Oryzias melastigma (Indian medaka): 112151361
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Entry
112151361 CDS
T07439
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112151361 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112151361 (ube3c)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112151361 (ube3c)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
HECT type E3
112151361 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
112151361
NCBI-ProteinID:
XP_024136016
Ensembl:
ENSOMEG00000004179
LinkDB
All DBs
Position
LG20:complement(7225782..7255539)
Genome browser
AA seq
1079 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERKRLKNAIIIQSYIRGYQ
DMKQQYAIQRAQFDSFVSQTQAGGAQHVLDSSDLCLLSRQLIFFYRQNLDSHRLIWLCQN
LVKHNNPFVKLLITPQKQTCMFQIRRILGFCCRLLQNSTDDSLNVAVPMRMLEVFSSEKT
YLSVIPDANYVALILEQILHYMVQKGYYRSLYILVNHRLPSSLEYSDAPSVPLASTLLEH
TLKPLHFTYSSCTKGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDCRLSFPFEAFLSS
LQGTVESSSAAQSQAPWLLYFVLFAGENRLGSLSEEGLLLYLRALQTLLPLLPVSESSSR
PEVSSGYLSDQTSALHLLQDNSRISVQQITEECIHKLDTKQQTNALLNLVWRDSASEDVF
TMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPLLQLI
SRGSPMSFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGHVQSSMMPFTLSELVT
LSRCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNNEVQQRIQAEQKRWVQLFKV
ITNLVKMVKARDIRRPFCPAGHWLSDEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQS
TLDVGLEPPQLSVSEERNLAILTELPFVVPFEERVKIFQRLIFADKRDVQGDGPFPDGIN
VTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSG
FNPNQGFFKTTNEGLLYPSPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASFFL
SKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEDDVEELGLNFTVVNNDLGEAQVVELKP
GGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEIQVLI
SGAHVPISLDDLKNFTNYSGGYTANHPVIQIFWEVVEGFTEEEKRKLLRFVTSCSRPPLL
GFKELHPAFCIHNGGSDLERLPTASTCMNLLKLPEFCDQHSMRSKLLYAIESSAGFELS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcttcgagggagatttcaaaacaagacccaaggtgtcacttggaggagcgagt
aaaaaggaggagaaagcatccctgttgcacagaactcaagaagaaaggagaaaaagagaa
gatgaaagaaaacgactgaagaatgccatcatcattcagtcgtacattcgtggctatcaa
gatatgaaacaacagtatgccattcagagagcccagtttgacagttttgtcagccagaca
caggcggggggagcccagcatgttctggacagttctgatctctgccttctatcaagacaa
ctgatatttttctacagacagaacctggattcacacagattgatatggttatgccagaac
ctggtgaaacacaacaatccgtttgtaaagctgttgatcacaccacagaagcagacatgt
atgtttcaaatcaggaggatcttgggcttctgctgcaggcttctgcaaaactccacagac
gacagtttaaatgttgcagttcccatgcgcatgctggaagtcttttcctcagagaaaaca
tatctttctgtaattccagatgctaactatgtagctttgatacttgagcagattttgcac
tatatggtacagaaaggatactacagatcgctgtacattctggtgaatcacaggcttccc
tccagtctggagtacagcgatgctccctctgtccctttggcaagcacattgttggagcac
acacttaagcctctgcactttacctactcctcttgcacaaaaggcgcaaggcaatttgta
tttgcagcttttaccgaggagtttatttctgccccgtttaccgagcagatctttcacttc
tttatcccggcgctctcggactgccgtctttcattcccattcgaggccttcctgagctcc
ctgcagggaacagtggaatcttcttctgcagcgcagagccaggcaccctggctgttgtat
tttgtcctttttgcaggagaaaaccgcttgggttcgctatcagaagagggcctcctgctc
taccttcgagctctgcagacgctgctgcctctactgccggtgtcggaaagctccagcaga
cctgaagtgagcagcgggtatctatcagatcaaacctctgctttgcatctcttgcaggat
aacagccggatttcggtgcagcagataacggaggaatgcatccacaagctggacacgaag
cagcagacgaacgcccttctgaacttggtctggagggattcggccagcgaggacgttttc
accatgatggcctccatctgtcacacgctcatggtgcagcaccgtctgatggtgcccaaa
gtcagacttctgtacagcttagctttcaatgcgcggttcctgcggcatctgtggcacctg
atcacctccatgaccaccaaaatgatcacaggctccatggtgcccttgctacagctaatc
tctcgggggtctcccatgtcgtttgaggactccaaccgcatcatcccgctcttctatctc
ttcagctccctgttcagccactcactcatctctgtgcatgacagcgagttttttgggcat
gaaatggaaggtcatgtacaatcctccatgatgcctttcacgctgtcagagctggtgact
ctttctcgctgtttgagagacgcgtgtctgggaatcatcaagctggcctaccccgaaacc
aaaacggagcacagagaggaatacatggctgctttccgcagtgtgggggtcaagaccaac
aatgaggtccagcagcggatccaggctgagcagaagcgatgggtgcagctcttcaaggtc
atcactaacctggtgaagatggtgaaagctcgtgacatcagacgacccttctgcccagca
ggtcactggctttctgatgaggtcaacatccgagcggataaggtcacacaactgtatgtg
ccttcagcaagacatgtgtggaggacaagaaggatgggacgtattgggcctcttcagtca
acacttgacgttggactggagcctccgcagctgtctgtgtctgaagagaggaacttggcc
atcttaacagaactcccatttgttgttccctttgaggagcgagtaaagatcttccagagg
ctcatctttgctgacaaacgggacgtgcagggcgacgggccgttccccgatggcatcaat
gtcaccatcagacgaaactacatctatgaggatgcttatgataagctctctccagaaaat
gaaccagacctgaagaagaggattcgtgtccacctgctgaacgctcacggtctggacgag
gcgggcatcgatggcggcggcatctttcgggagttcctcaacgagctcctcaagtcaggc
ttcaaccccaaccagggcttcttcaagacgacgaacgaggggctgctgtatcccagtccc
gcagcggagatgctggttggagactctttcacgagacactactatttcctgggcaggatt
cttggaaaggcgctgtatgagaacatgctggtggagttgccctttgccagtttctttctg
tccaagcttctgggaaccagcgcagacgtggacatccaccacctggcctccctggatcca
gagatgtaccgtaacctgctcttcctgaagagctacgaggacgacgtggaggagctcggc
ctcaacttcaccgtggttaacaacgatctgggagaagctcaggtggttgaactgaagcca
ggaggcaaagacattcctgtgaccacagcgaaccggatcgcttacatccatttggtggca
gactacaggctgaacaaacagatccgacctcattgcctggctttcagacagggtctggcc
aacgtggtcaacctcgagtggctgcggatgtttgatcagcaggagatccaggtgctgata
tctggagctcatgtaccaattagtcttgatgacctgaaaaacttcacaaactattcaggc
ggttacacagccaatcacccggtcatccagatcttctgggaagtggtagaaggattcaca
gaagaggaaaagcgtaaactcttgagatttgtcaccagctgttcccgacctccactgctt
ggctttaaggagctgcacccggccttctgcattcacaacggcggcagcgaccttgagcgt
ctccccaccgccagcacctgcatgaacctgctcaagctccccgagttctgtgaccagcac
tccatgaggagcaagctgctgtacgccatcgagtcatctgccggcttcgagctgagctga
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