Oryzias melastigma (Indian medaka): 112151275
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Entry
112151275 CDS
T07439
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112151275
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112151275
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF3807
MAP7
CDC45
DDHD
DUF6040
DUF4746
VIR_N
Motif
Other DBs
NCBI-GeneID:
112151275
NCBI-ProteinID:
XP_036073419
Ensembl:
ENSOMEG00000016879
LinkDB
All DBs
Position
LG20:15172557..15182054
Genome browser
AA seq
666 aa
AA seq
DB search
PAPAAAPAAAPAPANPNQAEGQEEAPPPPPPIVINRYSDDQLRSIITKMRERQTIYREKV
IDQYASSPEITPPVTPLLQKEEYAKVIEERTKLAEEERIKKEEADKKKKEEMEKKKKENE
QKKKEEEEKRIEEEKKIKVPFKTKLITAYWSSVDFVLKPLEDRMDSVLGHTIDPFTDRRY
IAWLSMVTLAFNYNTWFVTARLCFPYHTETAIPYWFAMDIVADLIYVTDAILFQPRKQFV
KGGDIIKDRSMTKKHYRDSERCLADVVSILPFDLLYAQFGFKSIFRANRILKVDTFFEFS
DRLESIMAKAYIWRVIRTIGYLLFMLHLNACFYYVASEYQGIGKTKWVYSGLGSAYLRCY
YFAVRSLINIGGLNEPHTVFEISFQMTNFFTGVFVFSSLIGQMRDVIGAATAGQTYFRAS
MDNTVAYMVTNHIPPLVQNRVRTWYTYTWDAQGMLDESELLDKMPLVMRTAIAVDINLAT
FQKIDLFKGCDQQMLVDMLLRLKSIIYLPGDFVVKKGDIGKEMYIIKSGAVQVVGGPDNS
IVFVTLKAGCVFGEISLLQSSKDGGNRRTANVKAYGFANLFVLEKKDLFDILVHYPESQK
VLARKGRKLMKAKGPAAAKAEEDKKKGLALFGQKPQTPKFLRAFGGTINKTLIDKVKVRH
AVIHFP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
ccggcaccagctgcagctccagccgctgccccagctccagcaaaccccaaccaagctgag
ggacaggaagaggcacctcctccgcctccgcccatcgtcatcaacagatattcagacgac
cagctcagatctataatcacaaaaatgagagaaagacagacaatctacagggagaaagtg
attgatcagtatgcctcatcccctgagataacccctcctgtcacgccactgctacagaaa
gaagagtacgccaaagtgatagaggaaaggaccaaactcgcagaggaggagcggataaag
aaggaggaggcagacaaaaagaagaaggaggagatggagaagaaaaagaaggaaaacgag
cagaagaagaaggaggaagaggagaaaaggatagaagaggagaagaaaataaaggtgcct
tttaagacaaagttaatcacagcttactggtcctctgtggactttgtgctgaagccactg
gaggacagaatggactctgtgttgggacacaccatcgatcccttcactgatcgccgctac
atcgcctggttgagcatggtgactctggccttcaattacaacacctggtttgtcaccgcc
cggctgtgttttccatatcacactgagaccgccataccgtactggtttgccatggacatc
gtggctgacctcatctacgtcacagatgccatcttgtttcagcctcgcaaacagtttgtc
aaagggggcgacatcataaaagaccgttccatgactaagaagcactacagagactcggag
cgatgcttggcagatgtggtgtccattctgccgtttgacttgttgtacgcacagtttgga
tttaaatcaattttcagagccaatcgaatactgaaggtggacacattctttgagttcagt
gatcgcttggaaagcatcatggccaaggcttatatctggagagttatccgcaccattggc
tatctcctcttcatgcttcacctcaacgcctgtttctattatgtggcctctgagtatcaa
ggcatcggaaagacaaaatgggtttattctggccttggtagtgcgtatctacgttgttac
tactttgctgtgcgcagtctgatcaacattgggggtctaaatgaaccccacaccgtcttt
gaaatttcctttcagatgactaactttttcacgggggtctttgtgttctccagtttgatc
ggacagatgagagatgtcattggtgcagctacagcaggacagacctactttagagcctcc
atggacaacactgtagcctacatggtgaccaaccacattccccccttggtgcagaaccga
gtccgcacctggtacacatacacatgggatgctcagggcatgctggatgagtcagagtta
ctggataagatgcctctggtcatgagaaccgccatcgctgtggacatcaaccttgccaca
tttcagaagattgaccttttcaagggctgtgaccagcagatgttggtggacatgttactg
cgactcaagtccatcatctacctgcccggagactttgttgtgaaaaaaggtgacatcggt
aaagagatgtacatcatcaaaagtggagcggtgcaggtggtgggaggacctgacaacagc
attgtgtttgtcacgctgaaagctggatgtgtgttcggagaaatcagtttgttacagtct
tccaaagacggaggaaacaggaggacggctaatgtcaaagcttatggttttgctaacctt
tttgtcctggagaagaaagacttgtttgacattcttgtccattacccggagtcccagaag
gtgttagccaggaagggcaggaaactaatgaaggccaaaggtccagcagcagctaaggca
gaagaggacaagaagaaagggctggcactgtttggacaaaaaccacaaactcctaaattt
ctgcgagccttcggaggaaccattaacaagaccctgattgacaaagtcaaggtaagacat
gctgtcattcatttcccgtaa
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