Oryzias melastigma (Indian medaka): 112151304
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Entry
112151304 CDS
T07439
Symbol
gli3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112151304 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112151304 (gli3)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112151304 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
112151304
NCBI-ProteinID:
XP_024135923
Ensembl:
ENSOMEG00000001241
LinkDB
All DBs
Position
LG20:complement(4840606..4997098)
Genome browser
AA seq
1594 aa
AA seq
DB search
METQSQASSAAEKKKRVETIVAAKGSSARSDISEKAVASSTTSNAEEESTGAPYHRERRN
AISSQTPGATDRSVNEEPSTSTEERPSLLKKELPGSLPHLADHAQLYRGSLFAMDPRNGY
LDSHYPQPQFFPSFHPPVPIDDRHTQGRYVYDPSPVAPLHVGPTLGPSPTFSDIPLIRIS
PQRNPSVGAESPFHPPHPYIHPYMDYIRSLHSSPSISVLSATRGLSPADATHTGLTTADY
YHQMALLAGHRSPYASDLLPSVASTAGATSASALHMEYLQAMENSRFSSPRLTGRPNRKR
PLPISPLSDHSFDLQMIRNSPTAIVNTLLNNSRSSSSTSGSYGHLSAGAISPALSFAYPP
TPVALHVHQHVIGRQPSIVSSAFGHSPPLVHPTPAFASQRPVPGIPPSGLNASERSAISN
ESAQAKPTSESAVSSTGDPMHHKRSKLKPEEELPSPGAVSGQDHPEGMTLVKEEGDKDES
KQEPEVVYETNCHWENCCREFDTQEQLVQHINNDHIHGEKKEFVCRWEECSREQKPFKAQ
YMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNA
SDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRPP
PQPREPGGNSQGRSPGQLGGYADQREYNHATSKQDECLQVKSIKTEKPMTSQPSPGSQST
CSSDQSPVSADPSGGVQLAVSAGRSPREGLEEDERAEGNEEEAEEECEGEPAPIMDSTVS
TATAAMVTLQARRSIGRPLRWMEHMKMERLKQVNGALPRLGPLSPTPPTKGSAVPNILGK
GSCLGRQWGVSAPQPSGHADLGSTELTVLGLLRDRRDSSGSGTSSAYLSSSRRSSGISPC
FSSRRSSQASQNEGNAAAAHHHRRLHNLSSTDSYDPISTDASRRSSEASQHGGGAGGGGG
GLLSGGGCGGLGGMGVAGGSRGMLSLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKT
RMAMMDEGGNNRCLPPLVRPPACGDAANSGCVGHAGYRRRVLYPGEGPLNGNRRASDPVK
MHAPEACSLPPVQRFNSLNNLHPLPPLAHHPEPRNFSLQNYTRSDGFFESGLQDYTSSIA
EHAALEALAMEGEGEVGLLLDDEDMLPDDLVQYLHSQVQMDNVSYNHNEDQAVREVGQHS
VEAFRTSGLGGAFPGSQNLQGSERKSPGKLPIQWNEVSSGSADRSPQRERNPLPQCGRWP
GTEHGSPSAPFGRFGNMVVQQQGPAGFQNSYVQADRLSGACGVNPAVKLETSPNSCMEMR
GAGNNATNPFGRSNFLQVPGGAPPQVQKQKQNPNTSWQVGNNLILGRAPLNNLPQGNAHC
HNRLPFAPHPPSNSSRNLMRSQQYLGPEGSGEMQPGFSQLQVQGGADQCFLACQVSGLKL
ENPDHGYLEENFADCLPDCKTSSMPVLEEQSLLDSIAESGGLGAAIENSGALPSPGTDQV
TSTVDGHVLGALDEGANLDFVAMLEDGYDQNSLVSGVLSPSMFQGLSRTSSRLTTPRASA
PFHSVAPGLNMAIGDMSSLLTSLAEESKFLAVMQ
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcccaggccagttcagcagctgagaagaagaagagggtggagaccatt
gtggctgctaagggctcatcagcacgcagtgacatcagcgagaaggcggtggcctccagc
accacctcaaacgcagaggaggagagtacaggcgcaccgtaccaccgtgagaggcgcaat
