPRPPPGEPTTPRPQTQPPPPPHQQPQ
DSPSPNQQANVGILPQQAAEDANGTSPGTTEMPVPLPRKINTGKNKVRRVKTIYDCQADN
DDELTFVEGEVIIVTGEEDQEWWIGHIEGNPDRKGVFPMSFVHILSD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcaaatctcggtgtccgagttcctctcggaaacgacagaggattacaactcc
ccgaccacatccagcttcaccacccggctgcagagctgcaggaacaccgtcaacgtgctg
gaggaggctcttgaccaggaccgaacgtcccttcagaaggtgaagaagtcagtgaaggcg
atctacaactcgggtcaagatcacgtccagaatgaggaaaactacgcccaagctctggac
aaatttggtagcaacttcatcagccgggacaaccccgacctgggcacagctttcgtcaag
ttctcctccctcaccaaggagctgtcggcgctgctgaagaacctgctccagagtctgagc
cataatgtgatcttcactctggactcgctcctgaagggagatttgaaaggcgtgaagggg
gacataaagaagccctttgacaaagcgtggaaagactacgaggccaagttcacaaagatc
gagaaggagaagcgggagcacgccaagcagcacgggatgatccgaaccgaaatcaccggc
gctgagatcgccgaggagatggaaaaggaacgccgcctgtttcaactccagatgtgtgag
tacctgatcaaagtaaatgagatcaagaccaagaaaggagtggacctcctgcagaacctg
attaagtattaccatgcacagtgcaatttcttccaggacggcttgaagacggcagacaag
ctgaagcagtacattgagaagctggcagctgatctctacaatatcaaacagactcaggat
gaggagaagaagcagctgaccgccctgcgagacctgatcaagtcctccctccagctggac
cagaaggagtctagaagagactcgcagagcaagcagggcggctacagcatgcaccagctg
caggggaacaaggagttcggcagcgagaagaaaggctacctgatgaagaagagcgacggg
ctgaggaaggtgtggcagaggaggcagtgctcggtgaaggggggcatcctgaccatctcc
cacgccacgtccaacaggcaacccgtcaaactcaacctgctcacctgccaggtgaagccg
agcggcgaggacaggaaatgttttgatctcatctctcataaccggacatatcacttccag
gctgaagatgaacaagagtttgtcatttggatctcggtgctgaccaacagcaaggaggag
gcgctaaacatggcgttccgaggcgagcagagcagcggcggcgaggacggactggaggac
ttgactaaagccatcatcgaagaagtgctgcgcatgccgggcaacgagctgtgctgcgac
tgcggagctgcagaccccaagtggctctccaccaacctgggcatcctcacctgcatcgag
tgctcgggcatccacagggagatgggggtgcacatttcccgaatccagtccatggagctc
gacaagttagggacctcagaactcttgctggccaagaacgttgggaacagtagcttcaac
gagatcatggagggaaacctcccccatccttccccgaagcccaccccctccagtgacatg
acggtgaggaaggagttcatcaccgccaagtacgtggaccacaagtacgccaagaagacc
tgcacgtccgcgtcggctaagatgatcgagctgttcgaggcggtccagtcccgagacctg
ctggctctgattcaggtctacgcggagggggtggagcttatggagcccctcccagagacg
ggaccagaagccggcgagactgcgctgcactactccgtccggacggcggatcacacctcg
ctgcacctggtggacttcctggtgcagaacagcggtaacctggataagcagacggagtac
gggaacaccgccctgcactactgctgcatgtacgagaagcccgagtgcctcaagttgctg
ctgaggggcaagccggccaccgacatcaccaatcagaacggagagacggctctggatgtt
gccaggcgactgaggaacagtcagtgcgaggaggcgctcgtccaggccgcagaggggaag
ttcaaccctcacatccatgtggagtatgagtggagtctcaggctggaggagatggacgag
agcgacgacgacctcgacgacaagcccagtcccatcaagaaggaccgctccccgaggccg
cagagcttctgccactcctccagcctctccccccacgacaagctctccctgccgggcttc
atcagccagagggacaagcagcagcgcctgtcctacagcgccttcaccaaccagatgtac
agcgcctccaccgacctcagctcctcccccgtggcggacgggccgccgctgccccccagg
aaccagggcaaagctcctcccccatccggccctcactccacactcacgacaggaggcagc
tccaccctgtccaagaagagacctccgccccctcctcctggacacaaacgcaccctgtct
gacccacccagccctctctgtcacactccactcagtagagggggcttatccggggggagc
gactccactcctccgccggtcagtaagatgtctccggtttccaacaagtttgaaggcatt
cctcaacagcaaagcactacttcaagcaacacaaagtccacacttggtccaagggttctt
cccaaactacctcagaaagtggcgttacgtaagatcgacaccatccatcatccgtctgtg
gataagtccagccttcctccagaggtcttccagaagtcccccccagcagacccgcagaag
gctccgctggcagagaggcctcagctgggcgacctgccccccaaaccgcaggcgtctgac
ctgccccccaaacccggagagctccctccaaagccgcagctgtccgacctcccgccgaaa
cctcagctgggagacctgccgccaaagccacagctcaaagacctcccgcccaagccgcac
ctcgccgacatccccccgaaacccggaccgaccgaaccctcccccaggccgcctcccgga
gagcccactacacccaggcctcaaacgcagccgccccctccaccccatcagcagcctcag
gactcgccgtcacccaatcagcaggcaaacgtagggatcttgcctcagcaggccgcagag
gacgccaacgggacgtcgcccggcaccaccgagatgccggtccccctgcccaggaagatc
aacaccggaaagaataaagtgcgtcgggtgaagacgatctacgactgccaggccgacaac
gacgacgagctgacctttgtggaaggagaggtgatcatagtcacgggagaggaggaccag
gagtggtggatcgggcacatcgaaggcaatccggacaggaaaggggtcttccccatgtct
ttcgtgcacatcctgagtgactga
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