Oryzias melastigma (Indian medaka): 112151390
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Entry
112151390 CDS
T07439
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112151390 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112151390 (pola1)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112151390 (pola1)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
112151390 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
112151390
NCBI-ProteinID:
XP_024136080
Ensembl:
ENSOMEG00000012492
LinkDB
All DBs
Position
LG20:11835484..11896422
Genome browser
AA seq
1461 aa
AA seq
DB search
MSPVSNTDKDVDATGSDDGGDACSLAKSRSRREKREKVGRKSALEQLKKAKMGEKIKYEV
EEFTHVYEEVDEEQYSKLVQERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVEKRGKGG
AKGAESKKTAKKAAVTKPNTIKSLFMNSNVKKPAEKDIDLSKDDLLGDILQDLHSEKPAV
LAPPPVVNLKKKKSLGSPMNPFSIRPQIPKESPTTGLKAKIVRPPPLEVRPPACPSPTLE
KSSKKVEKVKEEEEAENDSLALDEVDFDEPMEVESELKEEADVKPSVPAVKVEPKKEPPS
PGPLPSAVGGHWGQDEETGASEVPVEVQVDSSQLPLVEGEDGEPAFRFYWLDAFEDPYNQ
PGVVYLFGKVWIQSAKSHVSCCVTVKNIERTVYLLPREYKTNPKTGAVSAEPVGMMDVYQ
EFSELSEKFKVMKFKSKKVEKNYAFEIPDVPTQCDYLQIQYSAEFPALPPDLKGATFSHI
FGTNTSSLEHFLLSRKIKGPCWLDIKTPQMMNQPVSWCKVEALALRSDMISLVKDLPPPP
LTVMSISLKTVQNPKTHHNEIVSLAALLHYGFHMDKAPPQPPYQNYFCVISKPVDCIFPY
DFKEALRKKNGKVEIASTERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVLLQRINACKV
PHWSKIGRLRRANMPKLGGRGLFAEKNATCGRLVCDVEISAKELIRCKSYHLTELAAQVL
KVERVTVPQEEVKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVLPLALQITNIAGNVL
SRTLMGGRSERNEYLLLHAFHDKNYIVPDKPSFKKAQLETVEGEEDVDAGKGKRKKKAAY
SGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAQNSRRRTEEDESEEIP
EIPDPDLEMGILPKEIRKLVERRKQVKQLMKQQDINPDLYMQYDIRQKALKLTANSMYGC
LGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINTNSKSLEEVF
KLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEQHGDGRYSVKQELKGLDI
VRRDWCGLAKECGNYVIGQILSDQSRDIIVENIQKHLVEVGERVANGDIPLNLYEIHKAL
TKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYLICKDGSTLAASQRAYALEQLQ
KQEGLGVDTQYYLAQQIHPVVSRICEPIEGIDGVLIATWLGLDPSHFRSHQQHQREEEAD
GMLGGPVQLTDEERYRDCERFTFTCPSCGTDNIYDNVFDGAGNKLEPSLMRCCHVPCQSR
PIDYPVHISNKLLLDIRRHIKKYYSGWLVCEDQTCQNRTRRLPIAFSRHGPICPACTRAT
LRPEYSEKALYNQLCFYRFIFDWEHAVSKILTTDERTFVNQMNMQKDVYRKLKEVPEKAL
ATSGYSEVNLAKLFQAFSSLK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagtttcaaacacagataaagacgtggacgctacgggaagcgatgatggcggt
gatgcctgcagcctggccaagtctcgctccagacgagagaagagggagaaggttggcagg
aagtctgctctggagcagctcaagaaagccaagatgggggagaagatcaaatatgaggta
gaggagtttactcatgtgtatgaggaggtggatgaggagcagtactctaaattggtgcaa
gaaaggcaggaggacgactggattatcgacgatgatggtacgggatatgtggaggacgga
cgagaaatctttgatgatgatctggatgatgacgtggtggaaaagcgaggaaaaggtggc
gccaaaggagcggagtccaagaaaacggcgaagaaagctgcagtaaccaaacccaacacc
ataaagagccttttcatgaacagtaatgtgaaaaagcctgcagagaaggatattgattta
tctaaagatgacctgttaggagatatcctacaggatctgcactctgagaaaccagctgtt
ctggctcctcccccagtggtcaatctgaagaaaaagaagtctttgggatcccccatgaac
cccttctccatcagacctcagatccctaaggagtctcctacaacgggtttaaaggctaaa
atcgtccgtcctccacctttagaggtcagaccgccggcctgcccgtctcccactctggaa
aaaagcagcaagaaggtggaaaaagtaaaagaagaagaagaagcagagaacgactcactg
gcattggacgaggtggattttgatgaaccgatggaggtggagtctgagctcaaagaggaa
gctgacgtaaaaccctcagtgcctgcagttaaagttgagccaaagaaggagcccccgagt
ccaggtccccttccttccgcagttggaggtcattggggtcaagatgaggagactggagcg
agtgaagtccctgtggaagtgcaggtggactccagccagctgccgttggtggagggggaa
gacggagagccggcctttcgcttttattggctggacgcctttgaagacccgtacaaccaa