gccatcagctcccaaacgccgggcgccaccgacaggagcgtgaacgaggagccctccact
tccacagaggagcggccgtccctcctcaagaaggagcttcctggttccctgccccatctg
gcggaccatgcccagctgtacagaggctcgctgttcgccatggacccccgaaacggctac
ctagactcgcactatccgcagccacagttcttcccgtccttccaccctcctgtgccgata
gacgacagacatacccagggacgatacgtctacgatccctcccccgtggcccctcttcac
gtgggtccaacattggggccaagtccaactttctctgacatccccctcattcggatctca
ccccagcggaacccctctgtgggggcagagtcgcccttccaccctccacacccctacatc
cacccatacatggactacatccgctccctccacagcagcccctccatctctgttctgtca
gccacccgaggcctcagccctgcagatgcgactcacactggtctgacgaccgccgactac
taccaccagatggcgctgctggcagggcaccgcagcccgtacgccagcgacctcctgccg
tccgtggcgtccaccgcgggggccaccagtgccagcgccctccacatggagtatctgcag
gccatggagaattcccgcttctcgagtcccaggctcaccggccgacccaaccggaagcgg
cccctgcccatctcgccgctctccgatcacagcttcgacctgcagatgatccgcaactcg
cccaccgccatcgtcaacacgctgctcaacaactcgcgctccagctcctccaccagcggc
tcctacggtcacctgtctgccggcgccatcagcccggcgctgagcttcgcctaccctccg
accccggtggctctgcacgtgcaccagcacgtaattggccggcagccgagcatcgtgagc
tccgccttcggtcacagcccccccctggtgcacccgaccccggcctttgccagccagcga
cccgtgccaggcatccccccatccgggctcaacgccagcgagcgctcagccatctccaac
gagtccgcacaggccaaacccaccagcgagtccgccgtcagcagcaccggcgaccccatg
caccacaagaggtccaaactgaaacccgaggaggagctgccgagcccgggcgcggtgagc
ggacaggaccatcctgaggggatgacgctggtgaaggaggaaggagacaaggacgagagc
aagcaggagccggaggtggtttatgagaccaactgccactgggagaactgctgtcgagag
ttcgacacccaggagcagctcgtacaacacatcaacaacgaccacatccacggggagaag
aaggagtttgtgtgtcgctgggaggaatgctctcgagagcagaagcccttcaaagcccag
tacatgctggtggtccacatgcgcagacacaccggagagaagccacacaagtgcacgttc
gaaggctgcaccaaggcctactcccgtctggagaacctcaaaactcacctgcgctcccac
accggggagaagccgtacgtgtgcgaacacgagggctgcaacaaggcgttttccaacgct
tcggaccgagccaaacaccagaaccgcacgcactccaacgagaaaccgtacgtctgcaaa
atccccggctgcaccaaacgctacaccgatcccagctccctgcgcaagcacgtgaagacg
gtgcacgggcccgaggcgcacgtcaccaagaagcagcgcggggactacccccgcccccca
cctcagcccagggagcccgggggcaacagccagggccgctcgccggggcagctgggcggg
tacgcggaccaaagggagtacaaccacgctacctccaaacaggacgagtgtctgcaggtc
aagtccataaagaccgagaagcccatgacgtctcagccaagccctggcagtcagtctaca
tgcagcagtgaccagtcccccgtcagcgccgatcccagcggtggagtccagcttgctgtg
agcgctggacgctcgccaagggaggggctggaggaggacgagcgggcggagggcaacgaa
gaggaggcggaggaggagtgtgagggcgagccggctcccatcatggactccacggtctct
acggcgaccgcggctatggtgaccctgcaggccaggcgaagcatcggccgcccgctgcgc
tggatggaacacatgaagatggagaggctgaagcaggtgaacggagcgctgcccagactg
gggcccctgtcccccacaccgcccaccaaaggttctgcggtgcccaacatcttaggaaaa
