Oryzias melastigma (Indian medaka): 112151300
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Entry
112151300 CDS
T07439
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112151300 (pou6f2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112151300 (pou6f2)
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
FtsX_ECD
Homeobox_KN
HOCHOB
Motif
Other DBs
NCBI-GeneID:
112151300
NCBI-ProteinID:
XP_024135916
Ensembl:
ENSOMEG00000001949
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All DBs
Position
LG20:complement(5869314..5972754)
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AA seq
671 aa
AA seq
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MLTVQSPDGFQSSLQDPMITGQLSKPLLSLRSDMSAAELRADDKAATPDSDLNDEPLLLP
SDATDREGTPNKLYGIRDGSVQSDASSSPSEQSQLGQSHPGYPMGPQSLLVAQQLANAVG
GVMSGAAPGMNQPILIPFNAGGHLGGQQGLVLSLPTANIQSLVAAAAAGGIMTLPLQNLQ
ATSSLNSQLQHLQQLQQMQQHHQQQQQQHHHHQQSHSHTQNQLPSQHHITNQQHTSVPSP
SSTCSSTSGQPQHSPPHRPNQSPARSLPSPVTPPMPLPMNPLASPAAVAAAAAAMGSIAG
SQVFGNTLSNLQGATGQLVTNAQGQIIGTIPLMPNSAGPSSQSGGGNPALQVQPITPQLL
TNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQAQQAQTGAASSQPNLLHMPHRQ
SPLHQASSSSSTSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLT
QTQVGQALSAAEGPAYSQSAICRHTILRSHFFLPQEAQENTIGNSLTGKLNPGLLYPARF
EKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEI
LNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPDLGVATPMD
PLTDSLEELPK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgttcagagtccggatggattccagagctccctccaggatccgatgattaca
gggcagctgagcaagccgctgctctccctgcgcagcgacatgagcgcagcagaactccgg
gcggacgacaaagcggccaccccagacagcgatctgaacgatgagcccctgctcctgccc
tctgacgccacggacagagagggcactcccaacaagctttacgggatccgtgacggatcg
gtccagtccgacgccagcagcagtccgtccgagcagagccagctgggccagtctcaccca
ggttaccccatggggccacagtctctcttagtggcccagcaattggccaacgccgtcggt
ggtgtgatgtccggggcggcgcccggcatgaatcagcccatcctcatccccttcaacgcg
ggtggacacctgggcgggcagcagggcctggtgctctccctgcccacagccaacatccag
agcctggtggcggctgccgctgcggggggcatcatgacgctccccctccagaatctgcaa
gctacctcatcactcaactcccaactccagcacctgcagcagctccagcagatgcagcag
caccaccagcagcaacagcagcagcaccaccaccaccaacagagccactcccacactcag
aaccagctgccatcccagcatcacatcaccaaccagcagcacacctcggtcccatctccg
agctccacctgctcttccacgtccggacagccacagcattcgccgccgcaccggcccaac
cagtcgcccgctcgcagcctaccctcacctgtgactcccccaatgcctctgccgatgaat
cctctggccagcccggcagcagtagcagcagcggcagccgccatgggctccatcgcgggc
tcccaggtgtttggaaacaccctgtcgaacctgcaaggcgccactgggcagcttgtcacc
aatgcgcaaggacagataattggaacaatcccactgatgcccaactctgcagggccctcc
agccaatcagggggtggcaacccagcgctgcaggtacagccaattacacctcagcttctg
accaacgctcaaggccagatcatcgccacggtgatcggcaatcagatcctgcctgtcatc
aacacccagggaatcacgctgtcaccaatcaagcctggacagcagctgccgcaggctcag
caggcgcagacgggcgccgcatcgtcgcagcccaacctgctccacatgccccacaggcag
agccctctccaccaggcctcgtcgtcctcctccacctcctcgtcctcctcggcgctcagc
gtcgggcagctcgtcagcaatccgcagaccgcccccagtgaggtggacggggtcaacctg
gaggagatccgagaatttgccaaagcattcaagatccgccggctgtccctgggcctgacg
cagacgcaggtggggcaggcgctcagcgccgccgaggggccggcgtacagccagtctgcc
atctgcagacacaccatcctgagaagccactttttcctaccacaggaagcccaagagaac
actataggtaacagtctgacaggcaaactgaaccctggccttttatatcctgccaggttt
gagaagttggacatcacccctaaaagcgcccagaagattaagccggttctggagcgctgg
atggccgaggctgaagcccgccaccgatccggcatgcagaacctgactgagtttatcggc
agcgagccttcaaaaaaacgcaagcggaggacctctttcaccccgcaggctctggagatc
ctcaacagccactttgagaagaacacgcacccctccggacaggaaatgacggaaatagcc
gagaagctgaactatgacagggaggtggtgcgggtctggttctgcaacaagaggcaagcc
ttgaaaaacacaataaagcgcttgaaacagcccgacctgggagtggccacgcccatggac
cccctcactgactctctggaggagctccccaagtga
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