ccgggtgtggtctacctgtttggcaaagtgtggattcagtcggcgaagtctcacgtgagc
tgctgcgtcaccgtcaagaacattgagcggaccgtttaccttctgcctcgtgaatataaa
accaaccccaaaactggtgcggtgtcggccgagcccgtaggaatgatggacgtttaccaa
gaattcagcgagctctctgagaaatttaaggtcatgaagttcaaatccaagaaggtggag
aagaactacgcttttgaaattcctgatgtgcccactcagtgtgactacctgcagatccag
tactctgcagagtttcctgctctgccgcccgacctgaagggggcgaccttctcccacatt
tttggaacgaacacctccagtctggagcatttcctcctcagtaggaaaattaaaggtccc
tgttggttggatatcaaaacgccgcagatgatgaaccagccggtcagctggtgtaaggtg
gaggctttggctctgaggagtgacatgatctctttggtaaaagacctgccacctccgccg
ctcacggtcatgtccatcagcctcaagactgtacagaacccaaagacgcaccacaacgag
attgtgtccctcgctgccctccttcactatggcttccacatggacaaagctcctcctcag
cctccgtatcagaattatttctgcgtgatcagtaaaccggtcgactgcatcttcccttat
gacttcaaagaggctctaaggaagaagaacgggaaggtggagatcgcttcaacagagcgg
actctgctcggcttctttttggccaaaatgcacaaaatcgaccctgatgtgctggtgggt
cacgacatcttcggttttgatctggaagttctcctgcagaggatcaatgcgtgcaaagtt
ccccactggtctaaaattgggcgtctccggagagccaacatgcccaaattagggggtcga
ggtctcttcgcagagaagaatgcaacctgcggccgtttggtgtgtgatgtggagatatct
gccaaagagctgattcgctgcaaaagttaccacctgacagagctggcggctcaggtgctg
aaggtggagagagtgaccgtcccccaggaggaggtgaagaatctgtacagcgactctcct
cacctgctgtacctgctggagttgacgtggaccgacgccaagctgatcctccagatcatg
tgcgagctcaacgtgcttcctctggctctgcagatcaccaacatcgctggaaacgtcctg
tctcgcacattgatgggcggccgctctgagaggaacgagtacctgctgcttcacgctttc
cacgacaagaactacatcgtccccgacaaaccctcctttaagaaagctcagctggagacg
gttgaaggagaggaggatgtggatgcaggaaaaggaaaaaggaagaagaaggcagcgtat
tccgggggtctggttctggaccccaaagtgggtttctacgataagtttgtgctgcttcta
gacttcaacagcttgtatccctccatcatccaggagttcaacatttgcttcaccaccgtc
cagagggaggcccagaactcccgcaggaggactgaggaggatgaatccgaagaaattcca
gagattccggatcccgaccttgaaatgggaattctccctaaagaaatccggaagctggtt
gaacggcgtaaacaggtcaaacagctgatgaagcagcaggacatcaacccggatctgtac
atgcagtatgacatccgtcagaaggccctgaagctgacggctaacagcatgtatggctgc
ctgggattcagcttcagccgcttctacgcaaagcctctagctgctctggtgacgcacaaa
gggagagagattctgatgcacaccaaagacatggttcagaagatgaacctggaggtcatt
tatggagatacggactccatcatgatcaacaccaacagcaagtcccttgaagaagtcttc
aaacttggaaataaggtgaaggcagaagtgaacaagctgtacaagctcctcgagatcgac
atcgacggcgtgttcaagtcacttctgcttcttaagaagaagaaatatgcggcgctggtg
gtggagcaacacggcgatggacgctacagcgtgaagcaagagctcaaaggcttggacatc
gtccgcagagattggtgcggtttggccaaggagtgtggcaattacgtgattggtcagatc
ttgtccgaccagagtcgggacattattgtggagaacatccagaagcacctggtggaagtg
ggagagagggttgccaatggagacatacccctgaacctgtatgagatccacaaggccttg
acgaaggatcctcaagactacccggacaagaaaagtcttcctcacgtccacgtggctctg
tggatcaactctcagggcggtcgaagagttaaagctggagataccatctcttacctcatc
tgcaaggacggctccacgctagcagccagtcagagggcgtacgctctggagcagctgcag
aagcaggagggtctcggcgtggacacacagtactacctggcccagcagatccacccagtg
gtgtcccgcatctgtgagcccatcgagggcatcgacggcgtcctcatagcaacgtggctg
ggtctggacccgagtcacttccgatcccaccagcagcatcagagggaggaggaggctgac
ggcatgctgggaggtccggtccagctgaccgatgaggagcgctacagagactgtgagagg
tttaccttcacctgcccctcatgtggtaccgacaacatctacgacaatgtctttgatgga
gctggtaataagttggagcccagtttgatgcggtgctgtcatgttccctgtcagagtcgc
cccatcgactacccggtccacatcagcaacaaactcctactggacatccgtcgccatatt
aagaaatactactctggctggttggtgtgtgaggaccaaacctgccagaacaggaccagg
cgtttgcccatcgccttctcccgccatggccccatctgtcccgcctgcacccgagccaca
ctcagacctgagtactccgagaaggccctgtacaaccagctctgcttctacagattcatc
tttgactgggaacacgccgtttccaaaattctcactacggatgagagaacctttgtgaac
cagatgaacatgcagaaggacgtgtatcggaagctgaaggaggtgccagaaaaagccttg
gcgaccagcggatactcggaggtcaacctggccaaacttttccaagcgttctcctccctc
aagtaa
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