ggatcctgtctgggccggcagtggggggtgtctgcccctcagccctccggtcacgcggac
ctggggagcacggagctgacggtgctgggcttgctccgagaccggcgtgacagcagcggc
agtggcaccagctccgcctacctgagcagcagccggcgctcctcgggcatctcgccgtgc
ttctccagccggcgctccagccaggcgtcgcagaacgagggcaacgcggcggccgcgcac
caccaccgccgcctccacaacctcagctccaccgactcctacgaccccatctccacggac
gcctcccgccgctccagcgaggccagccagcatggaggcggggcggggggaggtggtggg
ggcctgctctcaggtgggggttgcggaggcctcggggggatgggtgtcgctggggggtca
cgggggatgctcagcttaacacctgctcagcactaccacctgaaagccaagtacgccgcc
gccaccgggggtccccctcccacccctctacccaacatggagcgcatgagtctgaagacg
cgcatggccatgatggacgaggggggcaacaatcgctgtttgcctccgttagtgaggccg
ccggcctgtggggacgccgccaacagcggctgtgtgggtcacgccggctacaggaggagg
gtcctgtacccgggtgagggtccactgaacggcaaccggagggccagcgacccggtcaag
atgcatgctcctgaagcttgcagtttgcccccggtgcaacgcttcaacagcctcaacaac
ctccaccccctaccccccctggctcaccaccccgaaccacgcaacttcagcctccagaac
tacacgcgctcagacggcttctttgagtcgggccttcaggactacacctccagcattgcc
gagcacgccgctttagaagctctggccatggagggtgagggggaggtggggcttctgctg
gacgatgaggacatgctgcccgacgacctggtgcagtaccttcattcccaggttcagatg
gacaacgtctcctacaaccacaatgaagaccaagcagtcagggaggtcggccaacactcc
gtggaggcgttccgtacttcggggttgggcggggccttccccggatcccaaaatctgcaa
ggatcagagaggaagagccccgggaagctccccatccagtggaacgaagtgagttcgggc
agtgccgaccgatcgcctcagagggagcggaaccccctcccacagtgtggaaggtggccc
ggcacagagcacggatccccttccgcgcccttcggccggtttgggaacatggtggtgcag
caacagggacctgcgggattccagaacagctatgtccaggccgatcgactatcaggcgcc
tgcggcgtcaatcccgcagtcaagctggagacatctcccaactcctgcatggagatgaga
ggtgctggcaacaacgccacaaaccccttcgggaggtcaaacttcttgcaggtccctggc
ggggcccctccccaggtccaaaagcagaaacagaaccccaacacctcctggcaggttgga
aacaacctgatccttggcagggcccccctaaacaatctcccccaaggaaatgctcattgt
cacaacaggctgccgtttgcccctcatccgccctccaatagttctcggaacttgatgaga
agccagcagtacctcggtcctgaaggttctggtgaaatgcagccgggcttcagccagctt
caagtgcagggaggcgccgaccagtgctttcttgcatgtcaggtatctgggctgaaactg
gagaacccagaccatggatacttggaggagaactttgcggactgcctccccgattgcaag
acctcctcaatgcctgttctggaggaacagagcttgctggactccattgctgagtccgga
ggactcggcgccgccatcgagaactcaggggcacttccttcccccgggacagaccaagtc
accagcaccgtggacggccacgttctcggcgctttagacgagggggcgaatctggacttt
gtcgccatgctggaggacgggtacgaccagaacagtctggtctcgggggtactgagcccg
tccatgtttcaaggcctctccaggacctcgtcgcgcctcaccacccctcgggcgtcggcc
ccattccacagcgtggcccccggcctgaacatggccatcggcgacatgagctccctcctc
accagccttgcagaggagagcaagttcctagccgtcatgcagtag
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integrated database retrieval system
