Oryzias melastigma (Indian medaka): 112151274
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Entry
112151274 CDS
T07439
Symbol
cngb3.1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112151274 (cngb3.1)
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112151274 (cngb3.1)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112151274
NCBI-ProteinID:
XP_036073420
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Position
LG20:15182567..15196864
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AA seq
773 aa
AA seq
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MFYILVCVQEEKPPEKKDEQAEEKKTDLEKKEEKKKDEVEKEAIKEGKDEEENKKEEPKT
DSPAAPAPTAPAPAAPAAPAPAAPASTAPAPAAPAPTNAANPDGGEGGEEAPPPPVVYFR
YTDDILRGVIKALRERKEILKEKAIDPYATSPEITPPVTPILKKEDYIRIQEERRIVKEE
EDRRKAEEAAKKAEEKKKKDEEKRLEAEKKAEEERLAEEARKKAQILPDISCSCFDVLFH
PVETMMDSFLGTTIDPFTDRRYIAWLTVVAVAYNYNVWFCTARLAFPYHNETANKYWIIC
DIISDIVNIIDIIVWQPRLQFVKGGDIIKDRALTKVHYRKSYRFKTDIISILPLDLLSLQ
FSFSSIYRLNRFIRIDSFFEFSDRLESIMAKAYIWRVARTTGYLLYVLHLNACAFYVASV
SQGLATTSWVYDGKGTAYLRCYYFAVRSLINIGGLPEPVTVFEIIFQMANFFIGVFVFSS
LIGQMRDVIGAATASQTYFRASMDGCVAYMNTYTIPKLVQNRVRTWYNYTWAAQGMLDES
ELLDKMPLVMRTAIAVDINLATFQKIALFQGCDQQMLVDMLLRLKSIIYLPGDFVVKKGD
IGKEMYIIKSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVKAHGFA
NLFVLEKKDLFDILVHYPESQKVLARKGRQLMKAKAPGGAKTKEEKQKGLALFGQKPPTP
KLLKAFGNFRKGGILDKLKVKVFMLEETVNFLYKEDFNFFFSLCQQKNAEEQQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttttatattctcgtttgcgtgcaggaggagaaaccgcctgaaaagaaggatgaacaa
gcagaggagaaaaagacggaccttgagaagaaagaagaaaaaaagaaggatgaagtggaa
aaagaagcaataaaggaaggaaaggatgaagaagagaacaaaaaggaagaacctaaaaca
gactctccagctgcacctgcgcccactgcacctgcgcccgctgcacctgctgcacctgca
cccgctgcacctgcgtccactgcacctgcacctgctgcccctgctccaactaatgctgcc
aatccagatgggggtgaaggcggggaggaagctccgcctccacctgttgtctatttccgc
tatacagacgacatcctcagaggtgtgatcaaagcgttaagagagcgaaaagaaatcctc
aaagagaaagctatagatccctatgccacatctccagaaatcaccccacctgtcactcct
attcttaagaaagaggactacatcagaattcaggaagagcggcggatagtgaaggaagaa
gaggacagaaggaaagcagaggaggcagctaagaaggcagaggagaagaagaagaaagat
gaggagaaacggttggaggctgagaagaaagcggaggaggagaggcttgcagaggaagcc
cgaaagaaggcacaaatccttccagacatcagctgctcctgctttgacgtcctcttccat
cccgtggagacgatgatggactctttcttaggaaccaccattgatcctttcacagatcgt
cgatacatcgcctggctgactgtggtggccgtggcctacaactacaacgtttggttctgc
accgcccggttggcctttccctaccacaacgaaactgccaacaaatactggataatctgt
gacatcatttccgacatcgtgaacatcatcgacatcatcgtttggcagcctcgactccag
ttcgtcaaaggcggagatatcattaaagacagagctttgactaaagtgcattataggaaa
tcatatcgatttaagactgacataatcagcattctcccattagaccttctcagtctgcag
tttagcttctcatccatatacagactcaaccgcttcatcaggatcgattccttctttgag
ttcagcgatcggcttgagagcatcatggcaaaagcgtacatatggagagtggcccgcacc
acaggatacctgctgtatgtgctccatctcaacgcctgtgcgttctatgttgcttccgtg
tctcagggtcttgctaccacctcgtgggtctatgatggaaagggtacagcatatttgcgt
tgctactacttcgccgttcgcagtctcattaacatcggaggtcttccagaaccggtgaca
gtcttcgagatcatcttccagatggccaactttttcatcggcgtctttgtcttctccagt
ctgatcgggcagatgagagacgtgataggagcagccaccgccagtcagacgtatttcaga
gcatcgatggacggatgtgtcgcctacatgaacacttatacaatcccaaagttggtccag
aacagggtcagaacctggtacaactatacctgggctgcacagggtatgctagatgagtct
gagctgctagacaagatgcctctggtgatgagaaccgccatcgccgtggacatcaatctg
gccactttccaaaagatcgcactgtttcagggctgtgaccagcagatgttggtggacatg
ttactgcggctcaagtccatcatctatctgcccggagactttgttgtaaagaagggtgac
atcggtaaagagatgtacatcatcaaaagtggagcggtgcaggtggtgggaggacctgac
aacagcattgtgtttgtcacgctgaaggctggatgcgtgttcggagaaatcagtttgctc
cagtctgccaaagatggaggaaacaggcgcacagccaacgtgaaagcccacggcttcgcc
aacctttttgtcctggagaagaaagacctgtttgacatcctcgtccattacccagagtct
cagaaagttctggctaggaagggcaggcaactgatgaaagccaaagctccaggaggagct
aaaaccaaagaggagaagcagaaaggtttagctctgtttggacagaagccaccgacgccg
aagctgctcaaagctttcggcaacttccgtaaaggaggaatcctggataaacttaaggta
aaagtctttatgcttgaagaaactgtcaattttctttacaaggaagacttcaattttttt
ttttccttgtgtcaacagaaaaatgcagaggagcaacaatag
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