Oryzias melastigma (Indian medaka): 112151455
Help
Entry
112151455 CDS
T07439
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112151455 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112151455 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112151455 (gars1)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112151455 (gars1)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
112151455 (gars1)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112151455 (gars1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112151455 (gars1)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112151455 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
DUF3993
OS-D
Motif
Other DBs
NCBI-GeneID:
112151455
NCBI-ProteinID:
XP_024136177
LinkDB
All DBs
Position
LG20:8999581..9005577
Genome browser
AA seq
786 aa
AA seq
DB search
MTNLRMRIPELRVCNESALLERKLGLLRSVDFIILLSFMLLRSAASALLRTTAVTPTFCP
VSTVSAVLHLSRIPPRIRPFSTSVCLLKKKKLSAWLEVKGQTMDGNIEEILAPLRLAVKE
QGDLVRQMKENGAPDVDVTKAVAELKARKKTLEAKELALQPKDDIVDRSKMEDTLKRRFF
YDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQEEQILEIDCTMLTPEPVLKTSG
HVEKFADYMVKDVKNGECFRADHLLKAFLQKLMSDKKCSAEKKAEMESVIIQLDNYSQQE
LADLFVKYNVKSPTTGNDLTAPISFNLMFQTSIGPGGNMPGYLRPETAQGIFLNFKRLLE
FNQGKLPFAAAQIGNSFRNEISPRAGLIRVREFTMAEIEHFVDPSEKVHPKFSNVADLEI
TLYSSKAQTSGQSAQIMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGIAKDKLRFRQHM
DNEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLKCHARATKVPLVAEKPLKEPKTVN
VVQFEPNKGAIGKTYKKEAKLVMEYLAVCDECFITEQEQLLNETGEINIETEGKTFKLTK
DMVSVKRQQKTLHVEEVVPNVIEPSFGIGRIMYTIFEHTFHIREGDEQRTYFSFPATVAP
YKCSVLPLSPNQEFMPFVRELSEAMTKNGVSHKVDDSSGSIGRRYARTDEIGVAFGITID
FDTVNKTPHTATLRDRDSMRQIRAEVSKLPVIVRDLANGTMTWAEVESKFPIFEGQETSK
KEAAEE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctgcggatgcgtatccctgagctacgggtttgtaacgaaagtgctcttctg
gagcggaagttaggtttacttcgttcggtggatttcatcattctcctgagcttcatgctt
ctccgcagcgcggcatcagcactgctgaggaccaccgccgtgactcccactttctgcccg
gtgtcgacggtcagcgcggttctgcatttgtcccgtatcccgcccagaatccggccgttt
tcaacgtcggtctgcttgcttaagaagaagaagctgagcgcttggctggaggtgaaagga
caaaccatggacggaaacatagaagagattctcgctcctttgaggcttgcagtgaaggaa
cagggggacctggtgcgtcagatgaaagagaacggggctccagacgtggatgttactaaa
gctgtggctgagttgaaggccaggaagaagacactggaggcaaaggaactggcattgcaa
cccaaagatgacattgttgacagaagcaagatggaagacaccctcaagaggcgcttcttc
tacgatcaagccttcgcaatctatggaggtgtgagtgggctttatgacttcggccccgtg
ggctgtgccctgaagaacaacatcttgcaggcctggaggcagcacttcattcaggaggag
caaattctggaaatcgactgtaccatgctgacgcctgaacccgtcctcaagacttcagga
catgttgaaaaatttgcagactacatggttaaagacgtaaagaacggcgaatgcttcaga
gctgaccatctccttaaagcttttctccaaaagttgatgtcagataaaaaatgttcggca
gaaaagaaggcagagatggaaagcgtcatcattcagttggacaactactcccaacaagaa
cttgctgacctctttgtaaaatacaacgtcaagtcacccaccacaggaaatgacctcaca
gctcccatctcctttaacctaatgtttcagacgtccattggtccaggagggaatatgcca
ggctatctgaggccggaaactgctcagggaattttccttaacttcaagcgtctcttggag
ttcaaccagggaaaactgccatttgctgctgctcagataggaaactctttcaggaatgaa
atctctcctcgtgctggactcattcgtgttcgagagttcaccatggctgagatcgagcac
tttgtcgacccaagtgaaaaggtccatcccaagttctctaatgtagctgacctggaaatc
acgttgtactcctccaaagcccagaccagcggtcagtcggcacagatcatgaggctgggg
gacgccgtggagcagggagtgatcaataattcagtcttgggatattttattgggaggatc
tacctctacctgactaaagtcggcattgccaaagacaagctgcgtttcaggcagcacatg
gacaacgagatggctcactacgcctgcgactgctgggacgccgaatccaaaacctcctac
ggctggattgaaattgtgggctgtgctgaccggtcatgctatgatttgaaatgtcacgcg
cgagccacaaaggtccctctggtggctgagaagcctcttaaagaacccaaaactgtaaat
gttgtccagtttgagcccaacaaaggagccattgggaagacgtacaagaaggaagctaag
ctggtgatggagtatctggccgtgtgtgacgaatgcttcattactgagcaggagcagctg
ctgaatgaaaccggagagataaacatcgagactgaagggaagacattcaaactcacgaag
gacatggtgagcgtgaagcggcagcagaagactctgcacgtggaggaagttgttcccaac
gtcatcgagccttcctttggcatcggcaggatcatgtacaccatctttgagcatacattc
cacatcagagaaggagatgaacagagaacgtactttagctttcctgctactgtagctcca
tacaaatgttctgttctacctctgagcccgaatcaggaatttatgccctttgtgagggaa
ttatccgaggcaatgaccaaaaacggggtgtcgcataaggtggatgactcctctggctcc
attggaaggcgctacgccaggacagatgaaatcggcgtggcctttggcatcaccatcgac
tttgacaccgtgaacaagacccctcacacggccactttgagggaccgggactccatgagg
caaatccgagccgaggtcagcaagcttcctgtaatagtccgagatttggccaacggcaca
atgacctgggcagaagtggagagcaagtttcccatctttgagggccaagagaccagcaag
aaggaggcagctgaagagtaa
DBGET
integrated database retrieval system
